RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 ACTL10Q5JWF8 245 aa11.6□□□□□ -0.55
DDX54-205ENST00000548786 Q6ZWC4 215 aa11.6□□□□□ -0.55
DDX54-205ENST00000548786 BPIFCQ8NFQ6 507 aa11.6□□□□□ -0.55
DDX54-205ENST00000548786 OR10P1Q8NGE3 313 aa11.6□□□□□ -0.55
DDX54-205ENST00000548786 C2orf50Q96LR7 162 aa11.6□□□□□ -0.55
DDX54-205ENST00000548786 MGAT4CQ9UBM8 478 aa11.6□□□□□ -0.55
DDX54-205ENST00000548786 PFDN2Q9UHV9 154 aa11.6□□□□□ -0.55
DDX54-205ENST00000548786 STARD9Q9P2P6 4700 aa11.6□□□□□ -0.55
DDX54-205ENST00000548786 DYNC2H1Q8NCM8 4307 aaKnown RBP11.59□□□□□ -0.55
DDX54-205ENST00000548786 A0A0J9YWU9 116 aa11.59□□□□□ -0.55
DDX54-205ENST00000548786 SIX6O95475 246 aa11.59□□□□□ -0.55
DDX54-205ENST00000548786 IL5P05113 134 aa11.59□□□□□ -0.55
DDX54-205ENST00000548786 NUP62P37198 522 aaPredicted RBP11.59□□□□□ -0.55
DDX54-205ENST00000548786 CAV2P51636 162 aa11.59□□□□□ -0.55
DDX54-205ENST00000548786 DLK1P80370 383 aa11.59□□□□□ -0.55
DDX54-205ENST00000548786 SLC38A11Q08AI6 406 aa11.59□□□□□ -0.55
DDX54-205ENST00000548786 CYP2G1PQ6ZSU1 146 aa11.59□□□□□ -0.55
DDX54-205ENST00000548786 TMEM144Q7Z5S9 345 aa11.59□□□□□ -0.55
DDX54-205ENST00000548786 RNF183Q96D59 192 aa11.59□□□□□ -0.55
DDX54-205ENST00000548786 AGRNO00468 2067 aa11.59□□□□□ -0.55
DDX54-205ENST00000548786 GOSR2O14653 212 aa11.58□□□□□ -0.56
DDX54-205ENST00000548786 TAS2R30P59541 319 aa11.58□□□□□ -0.56
DDX54-205ENST00000548786 DEFB1P60022 68 aa11.58□□□□□ -0.56
DDX54-205ENST00000548786 OR8I2Q8N0Y5 310 aa11.58□□□□□ -0.56
DDX54-205ENST00000548786 LINC00052Q96N35 136 aa11.58□□□□□ -0.56
DDX54-205ENST00000548786 GPN1Q9HCN4 374 aaPredicted RBP11.58□□□□□ -0.56
DDX54-205ENST00000548786 RYR3Q15413 4870 aa11.57□□□□□ -0.56
DDX54-205ENST00000548786 FAM24AA6NFZ4 105 aa11.57□□□□□ -0.56
DDX54-205ENST00000548786 INMT-MINDY4F8WBC2 141 aa11.57□□□□□ -0.56
DDX54-205ENST00000548786 CST7O76096 145 aa11.57□□□□□ -0.56
DDX54-205ENST00000548786 LINC00869P0C866 280 aa11.57□□□□□ -0.56
DDX54-205ENST00000548786 SNRPD3P62318 126 aaKnown RBP11.57□□□□□ -0.56
DDX54-205ENST00000548786 EWSR1Q01844 656 aaKnown RBP eCLIP11.57□□□□□ -0.56
DDX54-205ENST00000548786 RAB32Q13637 225 aa11.57□□□□□ -0.56
DDX54-205ENST00000548786 TRPT1Q86TN4 253 aaKnown RBP11.57□□□□□ -0.56
DDX54-205ENST00000548786 TMEM217Q8N7C4 229 aa11.57□□□□□ -0.56
DDX54-205ENST00000548786 TMEM147Q9BVK8 224 aa11.57□□□□□ -0.56
DDX54-205ENST00000548786 SCRT1Q9BWW7 348 aa11.57□□□□□ -0.56
DDX54-205ENST00000548786 SLC25A32Q9H2D1 315 aa11.57□□□□□ -0.56
DDX54-205ENST00000548786 TP53TG1Q9Y2A0 90 aa11.57□□□□□ -0.56
DDX54-205ENST00000548786 CFDP00746 253 aaPredicted RBP11.56□□□□□ -0.56
DDX54-205ENST00000548786 OR5G3P0C626 314 aa11.56□□□□□ -0.56
DDX54-205ENST00000548786 DEFA1P59665 94 aa11.56□□□□□ -0.56
DDX54-205ENST00000548786 DEFA3P59666 94 aa11.56□□□□□ -0.56
DDX54-205ENST00000548786 PMS2P11Q13670 270 aa11.56□□□□□ -0.56
DDX54-205ENST00000548786 FBXL17Q9UF56 701 aa11.56□□□□□ -0.56
DDX54-205ENST00000548786 ZNF98A6NK75 572 aa11.55□□□□□ -0.56
DDX54-205ENST00000548786 IGKV3-20P01619 116 aa11.55□□□□□ -0.56
DDX54-205ENST00000548786 PVALBP20472 110 aaPredicted RBP11.55□□□□□ -0.56
DDX54-205ENST00000548786 C4BPBP20851 252 aa11.55□□□□□ -0.56
DDX54-205ENST00000548786 C1orf194Q5T5A4 169 aa11.55□□□□□ -0.56
DDX54-205ENST00000548786 TEPPQ6URK8 271 aa11.55□□□□□ -0.56
DDX54-205ENST00000548786 UHRF2Q96PU4 802 aa11.55□□□□□ -0.56
DDX54-205ENST00000548786 RARRES2Q99969 163 aa11.55□□□□□ -0.56
DDX54-205ENST00000548786 ARL6Q9H0F7 186 aa11.55□□□□□ -0.56
DDX54-205ENST00000548786 C11orf1Q9H5F2 150 aa11.55□□□□□ -0.56
DDX54-205ENST00000548786 NPVFQ9HCQ7 196 aa11.55□□□□□ -0.56
DDX54-205ENST00000548786 CLEC5AQ9NY25 188 aa11.55□□□□□ -0.56
DDX54-205ENST00000548786 HIGD1AQ9Y241 93 aa11.55□□□□□ -0.56
DDX54-205ENST00000548786 IGSF23A1L1A6 192 aa11.54□□□□□ -0.56
DDX54-205ENST00000548786 DEFB4AO15263 64 aa11.54□□□□□ -0.56
DDX54-205ENST00000548786 HYPMO75409 117 aa11.54□□□□□ -0.56
DDX54-205ENST00000548786 RAP2BP61225 183 aa11.54□□□□□ -0.56
DDX54-205ENST00000548786 LRRC37A5PQ49AS3 106 aa11.54□□□□□ -0.56
DDX54-205ENST00000548786 GDF5OSQ5U4N7 250 aa11.54□□□□□ -0.56
DDX54-205ENST00000548786 OR11H2Q8NH07 326 aa11.54□□□□□ -0.56
DDX54-205ENST00000548786 RSG1Q9BU20 258 aa11.54□□□□□ -0.56
DDX54-205ENST00000548786 SLC25A39Q9BZJ4 359 aaPredicted RBP11.54□□□□□ -0.56
DDX54-205ENST00000548786 H3BRN7 92 aa11.53□□□□□ -0.56
DDX54-205ENST00000548786 AGPAT2O15120 278 aa11.53□□□□□ -0.56
DDX54-205ENST00000548786 PRAF2O60831 178 aa11.53□□□□□ -0.56
DDX54-205ENST00000548786 DEDDO75618 318 aa11.53□□□□□ -0.56
DDX54-205ENST00000548786 GIG44P09565 113 aaPredicted RBP11.53□□□□□ -0.56
DDX54-205ENST00000548786 ID1P41134 155 aa11.53□□□□□ -0.56
DDX54-205ENST00000548786 GALR1P47211 349 aa11.53□□□□□ -0.56
DDX54-205ENST00000548786 FGL1Q08830 312 aa11.53□□□□□ -0.56
DDX54-205ENST00000548786 IL15RAQ13261 267 aa11.53□□□□□ -0.56
DDX54-205ENST00000548786 IL17DQ8TAD2 202 aa11.53□□□□□ -0.56
DDX54-205ENST00000548786 MGST2Q99735 147 aa11.53□□□□□ -0.56
DDX54-205ENST00000548786 UBE2L5PA0A1B0GUS4 154 aa11.52□□□□□ -0.57
DDX54-205ENST00000548786 CXorf65A6NEN9 183 aa11.52□□□□□ -0.57
DDX54-205ENST00000548786 FNDC10F2Z333 226 aa11.52□□□□□ -0.57
DDX54-205ENST00000548786 F6UB75 175 aa11.52□□□□□ -0.57
DDX54-205ENST00000548786 SOCS3O14543 225 aa11.52□□□□□ -0.57
DDX54-205ENST00000548786 SSNA1O43805 119 aa11.52□□□□□ -0.57
DDX54-205ENST00000548786 PSMB3P49720 205 aa11.52□□□□□ -0.57
DDX54-205ENST00000548786 SELENOTP62341 195 aa11.52□□□□□ -0.57
DDX54-205ENST00000548786 IGFL4Q6B9Z1 124 aa11.52□□□□□ -0.57
DDX54-205ENST00000548786 ZNF546Q86UE3 836 aa11.52□□□□□ -0.57
DDX54-205ENST00000548786 GATAD1Q8WUU5 269 aa11.52□□□□□ -0.57
DDX54-205ENST00000548786 C16orf92Q96LL3 132 aa11.52□□□□□ -0.57
DDX54-205ENST00000548786 C20orf173Q96LM9 149 aa11.52□□□□□ -0.57
DDX54-205ENST00000548786 MARVELD1Q9BSK0 173 aa11.52□□□□□ -0.57
DDX54-205ENST00000548786 SHANK2-AS3Q9BTD1 123 aa11.52□□□□□ -0.57
DDX54-205ENST00000548786 LYRM2Q9NU23 88 aaPredicted RBP11.52□□□□□ -0.57
DDX54-205ENST00000548786 SLC45A2Q9UMX9 530 aa11.52□□□□□ -0.57
DDX54-205ENST00000548786 H3BMM0 161 aa11.51□□□□□ -0.57
DDX54-205ENST00000548786 PRB4P10163 310 aaPredicted RBP11.51□□□□□ -0.57
DDX54-205ENST00000548786 SPP1P10451 314 aa11.51□□□□□ -0.57
DDX54-205ENST00000548786 SULT1A1P50225 295 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms