RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 PYY3Q5JQD4 70 aa10.09□□□□□ -0.79
SCAF11-209ENST00000547018 SRD5A3Q9H8P0 318 aa10.09□□□□□ -0.79
SCAF11-209ENST00000547018 LINC01548A6NM66 108 aa10.09□□□□□ -0.79
SCAF11-209ENST00000547018 SNURFLB1AK76 121 aa10.09□□□□□ -0.79
SCAF11-209ENST00000547018 CORTO00230 105 aa10.09□□□□□ -0.79
SCAF11-209ENST00000547018 TMEM256Q8N2U0 113 aa10.09□□□□□ -0.79
SCAF11-209ENST00000547018 OR1L6Q8NGR2 347 aa10.09□□□□□ -0.79
SCAF11-209ENST00000547018 OR1P1Q8NH06 330 aa10.09□□□□□ -0.79
SCAF11-209ENST00000547018 HECTD1Q9ULT8 2610 aa10.09□□□□□ -0.79
SCAF11-209ENST00000547018 EFNA4P52798 201 aa10.09□□□□□ -0.79
SCAF11-209ENST00000547018 IBA57Q5T440 356 aaKnown RBP10.09□□□□□ -0.79
SCAF11-209ENST00000547018 ETFRF1Q6IPR1 90 aa10.09□□□□□ -0.79
SCAF11-209ENST00000547018 OR4A5Q8NH83 315 aa10.09□□□□□ -0.79
SCAF11-209ENST00000547018 PACRGQ96M98 296 aaPredicted RBP10.09□□□□□ -0.79
SCAF11-209ENST00000547018 NAT8BQ9UHF3 227 aa10.09□□□□□ -0.79
SCAF11-209ENST00000547018 HIGD1AQ9Y241 93 aa10.09□□□□□ -0.79
SCAF11-209ENST00000547018 M0R3E3 92 aa10.08□□□□□ -0.8
SCAF11-209ENST00000547018 AMY1AP04745 511 aa10.08□□□□□ -0.8
SCAF11-209ENST00000547018 ZNF137PP52743 207 aa10.08□□□□□ -0.8
SCAF11-209ENST00000547018 C5orf64Q2M2E5 130 aa10.08□□□□□ -0.8
SCAF11-209ENST00000547018 MUC21A0A0G2JKD1 596 aa10.08□□□□□ -0.8
SCAF11-209ENST00000547018 MUC21A0A140T8X8 626 aa10.08□□□□□ -0.8
SCAF11-209ENST00000547018 IGHV4-39P01824 125 aa10.08□□□□□ -0.8
SCAF11-209ENST00000547018 HIST1H1BP16401 226 aaKnown RBP10.08□□□□□ -0.8
SCAF11-209ENST00000547018 MUC21Q5SSG8 566 aa10.08□□□□□ -0.8
SCAF11-209ENST00000547018 GOLT1AQ6ZVE7 132 aa10.08□□□□□ -0.8
SCAF11-209ENST00000547018 TMEM242Q9NWH2 141 aa10.08□□□□□ -0.8
SCAF11-209ENST00000547018 MXRA5Q9NR99 2828 aa10.08□□□□□ -0.8
SCAF11-209ENST00000547018 TRAV40A0A0B4J280 105 aa10.08□□□□□ -0.8
SCAF11-209ENST00000547018 A6NNC1 897 aa10.08□□□□□ -0.8
SCAF11-209ENST00000547018 PRNTQ86SH4 94 aa10.08□□□□□ -0.8
SCAF11-209ENST00000547018 CMTM2Q8TAZ6 248 aa10.08□□□□□ -0.8
SCAF11-209ENST00000547018 ARPC1AQ92747 370 aa10.08□□□□□ -0.8
SCAF11-209ENST00000547018 TNFRSF14Q92956 283 aa10.08□□□□□ -0.8
SCAF11-209ENST00000547018 IGKV3-7A0A075B6H7 116 aa10.07□□□□□ -0.8
SCAF11-209ENST00000547018 TMSB15BA0A087X1C1 80 aa10.07□□□□□ -0.8
SCAF11-209ENST00000547018 PHOX2AO14813 284 aa10.07□□□□□ -0.8
SCAF11-209ENST00000547018 GZMBP10144 247 aa10.07□□□□□ -0.8
SCAF11-209ENST00000547018 SELENOTP62341 195 aa10.07□□□□□ -0.8
SCAF11-209ENST00000547018 C16orf54Q6UWD8 224 aa10.07□□□□□ -0.8
SCAF11-209ENST00000547018 UNQ5815/PRO19632Q6UWF5 114 aa10.07□□□□□ -0.8
SCAF11-209ENST00000547018 HIST3H2BBQ8N257 126 aa10.07□□□□□ -0.8
SCAF11-209ENST00000547018 CCL19Q99731 98 aa10.07□□□□□ -0.8
SCAF11-209ENST00000547018 S100A8P05109 93 aa10.07□□□□□ -0.8
SCAF11-209ENST00000547018 HOXB4P17483 251 aaPredicted RBP10.07□□□□□ -0.8
SCAF11-209ENST00000547018 ADMP35318 185 aa10.07□□□□□ -0.8
SCAF11-209ENST00000547018 RPL15P61313 204 aaKnown RBP10.07□□□□□ -0.8
SCAF11-209ENST00000547018 RPEL1Q2QD12 228 aa10.07□□□□□ -0.8
SCAF11-209ENST00000547018 FBN2P35556 2912 aa10.07□□□□□ -0.8
SCAF11-209ENST00000547018 IGHV4-61A0A0C4DH41 118 aa10.06□□□□□ -0.8
SCAF11-209ENST00000547018 PEX7O00628 323 aa10.06□□□□□ -0.8
SCAF11-209ENST00000547018 IGKV1-17P01599 117 aa10.06□□□□□ -0.8
SCAF11-209ENST00000547018 LCNL1Q6ZST4 164 aa10.06□□□□□ -0.8
SCAF11-209ENST00000547018 BAGE3Q86Y29 109 aa10.06□□□□□ -0.8
SCAF11-209ENST00000547018 FXYD5Q96DB9 178 aa10.06□□□□□ -0.8
SCAF11-209ENST00000547018 SSBP4Q9BWG4 385 aaPredicted RBP10.06□□□□□ -0.8
SCAF11-209ENST00000547018 F2Z2F3 143 aa10.06□□□□□ -0.8
SCAF11-209ENST00000547018 NUPR1O60356 82 aa10.06□□□□□ -0.8
SCAF11-209ENST00000547018 GPR183P32249 361 aa10.06□□□□□ -0.8
SCAF11-209ENST00000547018 FAM71F2Q6NXP2 309 aa10.06□□□□□ -0.8
SCAF11-209ENST00000547018 HSPB9Q9BQS6 159 aa10.06□□□□□ -0.8
SCAF11-209ENST00000547018 LY6LH3BQJ8 138 aa10.06□□□□□ -0.8
SCAF11-209ENST00000547018 NDUFB8O95169 186 aa10.06□□□□□ -0.8
SCAF11-209ENST00000547018 IGLC1P0CG04 106 aa10.06□□□□□ -0.8
SCAF11-209ENST00000547018 LY6G5BQ8NDX9 201 aa10.06□□□□□ -0.8
SCAF11-209ENST00000547018 HIST1H2BLQ99880 126 aa10.06□□□□□ -0.8
SCAF11-209ENST00000547018 Q9H3A6 140 aa10.06□□□□□ -0.8
SCAF11-209ENST00000547018 TCF24Q7RTU0 167 aa10.05□□□□□ -0.8
SCAF11-209ENST00000547018 PIP4P2Q8N4L2 257 aa10.05□□□□□ -0.8
SCAF11-209ENST00000547018 C8orf31Q8N9H6 132 aa10.05□□□□□ -0.8
SCAF11-209ENST00000547018 CFHR4Q92496 578 aa10.05□□□□□ -0.8
SCAF11-209ENST00000547018 SLC25A39Q9BZJ4 359 aaPredicted RBP10.05□□□□□ -0.8
SCAF11-209ENST00000547018 MRPL18Q9H0U6 180 aaKnown RBP10.05□□□□□ -0.8
SCAF11-209ENST00000547018 K7EIM0 57 aa10.05□□□□□ -0.8
SCAF11-209ENST00000547018 CRYGBP07316 175 aa10.05□□□□□ -0.8
SCAF11-209ENST00000547018 ZNF329Q86UD4 541 aa10.05□□□□□ -0.8
SCAF11-209ENST00000547018 DTX2Q86UW9 622 aa10.05□□□□□ -0.8
SCAF11-209ENST00000547018 CIARTQ8N365 385 aaPredicted RBP10.05□□□□□ -0.8
SCAF11-209ENST00000547018 PSMB11A5LHX3 300 aa10.04□□□□□ -0.8
SCAF11-209ENST00000547018 SRP14P37108 136 aaKnown RBP10.04□□□□□ -0.8
SCAF11-209ENST00000547018 OR11H6Q8NGC7 330 aa10.04□□□□□ -0.8
SCAF11-209ENST00000547018 SVIPQ8NHG7 77 aa10.04□□□□□ -0.8
SCAF11-209ENST00000547018 TBX15Q96SF7 602 aa10.04□□□□□ -0.8
SCAF11-209ENST00000547018 FBXL7Q9UJT9 491 aa10.04□□□□□ -0.8
SCAF11-209ENST00000547018 FLNAP21333 2647 aaKnown RBP10.04□□□□□ -0.8
SCAF11-209ENST00000547018 A0A1W2PRE2 83 aa10.04□□□□□ -0.8
SCAF11-209ENST00000547018 SCGB1D1O95968 90 aa10.04□□□□□ -0.8
SCAF11-209ENST00000547018 MRPL32Q9BYC8 188 aaKnown RBP10.04□□□□□ -0.8
SCAF11-209ENST00000547018 PPP1R14DQ9NXH3 145 aa10.04□□□□□ -0.8
SCAF11-209ENST00000547018 ELOA3CA0A087WX78 387 aaPredicted RBP10.04□□□□□ -0.8
SCAF11-209ENST00000547018 I3L2K1 104 aa10.04□□□□□ -0.8
SCAF11-209ENST00000547018 GGCTO75223 188 aaKnown RBP10.04□□□□□ -0.8
SCAF11-209ENST00000547018 RPL19P84098 196 aaKnown RBP10.04□□□□□ -0.8
SCAF11-209ENST00000547018 TMEM116Q8NCL8 245 aa10.04□□□□□ -0.8
SCAF11-209ENST00000547018 OR2D3Q8NGH3 330 aa10.04□□□□□ -0.8
SCAF11-209ENST00000547018 IL36BQ9NZH7 164 aa10.04□□□□□ -0.8
SCAF11-209ENST00000547018 PITPNC1Q9UKF7 332 aa10.04□□□□□ -0.8
SCAF11-209ENST00000547018 CBY1Q9Y3M2 126 aa10.04□□□□□ -0.8
SCAF11-209ENST00000547018 ITPR2Q14571 2701 aa10.04□□□□□ -0.8
SCAF11-209ENST00000547018 FAM106CPP0CH98 169 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 175.9 ms