RNA–Protein interactions for RNA: ENST00000548434.1

RAPGEF3-217, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 695 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-217ENST00000548434 RNF126Q9BV68 326 aa11.47□□□□□ -0.57
RAPGEF3-217ENST00000548434 KRTAP17-1Q9BYP8 105 aa11.47□□□□□ -0.57
RAPGEF3-217ENST00000548434 TMED3Q9Y3Q3 217 aa11.47□□□□□ -0.57
RAPGEF3-217ENST00000548434 IGHV4-4A0A075B6R2 117 aa11.46□□□□□ -0.57
RAPGEF3-217ENST00000548434 FAUP35544 74 aaKnown RBP11.46□□□□□ -0.57
RAPGEF3-217ENST00000548434 NUP62P37198 522 aaPredicted RBP11.46□□□□□ -0.57
RAPGEF3-217ENST00000548434 PSMB3P49720 205 aa11.46□□□□□ -0.57
RAPGEF3-217ENST00000548434 OR2F1Q13607 317 aa11.46□□□□□ -0.57
RAPGEF3-217ENST00000548434 GGNBP1Q5YKI7 109 aa11.46□□□□□ -0.57
RAPGEF3-217ENST00000548434 AMTNQ6UX39 209 aa11.46□□□□□ -0.57
RAPGEF3-217ENST00000548434 FOXI2Q6ZQN5 318 aa11.46□□□□□ -0.57
RAPGEF3-217ENST00000548434 SLC35E1Q96K37 410 aa11.46□□□□□ -0.57
RAPGEF3-217ENST00000548434 PBDC1Q9BVG4 233 aa11.46□□□□□ -0.57
RAPGEF3-217ENST00000548434 C1QTNF4Q9BXJ3 329 aa11.46□□□□□ -0.57
RAPGEF3-217ENST00000548434 SRRQ9GZT4 340 aa11.46□□□□□ -0.57
RAPGEF3-217ENST00000548434 PIGBOS1A0A0B4J2F0 54 aa11.45□□□□□ -0.58
RAPGEF3-217ENST00000548434 SNRPGP15A8MWD9 76 aa11.45□□□□□ -0.58
RAPGEF3-217ENST00000548434 SYNGR2O43760 224 aa11.45□□□□□ -0.58
RAPGEF3-217ENST00000548434 AMBPP02760 352 aa11.45□□□□□ -0.58
RAPGEF3-217ENST00000548434 AP3S2P59780 193 aa11.45□□□□□ -0.58
RAPGEF3-217ENST00000548434 ZNF767PQ75MW2 155 aa11.45□□□□□ -0.58
RAPGEF3-217ENST00000548434 C1orf158Q8N1D5 194 aa11.45□□□□□ -0.58
RAPGEF3-217ENST00000548434 MAGT1Q9H0U3 335 aa11.45□□□□□ -0.58
RAPGEF3-217ENST00000548434 SLC45A2Q9UMX9 530 aa11.45□□□□□ -0.58
RAPGEF3-217ENST00000548434 DNAH11Q96DT5 4516 aa11.45□□□□□ -0.58
RAPGEF3-217ENST00000548434 A0A0J9YX75 114 aa11.44□□□□□ -0.58
RAPGEF3-217ENST00000548434 ISLRO14498 428 aa11.44□□□□□ -0.58
RAPGEF3-217ENST00000548434 LYZP61626 148 aa11.44□□□□□ -0.58
RAPGEF3-217ENST00000548434 NUTF2P61970 127 aaKnown RBP11.44□□□□□ -0.58
RAPGEF3-217ENST00000548434 RAB11AP62491 216 aa11.44□□□□□ -0.58
RAPGEF3-217ENST00000548434 BAK1Q16611 211 aa11.44□□□□□ -0.58
RAPGEF3-217ENST00000548434 SLC35B3Q9H1N7 401 aa11.44□□□□□ -0.58
RAPGEF3-217ENST00000548434 C9orf170A2RU37 121 aa11.43□□□□□ -0.58
RAPGEF3-217ENST00000548434 SMIM9A6NGZ8 99 aa11.43□□□□□ -0.58
RAPGEF3-217ENST00000548434 ZNF98A6NK75 572 aa11.43□□□□□ -0.58
RAPGEF3-217ENST00000548434 F6UB75 175 aa11.43□□□□□ -0.58
RAPGEF3-217ENST00000548434 WRBO00258 174 aa11.43□□□□□ -0.58
RAPGEF3-217ENST00000548434 MED6O75586 246 aa11.43□□□□□ -0.58
RAPGEF3-217ENST00000548434 VAMP1P23763 118 aa11.43□□□□□ -0.58
RAPGEF3-217ENST00000548434 GATA2P23769 480 aaPredicted RBP11.43□□□□□ -0.58
RAPGEF3-217ENST00000548434 BTCP35070 178 aa11.43□□□□□ -0.58
RAPGEF3-217ENST00000548434 UBE2MP61081 183 aaKnown RBP11.43□□□□□ -0.58
RAPGEF3-217ENST00000548434 OR4D5Q8NGN0 318 aa11.43□□□□□ -0.58
RAPGEF3-217ENST00000548434 CIB3Q96Q77 187 aaPredicted RBP11.43□□□□□ -0.58
RAPGEF3-217ENST00000548434 SLC25A32Q9H2D1 315 aa11.43□□□□□ -0.58
RAPGEF3-217ENST00000548434 NACAE9PAV3 2078 aa11.43□□□□□ -0.58
RAPGEF3-217ENST00000548434 DEFB131BA0A096LNP1 70 aa11.42□□□□□ -0.58
RAPGEF3-217ENST00000548434 TRAV8-2A0A0B4J237 113 aa11.42□□□□□ -0.58
RAPGEF3-217ENST00000548434 ZNF701M0R085 212 aaPredicted RBP11.42□□□□□ -0.58
RAPGEF3-217ENST00000548434 ADAP1O75689 374 aa11.42□□□□□ -0.58
RAPGEF3-217ENST00000548434 HOXB5P09067 269 aa11.42□□□□□ -0.58
RAPGEF3-217ENST00000548434 FXYD7P58549 80 aa11.42□□□□□ -0.58
RAPGEF3-217ENST00000548434 SPATA31B1PQ5VZV4 182 aa11.42□□□□□ -0.58
RAPGEF3-217ENST00000548434 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.42□□□□□ -0.58
RAPGEF3-217ENST00000548434 CENPSQ8N2Z9 138 aa11.42□□□□□ -0.58
RAPGEF3-217ENST00000548434 LINC00052Q96N35 136 aa11.42□□□□□ -0.58
RAPGEF3-217ENST00000548434 PCLOQ9Y6V0 5065 aa11.42□□□□□ -0.58
RAPGEF3-217ENST00000548434 A0A1B0GVY2 172 aa11.41□□□□□ -0.58
RAPGEF3-217ENST00000548434 NOL3O60936 208 aaKnown RBP11.41□□□□□ -0.58
RAPGEF3-217ENST00000548434 NDUFB6O95139 128 aa11.41□□□□□ -0.58
RAPGEF3-217ENST00000548434 CFDP00746 253 aaPredicted RBP11.41□□□□□ -0.58
RAPGEF3-217ENST00000548434 IGKV3-20P01619 116 aa11.41□□□□□ -0.58
RAPGEF3-217ENST00000548434 FABP1P07148 127 aa11.41□□□□□ -0.58
RAPGEF3-217ENST00000548434 ID1P41134 155 aa11.41□□□□□ -0.58
RAPGEF3-217ENST00000548434 PLP1P60201 277 aa11.41□□□□□ -0.58
RAPGEF3-217ENST00000548434 FAM78BQ5VT40 261 aa11.41□□□□□ -0.58
RAPGEF3-217ENST00000548434 TMEM144Q7Z5S9 345 aa11.41□□□□□ -0.58
RAPGEF3-217ENST00000548434 OR8I2Q8N0Y5 310 aa11.41□□□□□ -0.58
RAPGEF3-217ENST00000548434 DKK2Q9UBU2 259 aa11.41□□□□□ -0.58
RAPGEF3-217ENST00000548434 PFDN2Q9UHV9 154 aa11.41□□□□□ -0.58
RAPGEF3-217ENST00000548434 FLVCR2Q9UPI3 526 aa11.41□□□□□ -0.58
RAPGEF3-217ENST00000548434 CRXO43186 299 aaPredicted RBP11.4□□□□□ -0.58
RAPGEF3-217ENST00000548434 CCNKO75909 580 aa11.4□□□□□ -0.58
RAPGEF3-217ENST00000548434 POLR2GP62487 172 aaKnown RBP eCLIP11.4□□□□□ -0.58
RAPGEF3-217ENST00000548434 PSG9Q00887 426 aa11.4□□□□□ -0.58
RAPGEF3-217ENST00000548434 PLA2G2EQ9NZK7 142 aa11.4□□□□□ -0.58
RAPGEF3-217ENST00000548434 H3BP45 60 aa11.39□□□□□ -0.59
RAPGEF3-217ENST00000548434 SPANXN5Q5MJ07 72 aa11.39□□□□□ -0.59
RAPGEF3-217ENST00000548434 TMEM14EPQ6UXP3 125 aa11.39□□□□□ -0.59
RAPGEF3-217ENST00000548434 ACOT7LQ6ZUV0 252 aa11.39□□□□□ -0.59
RAPGEF3-217ENST00000548434 SMIM8Q96KF7 97 aa11.39□□□□□ -0.59
RAPGEF3-217ENST00000548434 RSG1Q9BU20 258 aa11.39□□□□□ -0.59
RAPGEF3-217ENST00000548434 TMEM189A5PLL7 270 aa11.38□□□□□ -0.59
RAPGEF3-217ENST00000548434 H3BRN7 92 aa11.38□□□□□ -0.59
RAPGEF3-217ENST00000548434 K7EPK0 472 aa11.38□□□□□ -0.59
RAPGEF3-217ENST00000548434 MRPS12O15235 138 aaKnown RBP11.38□□□□□ -0.59
RAPGEF3-217ENST00000548434 SPART-AS1P0CW21 52 aa11.38□□□□□ -0.59
RAPGEF3-217ENST00000548434 S100A5P33763 92 aa11.38□□□□□ -0.59
RAPGEF3-217ENST00000548434 MEOX2P50222 304 aa11.38□□□□□ -0.59
RAPGEF3-217ENST00000548434 OXA1LQ15070 435 aa11.38□□□□□ -0.59
RAPGEF3-217ENST00000548434 PATE2Q6UY27 113 aa11.38□□□□□ -0.59
RAPGEF3-217ENST00000548434 POM121L12Q8N7R1 296 aa11.38□□□□□ -0.59
RAPGEF3-217ENST00000548434 OR4B1Q8NGF8 309 aa11.38□□□□□ -0.59
RAPGEF3-217ENST00000548434 STRAPQ9Y3F4 350 aaKnown RBP11.38□□□□□ -0.59
RAPGEF3-217ENST00000548434 RFNGQ9Y644 331 aa11.38□□□□□ -0.59
RAPGEF3-217ENST00000548434 OR4E1P0C645 316 aa11.37□□□□□ -0.59
RAPGEF3-217ENST00000548434 RPP30P78346 268 aaKnown RBP11.37□□□□□ -0.59
RAPGEF3-217ENST00000548434 ARL16Q0P5N6 197 aa11.37□□□□□ -0.59
RAPGEF3-217ENST00000548434 SAMD13Q5VXD3 122 aa11.37□□□□□ -0.59
RAPGEF3-217ENST00000548434 IGFL4Q6B9Z1 124 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms