RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 DUX3Q96PT4 197 aa22.04■■□□□ 1.12
BRF1-213ENST00000548421 RNF2Q99496 336 aa22.04■■□□□ 1.12
BRF1-213ENST00000548421 C20orf24Q9BUV8 137 aa22.04■■□□□ 1.12
BRF1-213ENST00000548421 MRPL27Q9P0M9 148 aaKnown RBP22.04■■□□□ 1.12
BRF1-213ENST00000548421 FHITP49789 147 aa22.03■■□□□ 1.12
BRF1-213ENST00000548421 RHOBP62745 196 aa22.03■■□□□ 1.12
BRF1-213ENST00000548421 RABAC1Q9UI14 185 aa22.03■■□□□ 1.12
BRF1-213ENST00000548421 ZNF320A2RRD8 509 aa22.03■■□□□ 1.12
BRF1-213ENST00000548421 CCL24O00175 119 aa22.03■■□□□ 1.12
BRF1-213ENST00000548421 FHL3Q13643 280 aa22.03■■□□□ 1.12
BRF1-213ENST00000548421 FAM78BQ5VT40 261 aa22.03■■□□□ 1.12
BRF1-213ENST00000548421 UHRF2Q96PU4 802 aa22.03■■□□□ 1.12
BRF1-213ENST00000548421 ACTR3CQ9C0K3 210 aaPredicted RBP22.03■■□□□ 1.12
BRF1-213ENST00000548421 SEPSECSQ9HD40 501 aaKnown RBP22.03■■□□□ 1.12
BRF1-213ENST00000548421 A0A1W2PPV4 95 aa22.02■■□□□ 1.12
BRF1-213ENST00000548421 ZNF705EA8MWA4 302 aaPredicted RBP22.02■■□□□ 1.12
BRF1-213ENST00000548421 SEC14L6B5MCN3 397 aa22.02■■□□□ 1.12
BRF1-213ENST00000548421 RGS13O14921 159 aa22.02■■□□□ 1.12
BRF1-213ENST00000548421 CDC34P49427 236 aaPredicted RBP22.02■■□□□ 1.12
BRF1-213ENST00000548421 SLURP1P55000 103 aa22.02■■□□□ 1.12
BRF1-213ENST00000548421 LINC00305Q7Z4B0 112 aa22.02■■□□□ 1.12
BRF1-213ENST00000548421 S100A7AQ86SG5 101 aa22.02■■□□□ 1.12
BRF1-213ENST00000548421 C1QL4Q86Z23 238 aa22.02■■□□□ 1.12
BRF1-213ENST00000548421 LRRC20Q8TCA0 184 aa22.02■■□□□ 1.12
BRF1-213ENST00000548421 MRPL32Q9BYC8 188 aaKnown RBP22.02■■□□□ 1.12
BRF1-213ENST00000548421 REC114Q7Z4M0 266 aa22.01■■□□□ 1.11
BRF1-213ENST00000548421 METTL26Q96S19 204 aa22.01■■□□□ 1.11
BRF1-213ENST00000548421 SLC25A22Q9H936 323 aa22.01■■□□□ 1.11
BRF1-213ENST00000548421 FUT9Q9Y231 359 aa22.01■■□□□ 1.11
BRF1-213ENST00000548421 LGALS9O00182 355 aa22■■□□□ 1.11
BRF1-213ENST00000548421 S100A7P31151 101 aa22■■□□□ 1.11
BRF1-213ENST00000548421 SYNJ2BPP57105 145 aa22■■□□□ 1.11
BRF1-213ENST00000548421 KLF5Q13887 457 aaPredicted RBP22■■□□□ 1.11
BRF1-213ENST00000548421 SLC25A39Q9BZJ4 359 aaPredicted RBP22■■□□□ 1.11
BRF1-213ENST00000548421 ZNF726P1Q15940 193 aa21.99■■□□□ 1.11
BRF1-213ENST00000548421 ZNF747Q9BV97 191 aa21.99■■□□□ 1.11
BRF1-213ENST00000548421 UFC1Q9Y3C8 167 aa21.99■■□□□ 1.11
BRF1-213ENST00000548421 CTXND1A0A1B0GTU2 59 aa21.98■■□□□ 1.11
BRF1-213ENST00000548421 ZNF207O43670 478 aaKnown RBP21.98■■□□□ 1.11
BRF1-213ENST00000548421 NPPCP23582 126 aa21.98■■□□□ 1.11
BRF1-213ENST00000548421 KRTAP21-3Q3LHN1 58 aa21.98■■□□□ 1.11
BRF1-213ENST00000548421 SPATA31B1PQ5VZV4 182 aa21.98■■□□□ 1.11
BRF1-213ENST00000548421 MIR17HGQ75NE6 70 aa21.98■■□□□ 1.11
BRF1-213ENST00000548421 RAB24Q969Q5 203 aa21.98■■□□□ 1.11
BRF1-213ENST00000548421 SAT2Q96F10 170 aaPredicted RBP21.98■■□□□ 1.11
BRF1-213ENST00000548421 DAZ1Q9NQZ3 744 aaKnown RBP21.98■■□□□ 1.11
BRF1-213ENST00000548421 A8MWP6 167 aa21.97■■□□□ 1.11
BRF1-213ENST00000548421 H3BRN7 92 aa21.97■■□□□ 1.11
BRF1-213ENST00000548421 K7EMT4 169 aa21.97■■□□□ 1.11
BRF1-213ENST00000548421 CRYBB3P26998 211 aa21.97■■□□□ 1.11
BRF1-213ENST00000548421 C12orf54Q6X4T0 127 aa21.97■■□□□ 1.11
BRF1-213ENST00000548421 SSX7Q7RTT5 188 aa21.97■■□□□ 1.11
BRF1-213ENST00000548421 SHANK2-AS3Q9BTD1 123 aa21.97■■□□□ 1.11
BRF1-213ENST00000548421 PFDN2Q9UHV9 154 aa21.97■■□□□ 1.11
BRF1-213ENST00000548421 MYCNOSP40205 109 aa21.96■■□□□ 1.11
BRF1-213ENST00000548421 BLOC1S1P78537 153 aa21.96■■□□□ 1.11
BRF1-213ENST00000548421 MORN5Q5VZ52 161 aa21.96■■□□□ 1.11
BRF1-213ENST00000548421 H2AFB1P0C5Y9 115 aa21.96■■□□□ 1.11
BRF1-213ENST00000548421 C3orf56Q8N813 242 aa21.96■■□□□ 1.11
BRF1-213ENST00000548421 SCRT1Q9BWW7 348 aa21.96■■□□□ 1.11
BRF1-213ENST00000548421 EIF3GO75821 320 aaKnown RBP eCLIP21.95■■□□□ 1.1
BRF1-213ENST00000548421 TAS2R45P59539 299 aa21.95■■□□□ 1.1
BRF1-213ENST00000548421 RAB14P61106 215 aa21.95■■□□□ 1.1
BRF1-213ENST00000548421 TM4SF20Q53R12 229 aa21.95■■□□□ 1.1
BRF1-213ENST00000548421 DLX4Q92988 240 aaPredicted RBP21.95■■□□□ 1.1
BRF1-213ENST00000548421 NARS2Q96I59 477 aaKnown RBP21.95■■□□□ 1.1
BRF1-213ENST00000548421 TECRQ9NZ01 308 aaKnown RBP21.95■■□□□ 1.1
BRF1-213ENST00000548421 RNF24Q9Y225 148 aa21.95■■□□□ 1.1
BRF1-213ENST00000548421 MAP1LC3B2A6NCE7 125 aa21.94■■□□□ 1.1
BRF1-213ENST00000548421 ZNF98A6NK75 572 aa21.94■■□□□ 1.1
BRF1-213ENST00000548421 HMGB3O15347 200 aaKnown RBP21.94■■□□□ 1.1
BRF1-213ENST00000548421 C8orf88P0DMB2 117 aa21.94■■□□□ 1.1
BRF1-213ENST00000548421 MBD3L1Q8WWY6 194 aa21.94■■□□□ 1.1
BRF1-213ENST00000548421 MAP1LC3BQ9GZQ8 125 aa21.94■■□□□ 1.1
BRF1-213ENST00000548421 U3KQE9 123 aa21.94■■□□□ 1.1
BRF1-213ENST00000548421 COL6A5A8TX70 2615 aa21.94■■□□□ 1.1
BRF1-213ENST00000548421 WNK1Q9H4A3 2382 aa21.94■■□□□ 1.1
BRF1-213ENST00000548421 TMEM213A2RRL7 107 aa21.93■■□□□ 1.1
BRF1-213ENST00000548421 NMBP08949 121 aa21.93■■□□□ 1.1
BRF1-213ENST00000548421 STAG3L2P0CL84 134 aa21.93■■□□□ 1.1
BRF1-213ENST00000548421 STAG3L3P0CL85 134 aa21.93■■□□□ 1.1
BRF1-213ENST00000548421 KHDC3LQ587J8 217 aa21.93■■□□□ 1.1
BRF1-213ENST00000548421 LEMD1Q68G75 181 aa21.93■■□□□ 1.1
BRF1-213ENST00000548421 LCN15Q6UWW0 184 aa21.93■■□□□ 1.1
BRF1-213ENST00000548421 OR4F17Q8NGA8 305 aa21.93■■□□□ 1.1
BRF1-213ENST00000548421 SFT2D1Q8WV19 159 aa21.93■■□□□ 1.1
BRF1-213ENST00000548421 PCNPQ8WW12 178 aaKnown RBP21.93■■□□□ 1.1
BRF1-213ENST00000548421 OR4F4Q96R69 305 aa21.93■■□□□ 1.1
BRF1-213ENST00000548421 TRAV5A0A0B4J249 113 aa21.92■■□□□ 1.1
BRF1-213ENST00000548421 SLC25A2Q9BXI2 301 aa21.92■■□□□ 1.1
BRF1-213ENST00000548421 PEMTQ9UBM1 199 aa21.92■■□□□ 1.1
BRF1-213ENST00000548421 IGHV7-4-1A0A0J9YVY3 117 aa21.91■■□□□ 1.1
BRF1-213ENST00000548421 BUB3O43684 328 aa21.91■■□□□ 1.1
BRF1-213ENST00000548421 APOHP02749 345 aaPredicted RBP21.91■■□□□ 1.1
BRF1-213ENST00000548421 OR9G4Q8NGQ1 327 aa21.91■■□□□ 1.1
BRF1-213ENST00000548421 FAM167A-AS1Q96KT0 104 aa21.91■■□□□ 1.1
BRF1-213ENST00000548421 IGHV3-49A0A0A0MS15 119 aa21.9■■□□□ 1.1
BRF1-213ENST00000548421 PF4P02776 101 aa21.9■■□□□ 1.1
BRF1-213ENST00000548421 CLLU1Q5K131 121 aa21.9■■□□□ 1.1
BRF1-213ENST00000548421 IGHV3OR16-13A0A075B7E8 117 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms