RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 IL5P05113 134 aa10.19□□□□□ -0.78
PTCH1-217ENST00000548420 HNRNPCP07910 306 aaKnown RBP eCLIP10.19□□□□□ -0.78
PTCH1-217ENST00000548420 P2RY1P47900 373 aa10.19□□□□□ -0.78
PTCH1-217ENST00000548420 TAS2R30P59541 319 aa10.19□□□□□ -0.78
PTCH1-217ENST00000548420 ZNF90Q03938 601 aa10.19□□□□□ -0.78
PTCH1-217ENST00000548420 C16orf54Q6UWD8 224 aa10.19□□□□□ -0.78
PTCH1-217ENST00000548420 OR51G1Q8NGK1 321 aa10.19□□□□□ -0.78
PTCH1-217ENST00000548420 GLMPQ8WWB7 406 aa10.19□□□□□ -0.78
PTCH1-217ENST00000548420 FBXL17Q9UF56 701 aa10.19□□□□□ -0.78
PTCH1-217ENST00000548420 VPS13BQ7Z7G8 4022 aa10.19□□□□□ -0.78
PTCH1-217ENST00000548420 EPM2AB3EWF7 344 aa10.18□□□□□ -0.78
PTCH1-217ENST00000548420 IGLL5B9A064 214 aa10.18□□□□□ -0.78
PTCH1-217ENST00000548420 BUB3O43684 328 aa10.18□□□□□ -0.78
PTCH1-217ENST00000548420 MBPP02686 304 aaPredicted RBP10.18□□□□□ -0.78
PTCH1-217ENST00000548420 TMEM14EPQ6UXP3 125 aa10.18□□□□□ -0.78
PTCH1-217ENST00000548420 GBGT1Q8N5D6 347 aa10.18□□□□□ -0.78
PTCH1-217ENST00000548420 C12orf45Q8N5I9 185 aaPredicted RBP10.18□□□□□ -0.78
PTCH1-217ENST00000548420 NARS2Q96I59 477 aaKnown RBP10.18□□□□□ -0.78
PTCH1-217ENST00000548420 RAB40CQ96S21 281 aa10.18□□□□□ -0.78
PTCH1-217ENST00000548420 PSENENQ9NZ42 101 aa10.18□□□□□ -0.78
PTCH1-217ENST00000548420 TP53TG1Q9Y2A0 90 aa10.18□□□□□ -0.78
PTCH1-217ENST00000548420 RCL1Q9Y2P8 373 aaKnown RBP10.18□□□□□ -0.78
PTCH1-217ENST00000548420 IGKV3-7A0A075B6H7 116 aa10.17□□□□□ -0.78
PTCH1-217ENST00000548420 KIR2DL5BA0A0G2JN68 375 aa10.17□□□□□ -0.78
PTCH1-217ENST00000548420 KIR2DL5BA0A0G2JPC4 375 aa10.17□□□□□ -0.78
PTCH1-217ENST00000548420 ZFP92A6NM28 416 aa10.17□□□□□ -0.78
PTCH1-217ENST00000548420 H3BP45 60 aa10.17□□□□□ -0.78
PTCH1-217ENST00000548420 K7EQG2 157 aa10.17□□□□□ -0.78
PTCH1-217ENST00000548420 RBMY1CP0DJD4 496 aa10.17□□□□□ -0.78
PTCH1-217ENST00000548420 TFPI2P48307 235 aa10.17□□□□□ -0.78
PTCH1-217ENST00000548420 IL15RAQ13261 267 aa10.17□□□□□ -0.78
PTCH1-217ENST00000548420 DEFB135Q30KP9 77 aa10.17□□□□□ -0.78
PTCH1-217ENST00000548420 OR8G2PQ6IF36 304 aa10.17□□□□□ -0.78
PTCH1-217ENST00000548420 KIR2DL5AQ8N109 375 aa10.17□□□□□ -0.78
PTCH1-217ENST00000548420 KIR2DL5BQ8NHK3 375 aa10.17□□□□□ -0.78
PTCH1-217ENST00000548420 DCANP1Q8TF63 244 aa10.17□□□□□ -0.78
PTCH1-217ENST00000548420 RNF125Q96EQ8 232 aa10.17□□□□□ -0.78
PTCH1-217ENST00000548420 GRAMD2BQ96HH9 432 aa10.17□□□□□ -0.78
PTCH1-217ENST00000548420 MAP6D1Q9H9H5 199 aa10.17□□□□□ -0.78
PTCH1-217ENST00000548420 GSKIPQ9P0R6 139 aa10.17□□□□□ -0.78
PTCH1-217ENST00000548420 PAIP2BQ9ULR5 123 aaKnown RBP10.17□□□□□ -0.78
PTCH1-217ENST00000548420 C7orf66A4D0T2 115 aa10.16□□□□□ -0.78
PTCH1-217ENST00000548420 SNRPGP15A8MWD9 76 aa10.16□□□□□ -0.78
PTCH1-217ENST00000548420 FNDC10F2Z333 226 aa10.16□□□□□ -0.78
PTCH1-217ENST00000548420 DNASE2O00115 360 aaPredicted RBP10.16□□□□□ -0.78
PTCH1-217ENST00000548420 CCSO14618 274 aa10.16□□□□□ -0.78
PTCH1-217ENST00000548420 SSSCA1O60232 199 aa10.16□□□□□ -0.78
PTCH1-217ENST00000548420 TSC22D2O75157 780 aa10.16□□□□□ -0.78
PTCH1-217ENST00000548420 FABP1P07148 127 aa10.16□□□□□ -0.78
PTCH1-217ENST00000548420 LGALS9BQ3B8N2 356 aa10.16□□□□□ -0.78
PTCH1-217ENST00000548420 TMEM144Q7Z5S9 345 aa10.16□□□□□ -0.78
PTCH1-217ENST00000548420 APRG1Q8IVJ8 170 aa10.16□□□□□ -0.78
PTCH1-217ENST00000548420 FAM24BQ8N5W8 94 aa10.16□□□□□ -0.78
PTCH1-217ENST00000548420 STPG3Q8N7X2 389 aa10.16□□□□□ -0.78
PTCH1-217ENST00000548420 C11orf1Q9H5F2 150 aa10.16□□□□□ -0.78
PTCH1-217ENST00000548420 RABAC1Q9UI14 185 aa10.16□□□□□ -0.78
PTCH1-217ENST00000548420 HELTA6NFD8 242 aa10.15□□□□□ -0.78
PTCH1-217ENST00000548420 UBE2CO00762 179 aa10.15□□□□□ -0.78
PTCH1-217ENST00000548420 CFDP00746 253 aaPredicted RBP10.15□□□□□ -0.78
PTCH1-217ENST00000548420 EIF2B2P49770 351 aaKnown RBP10.15□□□□□ -0.78
PTCH1-217ENST00000548420 AP2S1P53680 142 aaPredicted RBP10.15□□□□□ -0.78
PTCH1-217ENST00000548420 RPL11P62913 178 aaKnown RBP10.15□□□□□ -0.78
PTCH1-217ENST00000548420 ZNF124Q15973 351 aa10.15□□□□□ -0.78
PTCH1-217ENST00000548420 ACOT7LQ6ZUV0 252 aa10.15□□□□□ -0.78
PTCH1-217ENST00000548420 Q6ZWC4 215 aa10.15□□□□□ -0.78
PTCH1-217ENST00000548420 NRARPQ7Z6K4 114 aa10.15□□□□□ -0.78
PTCH1-217ENST00000548420 TMEM217Q8N7C4 229 aa10.15□□□□□ -0.78
PTCH1-217ENST00000548420 C2orf50Q96LR7 162 aa10.15□□□□□ -0.78
PTCH1-217ENST00000548420 AGRNO00468 2067 aa10.14□□□□□ -0.79
PTCH1-217ENST00000548420 CCNKO75909 580 aa10.14□□□□□ -0.79
PTCH1-217ENST00000548420 APOC4P55056 127 aa10.14□□□□□ -0.79
PTCH1-217ENST00000548420 DLK1P80370 383 aa10.14□□□□□ -0.79
PTCH1-217ENST00000548420 C1orf194Q5T5A4 169 aa10.14□□□□□ -0.79
PTCH1-217ENST00000548420 TMEM182Q6ZP80 229 aaPredicted RBP10.14□□□□□ -0.79
PTCH1-217ENST00000548420 Q6ZR54 194 aa10.14□□□□□ -0.79
PTCH1-217ENST00000548420 ENKURQ8TC29 256 aa10.14□□□□□ -0.79
PTCH1-217ENST00000548420 MARVELD1Q9BSK0 173 aa10.14□□□□□ -0.79
PTCH1-217ENST00000548420 SEPSECSQ9HD40 501 aaKnown RBP10.14□□□□□ -0.79
PTCH1-217ENST00000548420 C5orf51A6NDU8 294 aa10.13□□□□□ -0.79
PTCH1-217ENST00000548420 K7EPK0 472 aa10.13□□□□□ -0.79
PTCH1-217ENST00000548420 SCGB1D2O95969 90 aa10.13□□□□□ -0.79
PTCH1-217ENST00000548420 METTL15P1P0C7V9 234 aa10.13□□□□□ -0.79
PTCH1-217ENST00000548420 NUP62P37198 522 aaPredicted RBP10.13□□□□□ -0.79
PTCH1-217ENST00000548420 DEFB131AP59861 70 aa10.13□□□□□ -0.79
PTCH1-217ENST00000548420 ARL16Q0P5N6 197 aa10.13□□□□□ -0.79
PTCH1-217ENST00000548420 OR2F1Q13607 317 aa10.13□□□□□ -0.79
PTCH1-217ENST00000548420 STXBP6Q8NFX7 210 aa10.13□□□□□ -0.79
PTCH1-217ENST00000548420 C11orf45Q8TAV5 145 aa10.13□□□□□ -0.79
PTCH1-217ENST00000548420 PFDN2Q9UHV9 154 aa10.13□□□□□ -0.79
PTCH1-217ENST00000548420 SLC45A2Q9UMX9 530 aa10.13□□□□□ -0.79
PTCH1-217ENST00000548420 FAM25EA8MYX2 175 aa10.12□□□□□ -0.79
PTCH1-217ENST00000548420 INMT-MINDY4F8WBC2 141 aa10.12□□□□□ -0.79
PTCH1-217ENST00000548420 PRAF2O60831 178 aa10.12□□□□□ -0.79
PTCH1-217ENST00000548420 TNP2Q05952 138 aa10.12□□□□□ -0.79
PTCH1-217ENST00000548420 GSG1LQ6UXU4 331 aa10.12□□□□□ -0.79
PTCH1-217ENST00000548420 SIGLEC15Q6ZMC9 328 aa10.12□□□□□ -0.79
PTCH1-217ENST00000548420 POM121L12Q8N7R1 296 aa10.12□□□□□ -0.79
PTCH1-217ENST00000548420 OR10P1Q8NGE3 313 aa10.12□□□□□ -0.79
PTCH1-217ENST00000548420 PBDC1Q9BVG4 233 aa10.12□□□□□ -0.79
PTCH1-217ENST00000548420 GGACTQ9BVM4 153 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms