RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 C9JCJ5 164 aa10.5□□□□□ -0.73
PTCH1-215ENST00000547672 IGHV4-59P01825 116 aa10.5□□□□□ -0.73
PTCH1-215ENST00000547672 OR10J4P0C629 311 aa10.5□□□□□ -0.73
PTCH1-215ENST00000547672 CD99P14209 185 aa10.5□□□□□ -0.73
PTCH1-215ENST00000547672 RPL7P18124 248 aaKnown RBP10.5□□□□□ -0.73
PTCH1-215ENST00000547672 SRP14P37108 136 aaKnown RBP10.5□□□□□ -0.73
PTCH1-215ENST00000547672 SUMO1P63165 101 aaKnown RBP10.5□□□□□ -0.73
PTCH1-215ENST00000547672 SLC35B1P78383 322 aa10.5□□□□□ -0.73
PTCH1-215ENST00000547672 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.5□□□□□ -0.73
PTCH1-215ENST00000547672 FXYD5Q96DB9 178 aa10.5□□□□□ -0.73
PTCH1-215ENST00000547672 ZNF503Q96F45 646 aa10.5□□□□□ -0.73
PTCH1-215ENST00000547672 BTF3L4Q96K17 158 aa10.5□□□□□ -0.73
PTCH1-215ENST00000547672 GSX1Q9H4S2 264 aaPredicted RBP10.5□□□□□ -0.73
PTCH1-215ENST00000547672 TRAV5A0A0B4J249 113 aa10.49□□□□□ -0.73
PTCH1-215ENST00000547672 LINC01548A6NM66 108 aa10.49□□□□□ -0.73
PTCH1-215ENST00000547672 H3BRN7 92 aa10.49□□□□□ -0.73
PTCH1-215ENST00000547672 CLDN34H7C241 214 aa10.49□□□□□ -0.73
PTCH1-215ENST00000547672 TSPAN4O14817 238 aa10.49□□□□□ -0.73
PTCH1-215ENST00000547672 CD5LO43866 347 aa10.49□□□□□ -0.73
PTCH1-215ENST00000547672 MEOX2P50222 304 aa10.49□□□□□ -0.73
PTCH1-215ENST00000547672 CNN1P51911 297 aaKnown RBP10.49□□□□□ -0.73
PTCH1-215ENST00000547672 TAS2R60P59551 318 aa10.49□□□□□ -0.73
PTCH1-215ENST00000547672 ADIRFQ15847 76 aa10.49□□□□□ -0.73
PTCH1-215ENST00000547672 BCL6BQ8N143 479 aaPredicted RBP10.49□□□□□ -0.73
PTCH1-215ENST00000547672 ARL6IP6Q8N6S5 226 aa10.49□□□□□ -0.73
PTCH1-215ENST00000547672 WFDC11Q8NEX6 87 aa10.49□□□□□ -0.73
PTCH1-215ENST00000547672 C20orf24Q9BUV8 137 aa10.49□□□□□ -0.73
PTCH1-215ENST00000547672 CRYBG3Q68DQ2 2970 aa10.49□□□□□ -0.73
PTCH1-215ENST00000547672 CR1P17927 2039 aa10.48□□□□□ -0.73
PTCH1-215ENST00000547672 PTPN13Q12923 2485 aa10.48□□□□□ -0.73
PTCH1-215ENST00000547672 DOPEY2Q9Y3R5 2298 aa10.48□□□□□ -0.73
PTCH1-215ENST00000547672 ZNF98A6NK75 572 aa10.48□□□□□ -0.73
PTCH1-215ENST00000547672 TGOLN2O43493 480 aa10.48□□□□□ -0.73
PTCH1-215ENST00000547672 S100PP25815 95 aa10.48□□□□□ -0.73
PTCH1-215ENST00000547672 PPIFP30405 207 aaKnown RBP10.48□□□□□ -0.73
PTCH1-215ENST00000547672 TPPP2P59282 170 aa10.48□□□□□ -0.73
PTCH1-215ENST00000547672 BLCAPP62952 87 aa10.48□□□□□ -0.73
PTCH1-215ENST00000547672 PDE6HQ13956 83 aa10.48□□□□□ -0.73
PTCH1-215ENST00000547672 C1orf194Q5T5A4 169 aa10.48□□□□□ -0.73
PTCH1-215ENST00000547672 MS4A10Q96PG2 267 aa10.48□□□□□ -0.73
PTCH1-215ENST00000547672 OR5B12Q96R08 314 aa10.48□□□□□ -0.73
PTCH1-215ENST00000547672 BIN3Q9NQY0 253 aa10.48□□□□□ -0.73
PTCH1-215ENST00000547672 OTORQ9NRC9 128 aa10.48□□□□□ -0.73
PTCH1-215ENST00000547672 F8W735 103 aaPredicted RBP10.47□□□□□ -0.73
PTCH1-215ENST00000547672 K7EQM0 130 aa10.47□□□□□ -0.73
PTCH1-215ENST00000547672 IGLV1-40P01703 118 aa10.47□□□□□ -0.73
PTCH1-215ENST00000547672 PYYP10082 97 aa10.47□□□□□ -0.73
PTCH1-215ENST00000547672 PF4V1P10720 104 aa10.47□□□□□ -0.73
PTCH1-215ENST00000547672 GP9P14770 177 aa10.47□□□□□ -0.73
PTCH1-215ENST00000547672 GPR183P32249 361 aa10.47□□□□□ -0.73
PTCH1-215ENST00000547672 GNG4P50150 75 aa10.47□□□□□ -0.73
PTCH1-215ENST00000547672 RPL23P62829 140 aaKnown RBP10.47□□□□□ -0.73
PTCH1-215ENST00000547672 PSG9Q00887 426 aa10.47□□□□□ -0.73
PTCH1-215ENST00000547672 RNF212Q495C1 297 aa10.47□□□□□ -0.73
PTCH1-215ENST00000547672 MORN5Q5VZ52 161 aa10.47□□□□□ -0.73
PTCH1-215ENST00000547672 ZNF343Q6P1L6 599 aa10.47□□□□□ -0.73
PTCH1-215ENST00000547672 TMEM88Q6PEY1 159 aa10.47□□□□□ -0.73
PTCH1-215ENST00000547672 CLEC19AQ6UXS0 136 aa10.47□□□□□ -0.73
PTCH1-215ENST00000547672 C5orf17Q8NAS9 161 aa10.47□□□□□ -0.73
PTCH1-215ENST00000547672 CMTM2Q8TAZ6 248 aa10.47□□□□□ -0.73
PTCH1-215ENST00000547672 SMIM12Q96EX1 92 aa10.47□□□□□ -0.73
PTCH1-215ENST00000547672 GNB4Q9HAV0 340 aa10.47□□□□□ -0.73
PTCH1-215ENST00000547672 SOX21Q9Y651 276 aaPredicted RBP10.47□□□□□ -0.73
PTCH1-215ENST00000547672 SCO2A0A1W2PP80 73 aa10.46□□□□□ -0.73
PTCH1-215ENST00000547672 PGPA6NDG6 321 aa10.46□□□□□ -0.73
PTCH1-215ENST00000547672 SH2D7A6NKC9 451 aaPredicted RBP10.46□□□□□ -0.73
PTCH1-215ENST00000547672 SMAD7O15105 426 aaKnown RBP10.46□□□□□ -0.73
PTCH1-215ENST00000547672 IGHG4P01861 327 aa10.46□□□□□ -0.73
PTCH1-215ENST00000547672 NPPCP23582 126 aa10.46□□□□□ -0.73
PTCH1-215ENST00000547672 CRYBB3P26998 211 aa10.46□□□□□ -0.73
PTCH1-215ENST00000547672 AKR1C3P42330 323 aa10.46□□□□□ -0.73
PTCH1-215ENST00000547672 RANP62826 216 aaKnown RBP10.46□□□□□ -0.73
PTCH1-215ENST00000547672 RPL19P84098 196 aaKnown RBP10.46□□□□□ -0.73
PTCH1-215ENST00000547672 KIAA0141Q14154 515 aaPredicted RBP10.46□□□□□ -0.73
PTCH1-215ENST00000547672 HIST2H2BCQ6DN03 193 aa10.46□□□□□ -0.73
PTCH1-215ENST00000547672 CBLN2Q8IUK8 224 aa10.46□□□□□ -0.73
PTCH1-215ENST00000547672 METTL26Q96S19 204 aa10.46□□□□□ -0.73
PTCH1-215ENST00000547672 AAMDCQ9H7C9 122 aa10.46□□□□□ -0.73
PTCH1-215ENST00000547672 TMEM160Q9NX00 188 aa10.46□□□□□ -0.73
PTCH1-215ENST00000547672 CDC42EP3Q9UKI2 254 aa10.46□□□□□ -0.73
PTCH1-215ENST00000547672 EPDR1Q9UM22 224 aa10.46□□□□□ -0.73
PTCH1-215ENST00000547672 CELSR2Q9HCU4 2923 aa10.45□□□□□ -0.74
PTCH1-215ENST00000547672 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.45□□□□□ -0.74
PTCH1-215ENST00000547672 MDFIC2A0A1B0GVS7 189 aa10.45□□□□□ -0.74
PTCH1-215ENST00000547672 SERTM2A0A1B0GWG4 89 aa10.45□□□□□ -0.74
PTCH1-215ENST00000547672 FBLL1A6NHQ2 334 aaKnown RBP10.45□□□□□ -0.74
PTCH1-215ENST00000547672 H7BYZ3 331 aa10.45□□□□□ -0.74
PTCH1-215ENST00000547672 ZNF253O75346 499 aa10.45□□□□□ -0.74
PTCH1-215ENST00000547672 SLC25A5P05141 298 aaKnown RBP10.45□□□□□ -0.74
PTCH1-215ENST00000547672 ELANEP08246 267 aa10.45□□□□□ -0.74
PTCH1-215ENST00000547672 ARL3P36405 182 aa10.45□□□□□ -0.74
PTCH1-215ENST00000547672 RPL35P42766 123 aaKnown RBP10.45□□□□□ -0.74
PTCH1-215ENST00000547672 TEX38Q6PEX7 206 aa10.45□□□□□ -0.74
PTCH1-215ENST00000547672 KCNIP4Q6PIL6 250 aa10.45□□□□□ -0.74
PTCH1-215ENST00000547672 TOMM20LQ6UXN7 152 aa10.45□□□□□ -0.74
PTCH1-215ENST00000547672 LINC01551Q86U37 167 aa10.45□□□□□ -0.74
PTCH1-215ENST00000547672 ZNF329Q86UD4 541 aa10.45□□□□□ -0.74
PTCH1-215ENST00000547672 OR8I2Q8N0Y5 310 aa10.45□□□□□ -0.74
PTCH1-215ENST00000547672 BLNKQ8WV28 456 aa10.45□□□□□ -0.74
PTCH1-215ENST00000547672 IMMP2LQ96T52 175 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms