RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 HLA-EP13747 358 aa1.67□□□□□ -2.14
SNRPF-202ENST00000549580 MIFP14174 115 aa1.67□□□□□ -2.14
SNRPF-202ENST00000549580 S100GP29377 79 aa1.67□□□□□ -2.14
SNRPF-202ENST00000549580 INSL3P51460 131 aa1.67□□□□□ -2.14
SNRPF-202ENST00000549580 RHOGP84095 191 aa1.67□□□□□ -2.14
SNRPF-202ENST00000549580 FKBP1CQ5VVH2 108 aa1.67□□□□□ -2.14
SNRPF-202ENST00000549580 SOSTDC1Q6X4U4 206 aa1.67□□□□□ -2.14
SNRPF-202ENST00000549580 FP248Q71RG6 208 aaPredicted RBP1.67□□□□□ -2.14
SNRPF-202ENST00000549580 C3orf56Q8N813 242 aa1.67□□□□□ -2.14
SNRPF-202ENST00000549580 GRPEL2Q8TAA5 225 aa1.67□□□□□ -2.14
SNRPF-202ENST00000549580 LINC00467Q9BRT7 94 aa1.67□□□□□ -2.14
SNRPF-202ENST00000549580 NPCDR1Q9BY65 106 aa1.67□□□□□ -2.14
SNRPF-202ENST00000549580 C6orf62Q9GZU0 229 aaPredicted RBP1.67□□□□□ -2.14
SNRPF-202ENST00000549580 POPDC3Q9HBV1 291 aa1.67□□□□□ -2.14
SNRPF-202ENST00000549580 HS3ST2Q9Y278 367 aa1.67□□□□□ -2.14
SNRPF-202ENST00000549580 NDUFAF1Q9Y375 327 aa1.67□□□□□ -2.14
SNRPF-202ENST00000549580 UBR2Q8IWV8 1755 aa1.67□□□□□ -2.14
SNRPF-202ENST00000549580 SETD5Q9C0A6 1442 aa1.66□□□□□ -2.14
SNRPF-202ENST00000549580 COL5A3P25940 1745 aaPredicted RBP1.66□□□□□ -2.14
SNRPF-202ENST00000549580 ARHGEF28Q8N1W1 1705 aaKnown RBP1.66□□□□□ -2.14
SNRPF-202ENST00000549580 OVOL1O14753 267 aa1.66□□□□□ -2.14
SNRPF-202ENST00000549580 TIMM17BO60830 172 aa1.66□□□□□ -2.14
SNRPF-202ENST00000549580 GADD45GO95257 159 aa1.66□□□□□ -2.14
SNRPF-202ENST00000549580 PLCXD2Q0VAA5 305 aa1.66□□□□□ -2.14
SNRPF-202ENST00000549580 RTL8BQ17RB0 113 aa1.66□□□□□ -2.14
SNRPF-202ENST00000549580 RNASE10Q5GAN6 216 aaKnown RBP1.66□□□□□ -2.14
SNRPF-202ENST00000549580 C1orf140Q5VVS0 124 aa1.66□□□□□ -2.14
SNRPF-202ENST00000549580 TEX47Q8TBZ9 253 aa1.66□□□□□ -2.14
SNRPF-202ENST00000549580 Q96M85 177 aa1.66□□□□□ -2.14
SNRPF-202ENST00000549580 ADAT1Q9BUB4 502 aaKnown RBP1.66□□□□□ -2.14
SNRPF-202ENST00000549580 OR5AC2Q9NZP5 309 aa1.66□□□□□ -2.14
SNRPF-202ENST00000549580 OR52A1Q9UKL2 312 aa1.66□□□□□ -2.14
SNRPF-202ENST00000549580 NUBP2Q9Y5Y2 271 aa1.66□□□□□ -2.14
SNRPF-202ENST00000549580 STRCQ7RTU9 1775 aa1.66□□□□□ -2.14
SNRPF-202ENST00000549580 GBF1Q92538 1859 aa1.66□□□□□ -2.14
SNRPF-202ENST00000549580 FN1P02751 2386 aaKnown RBP1.66□□□□□ -2.14
SNRPF-202ENST00000549580 CCDC88CQ9P219 2028 aa1.66□□□□□ -2.14
SNRPF-202ENST00000549580 CAMSAP2Q08AD1 1489 aa1.65□□□□□ -2.15
SNRPF-202ENST00000549580 TRGV2A0A075B6R0 118 aa1.65□□□□□ -2.15
SNRPF-202ENST00000549580 TRAV14DV4A0A0A6YYC5 116 aa1.65□□□□□ -2.15
SNRPF-202ENST00000549580 ZNF705BP0CI00 300 aaPredicted RBP1.65□□□□□ -2.15
SNRPF-202ENST00000549580 SSR2P43308 183 aa1.65□□□□□ -2.15
SNRPF-202ENST00000549580 TMBIM6P55061 237 aa1.65□□□□□ -2.15
SNRPF-202ENST00000549580 TOMM20LQ6UXN7 152 aa1.65□□□□□ -2.15
SNRPF-202ENST00000549580 LINC00311Q8N616 119 aa1.65□□□□□ -2.15
SNRPF-202ENST00000549580 LINC00301Q8NCQ3 95 aa1.65□□□□□ -2.15
SNRPF-202ENST00000549580 SKA2Q8WVK7 121 aaPredicted RBP1.65□□□□□ -2.15
SNRPF-202ENST00000549580 PYDC1Q8WXC3 89 aa1.65□□□□□ -2.15
SNRPF-202ENST00000549580 ISOC1Q96CN7 298 aa1.65□□□□□ -2.15
SNRPF-202ENST00000549580 ZNF714Q96N38 554 aa1.65□□□□□ -2.15
SNRPF-202ENST00000549580 EFCAB11Q9BUY7 163 aa1.65□□□□□ -2.15
SNRPF-202ENST00000549580 C14orf132Q9NPU4 83 aa1.65□□□□□ -2.15
SNRPF-202ENST00000549580 DOCK4Q8N1I0 1966 aa1.65□□□□□ -2.15
SNRPF-202ENST00000549580 KRTAP12-4P60329 112 aa1.64□□□□□ -2.15
SNRPF-202ENST00000549580 TMEM128Q5BJH2 165 aa1.64□□□□□ -2.15
SNRPF-202ENST00000549580 SAMD13Q5VXD3 122 aa1.64□□□□□ -2.15
SNRPF-202ENST00000549580 ZNF418Q8TF45 676 aaPredicted RBP1.64□□□□□ -2.15
SNRPF-202ENST00000549580 BORCS8Q96FH0 119 aa1.64□□□□□ -2.15
SNRPF-202ENST00000549580 RMND5BQ96G75 393 aaPredicted RBP1.64□□□□□ -2.15
SNRPF-202ENST00000549580 LAMTOR2Q9Y2Q5 125 aa1.64□□□□□ -2.15
SNRPF-202ENST00000549580 ZCCHC11Q5TAX3 1644 aaKnown RBP1.64□□□□□ -2.15
SNRPF-202ENST00000549580 SBF1O95248 1867 aa1.64□□□□□ -2.15
SNRPF-202ENST00000549580 TRAV5A0A0B4J249 113 aa1.63□□□□□ -2.15
SNRPF-202ENST00000549580 TRBV6-5A0A0K0K1A5 114 aa1.63□□□□□ -2.15
SNRPF-202ENST00000549580 J3QKU1 62 aa1.63□□□□□ -2.15
SNRPF-202ENST00000549580 CST7O76096 145 aa1.63□□□□□ -2.15
SNRPF-202ENST00000549580 FAM107AO95990 144 aa1.63□□□□□ -2.15
SNRPF-202ENST00000549580 IFNA4P05014 189 aa1.63□□□□□ -2.15
SNRPF-202ENST00000549580 CXCL1P09341 107 aa1.63□□□□□ -2.15
SNRPF-202ENST00000549580 NBEAP1P0C6P0 100 aa1.63□□□□□ -2.15
SNRPF-202ENST00000549580 BRS3P32247 399 aa1.63□□□□□ -2.15
SNRPF-202ENST00000549580 ARPP19P56211 112 aa1.63□□□□□ -2.15
SNRPF-202ENST00000549580 ANGPTL5Q86XS5 388 aa1.63□□□□□ -2.15
SNRPF-202ENST00000549580 OR2T35Q8NGX2 323 aa1.63□□□□□ -2.15
SNRPF-202ENST00000549580 SFT2D1Q8WV19 159 aa1.63□□□□□ -2.15
SNRPF-202ENST00000549580 ZNF625Q96I27 306 aaPredicted RBP1.63□□□□□ -2.15
SNRPF-202ENST00000549580 C19orf12Q9NSK7 152 aa1.63□□□□□ -2.15
SNRPF-202ENST00000549580 HSPB11Q9Y547 144 aa1.63□□□□□ -2.15
SNRPF-202ENST00000549580 LY96Q9Y6Y9 160 aa1.63□□□□□ -2.15
SNRPF-202ENST00000549580 DOCK10Q96BY6 2186 aa1.63□□□□□ -2.15
SNRPF-202ENST00000549580 CD109Q6YHK3 1445 aa1.63□□□□□ -2.15
SNRPF-202ENST00000549580 TAF1LQ8IZX4 1826 aa1.63□□□□□ -2.15
SNRPF-202ENST00000549580 NCAPD3P42695 1498 aa1.63□□□□□ -2.15
SNRPF-202ENST00000549580 CEP164Q9UPV0 1460 aa1.63□□□□□ -2.15
SNRPF-202ENST00000549580 ODAMA1E959 279 aa1.62□□□□□ -2.15
SNRPF-202ENST00000549580 PRORSD1PA6NEY8 169 aa1.62□□□□□ -2.15
SNRPF-202ENST00000549580 C2orf70A6NJV1 201 aa1.62□□□□□ -2.15
SNRPF-202ENST00000549580 OR1I1O60431 355 aa1.62□□□□□ -2.15
SNRPF-202ENST00000549580 HIST1H2BKO60814 126 aa1.62□□□□□ -2.15
SNRPF-202ENST00000549580 HIST1H2BJP06899 126 aa1.62□□□□□ -2.15
SNRPF-202ENST00000549580 BCL2P10415 239 aa1.62□□□□□ -2.15
SNRPF-202ENST00000549580 MSMO1Q15800 293 aa1.62□□□□□ -2.15
SNRPF-202ENST00000549580 PRR15Q8IV56 129 aa1.62□□□□□ -2.15
SNRPF-202ENST00000549580 Q8IYB0 196 aa1.62□□□□□ -2.15
SNRPF-202ENST00000549580 C12orf29Q8N999 325 aa1.62□□□□□ -2.15
SNRPF-202ENST00000549580 OR9Q1Q8NGQ5 310 aa1.62□□□□□ -2.15
SNRPF-202ENST00000549580 OR4K15Q8NH41 348 aa1.62□□□□□ -2.15
SNRPF-202ENST00000549580 CARD19Q96LW7 228 aa1.62□□□□□ -2.15
SNRPF-202ENST00000549580 OR2H1Q9GZK4 316 aa1.62□□□□□ -2.15
SNRPF-202ENST00000549580 CACYBPQ9HB71 228 aaKnown RBP1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms