RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 LGI3Q8N145 548 aa9.99□□□□□ -0.81
CHMP1A-210ENST00000551981 TMEM229BQ8NBD8 167 aa9.99□□□□□ -0.81
CHMP1A-210ENST00000551981 OR4D10Q8NGI6 311 aa9.99□□□□□ -0.81
CHMP1A-210ENST00000551981 ZNRF2Q8NHG8 242 aa9.99□□□□□ -0.81
CHMP1A-210ENST00000551981 SLC35E1Q96K37 410 aa9.99□□□□□ -0.81
CHMP1A-210ENST00000551981 C16orf92Q96LL3 132 aa9.99□□□□□ -0.81
CHMP1A-210ENST00000551981 IGF2BP2-AS1Q96M15 143 aa9.99□□□□□ -0.81
CHMP1A-210ENST00000551981 DOK5Q9P104 306 aa9.99□□□□□ -0.81
CHMP1A-210ENST00000551981 SNRPGP15A8MWD9 76 aa9.98□□□□□ -0.81
CHMP1A-210ENST00000551981 NUDT3O95989 172 aa9.98□□□□□ -0.81
CHMP1A-210ENST00000551981 GPX4P36969 197 aaPredicted RBP9.98□□□□□ -0.81
CHMP1A-210ENST00000551981 NCS1P62166 190 aa9.98□□□□□ -0.81
CHMP1A-210ENST00000551981 ZNF90Q03938 601 aa9.98□□□□□ -0.81
CHMP1A-210ENST00000551981 SURF2Q15527 256 aaPredicted RBP9.98□□□□□ -0.81
CHMP1A-210ENST00000551981 GPR107Q5VW38 600 aa9.98□□□□□ -0.81
CHMP1A-210ENST00000551981 STEAP1BQ6NZ63 245 aa9.98□□□□□ -0.81
CHMP1A-210ENST00000551981 DTD1Q8TEA8 209 aa9.98□□□□□ -0.81
CHMP1A-210ENST00000551981 AP3S1Q92572 193 aa9.98□□□□□ -0.81
CHMP1A-210ENST00000551981 A0A087WXM4 84 aa9.97□□□□□ -0.81
CHMP1A-210ENST00000551981 F5H768 121 aa9.97□□□□□ -0.81
CHMP1A-210ENST00000551981 INSP01308 110 aa9.97□□□□□ -0.81
CHMP1A-210ENST00000551981 DEFB130BP0DP73 79 aa9.97□□□□□ -0.81
CHMP1A-210ENST00000551981 DEFB130AP0DP74 79 aa9.97□□□□□ -0.81
CHMP1A-210ENST00000551981 GALR1P47211 349 aa9.97□□□□□ -0.81
CHMP1A-210ENST00000551981 ATP5IP56385 69 aaPredicted RBP9.97□□□□□ -0.81
CHMP1A-210ENST00000551981 VBP1P61758 197 aa9.97□□□□□ -0.81
CHMP1A-210ENST00000551981 B2MP61769 119 aa9.97□□□□□ -0.81
CHMP1A-210ENST00000551981 OR4C16Q8NGL9 310 aa9.97□□□□□ -0.81
CHMP1A-210ENST00000551981 RTBDNQ9BSG5 229 aaPredicted RBP9.97□□□□□ -0.81
CHMP1A-210ENST00000551981 SCRT2Q9NQ03 307 aa9.97□□□□□ -0.81
CHMP1A-210ENST00000551981 EXTL2Q9UBQ6 330 aa9.97□□□□□ -0.81
CHMP1A-210ENST00000551981 TMEM56-RWDD3S4R434 201 aa9.97□□□□□ -0.81
CHMP1A-210ENST00000551981 CRYM-AS1A6NIL9 109 aa9.96□□□□□ -0.82
CHMP1A-210ENST00000551981 A8MTW9 85 aa9.96□□□□□ -0.82
CHMP1A-210ENST00000551981 GAMTQ14353 236 aa9.96□□□□□ -0.82
CHMP1A-210ENST00000551981 SPATA12Q7Z6I5 190 aa9.96□□□□□ -0.82
CHMP1A-210ENST00000551981 IL22RA2Q969J5 263 aa9.96□□□□□ -0.82
CHMP1A-210ENST00000551981 HSPB7Q9UBY9 170 aa9.96□□□□□ -0.82
CHMP1A-210ENST00000551981 IGKV1D-37A0A075B6S9 117 aa9.95□□□□□ -0.82
CHMP1A-210ENST00000551981 ZNF705GA8MUZ8 300 aaPredicted RBP9.95□□□□□ -0.82
CHMP1A-210ENST00000551981 DISC1C4P0D8 188 aa9.95□□□□□ -0.82
CHMP1A-210ENST00000551981 DUSP14O95147 198 aaKnown RBP9.95□□□□□ -0.82
CHMP1A-210ENST00000551981 ATP5G1P05496 136 aa9.95□□□□□ -0.82
CHMP1A-210ENST00000551981 TSPOP30536 169 aa9.95□□□□□ -0.82
CHMP1A-210ENST00000551981 ATP5G3P48201 142 aa9.95□□□□□ -0.82
CHMP1A-210ENST00000551981 CCR6P51684 374 aa9.95□□□□□ -0.82
CHMP1A-210ENST00000551981 SSBP1Q04837 148 aaKnown RBP9.95□□□□□ -0.82
CHMP1A-210ENST00000551981 OR2F1Q13607 317 aa9.95□□□□□ -0.82
CHMP1A-210ENST00000551981 CLINT1Q14677 625 aa9.95□□□□□ -0.82
CHMP1A-210ENST00000551981 AMTNQ6UX39 209 aa9.95□□□□□ -0.82
CHMP1A-210ENST00000551981 C20orf173Q96LM9 149 aa9.95□□□□□ -0.82
CHMP1A-210ENST00000551981 FUNDC2Q9BWH2 189 aa9.95□□□□□ -0.82
CHMP1A-210ENST00000551981 RBKSQ9H477 322 aa9.95□□□□□ -0.82
CHMP1A-210ENST00000551981 KCNIP3Q9Y2W7 256 aa9.95□□□□□ -0.82
CHMP1A-210ENST00000551981 CFDP00746 253 aaPredicted RBP9.94□□□□□ -0.82
CHMP1A-210ENST00000551981 SMCO1Q147U7 214 aa9.94□□□□□ -0.82
CHMP1A-210ENST00000551981 FAAP20Q6NZ36 180 aa9.94□□□□□ -0.82
CHMP1A-210ENST00000551981 GPR141Q7Z602 305 aa9.94□□□□□ -0.82
CHMP1A-210ENST00000551981 TRGV9Q99603 122 aa9.94□□□□□ -0.82
CHMP1A-210ENST00000551981 RSG1Q9BU20 258 aa9.94□□□□□ -0.82
CHMP1A-210ENST00000551981 SLC25A22Q9H936 323 aa9.94□□□□□ -0.82
CHMP1A-210ENST00000551981 LINC00588Q9Y4M8 146 aa9.94□□□□□ -0.82
CHMP1A-210ENST00000551981 CBY3A6NI87 242 aa9.93□□□□□ -0.82
CHMP1A-210ENST00000551981 M0R2Z0 102 aa9.93□□□□□ -0.82
CHMP1A-210ENST00000551981 S100A7P31151 101 aa9.93□□□□□ -0.82
CHMP1A-210ENST00000551981 CNN1P51911 297 aaKnown RBP9.93□□□□□ -0.82
CHMP1A-210ENST00000551981 MRPS10P82664 201 aaKnown RBP9.93□□□□□ -0.82
CHMP1A-210ENST00000551981 SPINK13Q1W4C9 94 aa9.93□□□□□ -0.82
CHMP1A-210ENST00000551981 TTC32Q5I0X7 151 aa9.93□□□□□ -0.82
CHMP1A-210ENST00000551981 GGNBP1Q5YKI7 109 aa9.93□□□□□ -0.82
CHMP1A-210ENST00000551981 OR11H7Q8NGC8 314 aa9.93□□□□□ -0.82
CHMP1A-210ENST00000551981 SLC25A32Q9H2D1 315 aa9.93□□□□□ -0.82
CHMP1A-210ENST00000551981 SLC45A2Q9UMX9 530 aa9.93□□□□□ -0.82
CHMP1A-210ENST00000551981 GPR132Q9UNW8 380 aa9.93□□□□□ -0.82
CHMP1A-210ENST00000551981 A0A0B4J2A0 478 aa9.92□□□□□ -0.82
CHMP1A-210ENST00000551981 ZNF182P17025 639 aaPredicted RBP9.92□□□□□ -0.82
CHMP1A-210ENST00000551981 RAB11AP62491 216 aa9.92□□□□□ -0.82
CHMP1A-210ENST00000551981 SSX7Q7RTT5 188 aa9.92□□□□□ -0.82
CHMP1A-210ENST00000551981 OR1B1Q8NGR6 318 aa9.92□□□□□ -0.82
CHMP1A-210ENST00000551981 OR1S1Q8NH92 325 aa9.92□□□□□ -0.82
CHMP1A-210ENST00000551981 GPR82Q96P67 336 aa9.92□□□□□ -0.82
CHMP1A-210ENST00000551981 PRRT1Q99946 306 aa9.92□□□□□ -0.82
CHMP1A-210ENST00000551981 SHPKQ9UHJ6 478 aa9.92□□□□□ -0.82
CHMP1A-210ENST00000551981 DMBT1Q9UGM3 2413 aaPredicted RBP9.91□□□□□ -0.82
CHMP1A-210ENST00000551981 ZNF98A6NK75 572 aa9.91□□□□□ -0.82
CHMP1A-210ENST00000551981 CRXO43186 299 aaPredicted RBP9.91□□□□□ -0.82
CHMP1A-210ENST00000551981 PRM2P04554 102 aa9.91□□□□□ -0.82
CHMP1A-210ENST00000551981 AKAIN1P0CW23 69 aa9.91□□□□□ -0.82
CHMP1A-210ENST00000551981 AKR1C4P17516 323 aa9.91□□□□□ -0.82
CHMP1A-210ENST00000551981 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.91□□□□□ -0.82
CHMP1A-210ENST00000551981 BAP18Q8IXM2 172 aa9.91□□□□□ -0.82
CHMP1A-210ENST00000551981 TMEM256Q8N2U0 113 aa9.91□□□□□ -0.82
CHMP1A-210ENST00000551981 THAP8Q8NA92 274 aa9.91□□□□□ -0.82
CHMP1A-210ENST00000551981 OR4D5Q8NGN0 318 aa9.91□□□□□ -0.82
CHMP1A-210ENST00000551981 RNF141Q8WVD5 230 aa9.91□□□□□ -0.82
CHMP1A-210ENST00000551981 Q9H8V8 135 aa9.91□□□□□ -0.82
CHMP1A-210ENST00000551981 PRR13Q9NZ81 148 aa9.91□□□□□ -0.82
CHMP1A-210ENST00000551981 PIGBOS1A0A0B4J2F0 54 aa9.9□□□□□ -0.82
CHMP1A-210ENST00000551981 BOLA2-SMG1P6H3BVE0 249 aa9.9□□□□□ -0.82
CHMP1A-210ENST00000551981 ANXA3P12429 323 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms