RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 METTL15P1P0C7V9 234 aa11.68□□□□□ -0.54
DDX54-204ENST00000546898 VAMP2P63027 116 aa11.68□□□□□ -0.54
DDX54-204ENST00000546898 ZFAND6Q6FIF0 208 aa11.68□□□□□ -0.54
DDX54-204ENST00000546898 C2orf50Q96LR7 162 aa11.68□□□□□ -0.54
DDX54-204ENST00000546898 MGAT4CQ9UBM8 478 aa11.68□□□□□ -0.54
DDX54-204ENST00000546898 STARD9Q9P2P6 4700 aa11.68□□□□□ -0.54
DDX54-204ENST00000546898 CCNKO75909 580 aa11.67□□□□□ -0.54
DDX54-204ENST00000546898 CA1P00915 261 aaPredicted RBP11.67□□□□□ -0.54
DDX54-204ENST00000546898 SELENOTP62341 195 aa11.67□□□□□ -0.54
DDX54-204ENST00000546898 TMEM41BQ5BJD5 291 aa11.67□□□□□ -0.54
DDX54-204ENST00000546898 PSMG4Q5JS54 123 aa11.67□□□□□ -0.54
DDX54-204ENST00000546898 GSG1LQ6UXU4 331 aa11.67□□□□□ -0.54
DDX54-204ENST00000546898 CYP2G1PQ6ZSU1 146 aa11.67□□□□□ -0.54
DDX54-204ENST00000546898 TRPT1Q86TN4 253 aaKnown RBP11.67□□□□□ -0.54
DDX54-204ENST00000546898 GGACTQ9BVM4 153 aa11.67□□□□□ -0.54
DDX54-204ENST00000546898 GPN1Q9HCN4 374 aaPredicted RBP11.67□□□□□ -0.54
DDX54-204ENST00000546898 NPVFQ9HCQ7 196 aa11.67□□□□□ -0.54
DDX54-204ENST00000546898 LSM5Q9Y4Y9 91 aaKnown RBP11.67□□□□□ -0.54
DDX54-204ENST00000546898 K7EPK0 472 aa11.66□□□□□ -0.54
DDX54-204ENST00000546898 PRAF2O60831 178 aa11.66□□□□□ -0.54
DDX54-204ENST00000546898 SPP1P10451 314 aa11.66□□□□□ -0.54
DDX54-204ENST00000546898 PVALBP20472 110 aaPredicted RBP11.66□□□□□ -0.54
DDX54-204ENST00000546898 RRAS2P62070 204 aaPredicted RBP11.66□□□□□ -0.54
DDX54-204ENST00000546898 IFITM3Q01628 133 aa11.66□□□□□ -0.54
DDX54-204ENST00000546898 SAMD13Q5VXD3 122 aa11.66□□□□□ -0.54
DDX54-204ENST00000546898 MORN3Q6PF18 240 aaPredicted RBP11.66□□□□□ -0.54
DDX54-204ENST00000546898 OR8I2Q8N0Y5 310 aa11.66□□□□□ -0.54
DDX54-204ENST00000546898 TMEM147Q9BVK8 224 aa11.66□□□□□ -0.54
DDX54-204ENST00000546898 ATF4P18848 351 aaPredicted RBP11.65□□□□□ -0.54
DDX54-204ENST00000546898 GATA2P23769 480 aaPredicted RBP11.65□□□□□ -0.54
DDX54-204ENST00000546898 MEOX2P50222 304 aa11.65□□□□□ -0.54
DDX54-204ENST00000546898 DEFA1P59665 94 aa11.65□□□□□ -0.54
DDX54-204ENST00000546898 DEFA3P59666 94 aa11.65□□□□□ -0.54
DDX54-204ENST00000546898 TEPPQ6URK8 271 aa11.65□□□□□ -0.54
DDX54-204ENST00000546898 GPR82Q96P67 336 aa11.65□□□□□ -0.54
DDX54-204ENST00000546898 TENM2Q9NT68 2774 aa11.64□□□□□ -0.55
DDX54-204ENST00000546898 A0A0J9YWU9 116 aa11.64□□□□□ -0.55
DDX54-204ENST00000546898 ZNF98A6NK75 572 aa11.64□□□□□ -0.55
DDX54-204ENST00000546898 KNCNA6PVL3 124 aa11.64□□□□□ -0.55
DDX54-204ENST00000546898 DEDDO75618 318 aa11.64□□□□□ -0.55
DDX54-204ENST00000546898 ORM2P19652 201 aa11.64□□□□□ -0.55
DDX54-204ENST00000546898 ID1P41134 155 aa11.64□□□□□ -0.55
DDX54-204ENST00000546898 GALR1P47211 349 aa11.64□□□□□ -0.55
DDX54-204ENST00000546898 PSMB3P49720 205 aa11.64□□□□□ -0.55
DDX54-204ENST00000546898 PLP1P60201 277 aa11.64□□□□□ -0.55
DDX54-204ENST00000546898 IL15RAQ13261 267 aa11.64□□□□□ -0.55
DDX54-204ENST00000546898 ACTL10Q5JWF8 245 aa11.64□□□□□ -0.55
DDX54-204ENST00000546898 TMEM182Q6ZP80 229 aaPredicted RBP11.64□□□□□ -0.55
DDX54-204ENST00000546898 NRARPQ7Z6K4 114 aa11.64□□□□□ -0.55
DDX54-204ENST00000546898 S100A7AQ86SG5 101 aa11.64□□□□□ -0.55
DDX54-204ENST00000546898 TMEM217Q8N7C4 229 aa11.64□□□□□ -0.55
DDX54-204ENST00000546898 OR1B1Q8NGR6 318 aa11.64□□□□□ -0.55
DDX54-204ENST00000546898 C11orf1Q9H5F2 150 aa11.64□□□□□ -0.55
DDX54-204ENST00000546898 DYNC2H1Q8NCM8 4307 aaKnown RBP11.64□□□□□ -0.55
DDX54-204ENST00000546898 INMT-MINDY4F8WBC2 141 aa11.63□□□□□ -0.55
DDX54-204ENST00000546898 SOCS3O14543 225 aa11.63□□□□□ -0.55
DDX54-204ENST00000546898 LINC00869P0C866 280 aa11.63□□□□□ -0.55
DDX54-204ENST00000546898 BCAP31P51572 246 aa11.63□□□□□ -0.55
DDX54-204ENST00000546898 CAV2P51636 162 aa11.63□□□□□ -0.55
DDX54-204ENST00000546898 S100A10P60903 97 aa11.63□□□□□ -0.55
DDX54-204ENST00000546898 RAP2BP61225 183 aa11.63□□□□□ -0.55
DDX54-204ENST00000546898 ARL16Q0P5N6 197 aa11.63□□□□□ -0.55
DDX54-204ENST00000546898 RARRES2Q99969 163 aa11.63□□□□□ -0.55
DDX54-204ENST00000546898 SLC25A32Q9H2D1 315 aa11.63□□□□□ -0.55
DDX54-204ENST00000546898 SLC25A22Q9H936 323 aa11.63□□□□□ -0.55
DDX54-204ENST00000546898 H3BRN7 92 aa11.62□□□□□ -0.55
DDX54-204ENST00000546898 ISLRO14498 428 aa11.62□□□□□ -0.55
DDX54-204ENST00000546898 SLC38A11Q08AI6 406 aa11.62□□□□□ -0.55
DDX54-204ENST00000546898 RAB32Q13637 225 aa11.62□□□□□ -0.55
DDX54-204ENST00000546898 PXDC1Q5TGL8 231 aa11.62□□□□□ -0.55
DDX54-204ENST00000546898 ZNF546Q86UE3 836 aa11.62□□□□□ -0.55
DDX54-204ENST00000546898 MARVELD1Q9BSK0 173 aa11.62□□□□□ -0.55
DDX54-204ENST00000546898 SLC25A39Q9BZJ4 359 aaPredicted RBP11.62□□□□□ -0.55
DDX54-204ENST00000546898 LYRM2Q9NU23 88 aaPredicted RBP11.62□□□□□ -0.55
DDX54-204ENST00000546898 RNF24Q9Y225 148 aa11.62□□□□□ -0.55
DDX54-204ENST00000546898 HIGD1AQ9Y241 93 aa11.62□□□□□ -0.55
DDX54-204ENST00000546898 LYSTQ99698 3801 aa11.62□□□□□ -0.55
DDX54-204ENST00000546898 HYPMO75409 117 aa11.61□□□□□ -0.55
DDX54-204ENST00000546898 HLA-DRB4P13762 266 aa11.61□□□□□ -0.55
DDX54-204ENST00000546898 C4BPBP20851 252 aa11.61□□□□□ -0.55
DDX54-204ENST00000546898 NUTF2P61970 127 aaKnown RBP11.61□□□□□ -0.55
DDX54-204ENST00000546898 OR11H2Q8NH07 326 aa11.61□□□□□ -0.55
DDX54-204ENST00000546898 SHANK2-AS3Q9BTD1 123 aa11.61□□□□□ -0.55
DDX54-204ENST00000546898 C11orf68Q9H3H3 251 aaKnown RBP11.61□□□□□ -0.55
DDX54-204ENST00000546898 DOK5Q9P104 306 aa11.61□□□□□ -0.55
DDX54-204ENST00000546898 HLA-DRB4X5D2U9 266 aa11.61□□□□□ -0.55
DDX54-204ENST00000546898 FAM24AA6NFZ4 105 aa11.6□□□□□ -0.55
DDX54-204ENST00000546898 H3BMM0 161 aa11.6□□□□□ -0.55
DDX54-204ENST00000546898 GOSR2O14653 212 aa11.6□□□□□ -0.55
DDX54-204ENST00000546898 AGPAT2O15120 278 aa11.6□□□□□ -0.55
DDX54-204ENST00000546898 GIG44P09565 113 aaPredicted RBP11.6□□□□□ -0.55
DDX54-204ENST00000546898 SULT1A1P50225 295 aa11.6□□□□□ -0.55
DDX54-204ENST00000546898 SPATA31B1PQ5VZV4 182 aa11.6□□□□□ -0.55
DDX54-204ENST00000546898 FOXI2Q6ZQN5 318 aa11.6□□□□□ -0.55
DDX54-204ENST00000546898 STX12Q86Y82 276 aa11.6□□□□□ -0.55
DDX54-204ENST00000546898 SCRT1Q9BWW7 348 aa11.6□□□□□ -0.55
DDX54-204ENST00000546898 C1QTNF4Q9BXJ3 329 aa11.6□□□□□ -0.55
DDX54-204ENST00000546898 SAV1Q9H4B6 383 aaPredicted RBP11.6□□□□□ -0.55
DDX54-204ENST00000546898 CST7O76096 145 aa11.59□□□□□ -0.55
DDX54-204ENST00000546898 OR5G3P0C626 314 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms