RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 CMC4P56277 68 aaPredicted RBP12.58□□□□□ -0.4
LTBR-215ENST00000546296 BAXQ07812 192 aa12.58□□□□□ -0.4
LTBR-215ENST00000546296 ZNF546Q86UE3 836 aa12.58□□□□□ -0.4
LTBR-215ENST00000546296 STXBP6Q8NFX7 210 aa12.58□□□□□ -0.4
LTBR-215ENST00000546296 DOK5Q9P104 306 aa12.58□□□□□ -0.4
LTBR-215ENST00000546296 MBD2Q9UBB5 411 aa12.58□□□□□ -0.4
LTBR-215ENST00000546296 UBQLN2Q9UHD9 624 aa12.58□□□□□ -0.4
LTBR-215ENST00000546296 UBE2L5PA0A1B0GUS4 154 aa12.57□□□□□ -0.4
LTBR-215ENST00000546296 RPL12P30050 165 aaKnown RBP12.57□□□□□ -0.4
LTBR-215ENST00000546296 CAMLGP49069 296 aa12.57□□□□□ -0.4
LTBR-215ENST00000546296 VWC2Q2TAL6 325 aa12.57□□□□□ -0.4
LTBR-215ENST00000546296 OR5C1Q8NGR4 320 aa12.57□□□□□ -0.4
LTBR-215ENST00000546296 GLMPQ8WWB7 406 aa12.57□□□□□ -0.4
LTBR-215ENST00000546296 MGST2Q99735 147 aa12.57□□□□□ -0.4
LTBR-215ENST00000546296 ASCL2Q99929 193 aa12.57□□□□□ -0.4
LTBR-215ENST00000546296 WFDC10AQ9H1F0 79 aa12.57□□□□□ -0.4
LTBR-215ENST00000546296 SLC45A2Q9UMX9 530 aa12.57□□□□□ -0.4
LTBR-215ENST00000546296 WDR83OSQ9Y284 106 aa12.57□□□□□ -0.4
LTBR-215ENST00000546296 PRKDCP78527 4128 aaKnown RBP12.57□□□□□ -0.4
LTBR-215ENST00000546296 A8MZ25 164 aa12.56□□□□□ -0.4
LTBR-215ENST00000546296 GIPP09681 153 aaPredicted RBP12.56□□□□□ -0.4
LTBR-215ENST00000546296 OR5G3P0C626 314 aa12.56□□□□□ -0.4
LTBR-215ENST00000546296 FGF7P21781 194 aa12.56□□□□□ -0.4
LTBR-215ENST00000546296 RAP2BP61225 183 aa12.56□□□□□ -0.4
LTBR-215ENST00000546296 FGL1Q08830 312 aa12.56□□□□□ -0.4
LTBR-215ENST00000546296 CLINT1Q14677 625 aa12.56□□□□□ -0.4
LTBR-215ENST00000546296 C1orf194Q5T5A4 169 aa12.56□□□□□ -0.4
LTBR-215ENST00000546296 SIGLEC15Q6ZMC9 328 aa12.56□□□□□ -0.4
LTBR-215ENST00000546296 S100A7AQ86SG5 101 aa12.56□□□□□ -0.4
LTBR-215ENST00000546296 OR8I2Q8N0Y5 310 aa12.56□□□□□ -0.4
LTBR-215ENST00000546296 ASB13Q8WXK3 278 aa12.56□□□□□ -0.4
LTBR-215ENST00000546296 ARL6Q9H0F7 186 aa12.56□□□□□ -0.4
LTBR-215ENST00000546296 SRD5A3Q9H8P0 318 aa12.56□□□□□ -0.4
LTBR-215ENST00000546296 C19orf73Q9NVV2 129 aa12.56□□□□□ -0.4
LTBR-215ENST00000546296 FBXL17Q9UF56 701 aa12.56□□□□□ -0.4
LTBR-215ENST00000546296 HIGD1AQ9Y241 93 aa12.56□□□□□ -0.4
LTBR-215ENST00000546296 TGP01266 2768 aa12.56□□□□□ -0.4
LTBR-215ENST00000546296 TRAV2A0A0B4J234 112 aa12.55□□□□□ -0.4
LTBR-215ENST00000546296 STPG3Q8N7X2 389 aa12.55□□□□□ -0.4
LTBR-215ENST00000546296 SLC25A22Q9H936 323 aa12.55□□□□□ -0.4
LTBR-215ENST00000546296 LYL1P12980 280 aa12.54□□□□□ -0.4
LTBR-215ENST00000546296 PLP1P60201 277 aa12.54□□□□□ -0.4
LTBR-215ENST00000546296 ODF3L2Q3SX64 289 aa12.54□□□□□ -0.4
LTBR-215ENST00000546296 PXDC1Q5TGL8 231 aa12.54□□□□□ -0.4
LTBR-215ENST00000546296 HSPB11Q9Y547 144 aa12.54□□□□□ -0.4
LTBR-215ENST00000546296 ZNF98A6NK75 572 aa12.53□□□□□ -0.4
LTBR-215ENST00000546296 COX7A2P2O60397 106 aa12.53□□□□□ -0.4
LTBR-215ENST00000546296 MPDU1O75352 247 aa12.53□□□□□ -0.4
LTBR-215ENST00000546296 NHLRC4P0CG21 123 aaPredicted RBP12.53□□□□□ -0.4
LTBR-215ENST00000546296 Q6ZRG5 221 aa12.53□□□□□ -0.4
LTBR-215ENST00000546296 GGTLC1Q9BX51 225 aa12.53□□□□□ -0.4
LTBR-215ENST00000546296 SLC25A39Q9BZJ4 359 aaPredicted RBP12.53□□□□□ -0.4
LTBR-215ENST00000546296 SMIM3Q9BZL3 60 aa12.53□□□□□ -0.4
LTBR-215ENST00000546296 K7EQG2 157 aa12.52□□□□□ -0.41
LTBR-215ENST00000546296 GALR1P47211 349 aa12.52□□□□□ -0.41
LTBR-215ENST00000546296 MIC13Q5XKP0 118 aa12.52□□□□□ -0.41
LTBR-215ENST00000546296 LEMD1Q68G75 181 aa12.52□□□□□ -0.41
LTBR-215ENST00000546296 APRG1Q8IVJ8 170 aa12.52□□□□□ -0.41
LTBR-215ENST00000546296 SBSPONQ8IVN8 264 aa12.52□□□□□ -0.41
LTBR-215ENST00000546296 ATP5SQ99766 215 aa12.52□□□□□ -0.41
LTBR-215ENST00000546296 FAM110AQ9BQ89 295 aa12.52□□□□□ -0.41
LTBR-215ENST00000546296 SHANK2-AS3Q9BTD1 123 aa12.52□□□□□ -0.41
LTBR-215ENST00000546296 ARV1Q9H2C2 271 aa12.52□□□□□ -0.41
LTBR-215ENST00000546296 NRN1Q9NPD7 142 aa12.52□□□□□ -0.41
LTBR-215ENST00000546296 ELOA3CA0A087WX78 387 aaPredicted RBP12.51□□□□□ -0.41
LTBR-215ENST00000546296 RBMY1BA6NDE4 496 aaKnown RBP12.51□□□□□ -0.41
LTBR-215ENST00000546296 RBMY1EA6NEQ0 496 aaKnown RBP12.51□□□□□ -0.41
LTBR-215ENST00000546296 IFNA5P01569 189 aa12.51□□□□□ -0.41
LTBR-215ENST00000546296 RBMY1DP0C7P1 496 aaKnown RBP12.51□□□□□ -0.41
LTBR-215ENST00000546296 RPL29P47914 159 aaKnown RBP12.51□□□□□ -0.41
LTBR-215ENST00000546296 DEFB131AP59861 70 aa12.51□□□□□ -0.41
LTBR-215ENST00000546296 Q5BKY6 102 aa12.51□□□□□ -0.41
LTBR-215ENST00000546296 PATE2Q6UY27 113 aa12.51□□□□□ -0.41
LTBR-215ENST00000546296 FAM24BQ8N5W8 94 aa12.51□□□□□ -0.41
LTBR-215ENST00000546296 ZNF709Q8N972 641 aa12.51□□□□□ -0.41
LTBR-215ENST00000546296 OR2T35Q8NGX2 323 aa12.51□□□□□ -0.41
LTBR-215ENST00000546296 SCGB1C1Q8TD33 95 aa12.51□□□□□ -0.41
LTBR-215ENST00000546296 UHRF2Q96PU4 802 aa12.51□□□□□ -0.41
LTBR-215ENST00000546296 SCRT1Q9BWW7 348 aa12.51□□□□□ -0.41
LTBR-215ENST00000546296 SLC25A32Q9H2D1 315 aa12.51□□□□□ -0.41
LTBR-215ENST00000546296 MAP6D1Q9H9H5 199 aa12.51□□□□□ -0.41
LTBR-215ENST00000546296 DNAJC4Q9NNZ3 241 aa12.51□□□□□ -0.41
LTBR-215ENST00000546296 RNF24Q9Y225 148 aa12.51□□□□□ -0.41
LTBR-215ENST00000546296 LOC102724200A0A096LPH7 203 aaPredicted RBP12.5□□□□□ -0.41
LTBR-215ENST00000546296 H3BRN7 92 aa12.5□□□□□ -0.41
LTBR-215ENST00000546296 ZNF688P0C7X2 276 aa12.5□□□□□ -0.41
LTBR-215ENST00000546296 B2MP61769 119 aa12.5□□□□□ -0.41
LTBR-215ENST00000546296 OPCMLQ14982 345 aa12.5□□□□□ -0.41
LTBR-215ENST00000546296 C10orf113Q5VZT2 155 aa12.5□□□□□ -0.41
LTBR-215ENST00000546296 OR1L4Q8NGR5 311 aa12.5□□□□□ -0.41
LTBR-215ENST00000546296 DCANP1Q8TF63 244 aa12.5□□□□□ -0.41
LTBR-215ENST00000546296 CHAC2Q8WUX2 184 aa12.5□□□□□ -0.41
LTBR-215ENST00000546296 GPR82Q96P67 336 aa12.5□□□□□ -0.41
LTBR-215ENST00000546296 RSG1Q9BU20 258 aa12.5□□□□□ -0.41
LTBR-215ENST00000546296 NPCDR1Q9BY65 106 aa12.5□□□□□ -0.41
LTBR-215ENST00000546296 SLC39A9Q9NUM3 307 aa12.5□□□□□ -0.41
LTBR-215ENST00000546296 PXMP4Q9Y6I8 212 aa12.5□□□□□ -0.41
LTBR-215ENST00000546296 FXYD6-FXYD2A0A087WZ82 144 aa12.49□□□□□ -0.41
LTBR-215ENST00000546296 SNRPD3P62318 126 aaKnown RBP12.49□□□□□ -0.41
LTBR-215ENST00000546296 PRR20EP86478 221 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms