RNA–Protein interactions for RNA: ENST00000545901.5

HMBS-223, Transcript of hydroxymethylbilane synthase, human

TSL 1 (best)

Gene HMBS, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMBS-223	ENST00000545901	ARPC5L	Q9BPX5	153 aa		13.2	□□□□□ -0.3
HMBS-223	ENST00000545901	TIMM9	Q9Y5J7	89 aa		13.2	□□□□□ -0.3
HMBS-223	ENST00000545901	PXMP4	Q9Y6I8	212 aa		13.2	□□□□□ -0.3
HMBS-223	ENST00000545901	ELOA3C	A0A087WX78	387 aa	Predicted RBP	13.19	□□□□□ -0.3
HMBS-223	ENST00000545901	BORCS7-ASMT	A0A0B4J1R7	106 aa		13.19	□□□□□ -0.3
HMBS-223	ENST00000545901	HYPM	O75409	117 aa		13.19	□□□□□ -0.3
HMBS-223	ENST00000545901	B2M	P61769	119 aa		13.19	□□□□□ -0.3
HMBS-223	ENST00000545901	SAMD5	Q5TGI4	173 aa		13.19	□□□□□ -0.3
HMBS-223	ENST00000545901	MIC13	Q5XKP0	118 aa		13.19	□□□□□ -0.3
HMBS-223	ENST00000545901	PBDC1	Q9BVG4	233 aa		13.19	□□□□□ -0.3
HMBS-223	ENST00000545901	RHPN1-AS1	Q9BWJ2	59 aa		13.19	□□□□□ -0.3
HMBS-223	ENST00000545901	SLC39A9	Q9NUM3	307 aa		13.19	□□□□□ -0.3
HMBS-223	ENST00000545901	CHEK1	O14757	476 aa		13.18	□□□□□ -0.3
HMBS-223	ENST00000545901	ZNF207	O43670	478 aa	Known RBP	13.18	□□□□□ -0.3
HMBS-223	ENST00000545901	DEFB114	Q30KQ6	69 aa		13.18	□□□□□ -0.3
HMBS-223	ENST00000545901	OR1L4	Q8NGR5	311 aa		13.18	□□□□□ -0.3
HMBS-223	ENST00000545901	PFDN5	Q99471	154 aa		13.18	□□□□□ -0.3
HMBS-223	ENST00000545901	PSMG3	Q9BT73	122 aa	Predicted RBP	13.18	□□□□□ -0.3
HMBS-223	ENST00000545901	ARL6	Q9H0F7	186 aa		13.18	□□□□□ -0.3
HMBS-223	ENST00000545901	CYTL1	Q9NRR1	136 aa		13.18	□□□□□ -0.3
HMBS-223	ENST00000545901	ZMAT5	Q9UDW3	170 aa	Known RBP	13.18	□□□□□ -0.3
HMBS-223	ENST00000545901	RNF24	Q9Y225	148 aa		13.18	□□□□□ -0.3
HMBS-223	ENST00000545901	TRAV25	A0A0B4J276	109 aa		13.17	□□□□□ -0.3
HMBS-223	ENST00000545901	KANTR	A0A1W2PQU2	76 aa		13.17	□□□□□ -0.3
HMBS-223	ENST00000545901	BCL2L11	O43521	198 aa		13.17	□□□□□ -0.3
HMBS-223	ENST00000545901	BUB3	O43684	328 aa		13.17	□□□□□ -0.3
HMBS-223	ENST00000545901	ORM2	P19652	201 aa		13.17	□□□□□ -0.3
HMBS-223	ENST00000545901	EDN2	P20800	178 aa		13.17	□□□□□ -0.3
HMBS-223	ENST00000545901	LGALSL	Q3ZCW2	172 aa	Predicted RBP	13.17	□□□□□ -0.3
HMBS-223	ENST00000545901	C1orf194	Q5T5A4	169 aa		13.17	□□□□□ -0.3
HMBS-223	ENST00000545901	RPL7L1	Q6DKI1	246 aa	Known RBP	13.17	□□□□□ -0.3
HMBS-223	ENST00000545901	TMUB2	Q71RG4	321 aa		13.17	□□□□□ -0.3
HMBS-223	ENST00000545901	OR1B1	Q8NGR6	318 aa		13.17	□□□□□ -0.3
HMBS-223	ENST00000545901	DYNLRB2	Q8TF09	96 aa		13.17	□□□□□ -0.3
HMBS-223	ENST00000545901	GNPNAT1	Q96EK6	184 aa	Predicted RBP	13.17	□□□□□ -0.3
HMBS-223	ENST00000545901	GRAMD2B	Q96HH9	432 aa		13.17	□□□□□ -0.3
HMBS-223	ENST00000545901	MLX	Q9UH92	298 aa		13.17	□□□□□ -0.3
HMBS-223	ENST00000545901	HIGD1A	Q9Y241	93 aa		13.17	□□□□□ -0.3
HMBS-223	ENST00000545901	PFDN1	O60925	122 aa		13.16	□□□□□ -0.3
HMBS-223	ENST00000545901	APOH	P02749	345 aa	Predicted RBP	13.16	□□□□□ -0.3
HMBS-223	ENST00000545901	EGFEM1P	Q0D2K5	195 aa		13.16	□□□□□ -0.3
HMBS-223	ENST00000545901	OXLD1	Q5BKU9	147 aa		13.16	□□□□□ -0.3
HMBS-223	ENST00000545901	C16orf54	Q6UWD8	224 aa		13.16	□□□□□ -0.3
HMBS-223	ENST00000545901	OR2G3	Q8NGZ4	309 aa		13.16	□□□□□ -0.3
HMBS-223	ENST00000545901	GATAD1	Q8WUU5	269 aa		13.16	□□□□□ -0.3
HMBS-223	ENST00000545901	ST8SIA2	Q92186	375 aa		13.16	□□□□□ -0.3
HMBS-223	ENST00000545901	RSG1	Q9BU20	258 aa		13.16	□□□□□ -0.3
HMBS-223	ENST00000545901	ARV1	Q9H2C2	271 aa		13.16	□□□□□ -0.3
HMBS-223	ENST00000545901	DNAJC4	Q9NNZ3	241 aa		13.16	□□□□□ -0.3
HMBS-223	ENST00000545901		H3BRN7	92 aa		13.15	□□□□□ -0.3
HMBS-223	ENST00000545901	COX7A2P2	O60397	106 aa		13.15	□□□□□ -0.3
HMBS-223	ENST00000545901	ATP6V0C	P27449	155 aa		13.15	□□□□□ -0.3
HMBS-223	ENST00000545901	SERF2	P84101	59 aa		13.15	□□□□□ -0.3
HMBS-223	ENST00000545901	LAMTOR1	Q6IAA8	161 aa		13.15	□□□□□ -0.3
HMBS-223	ENST00000545901	LCN12	Q6JVE5	192 aa		13.15	□□□□□ -0.3
HMBS-223	ENST00000545901	PATE2	Q6UY27	113 aa		13.15	□□□□□ -0.3
HMBS-223	ENST00000545901	GLMP	Q8WWB7	406 aa		13.15	□□□□□ -0.3
HMBS-223	ENST00000545901	TMEM37	Q8WXS4	190 aa		13.15	□□□□□ -0.3
HMBS-223	ENST00000545901	SHANK2-AS3	Q9BTD1	123 aa		13.15	□□□□□ -0.3
HMBS-223	ENST00000545901	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	13.15	□□□□□ -0.3
HMBS-223	ENST00000545901	ZNF98	A6NK75	572 aa		13.14	□□□□□ -0.31
HMBS-223	ENST00000545901	OR5G3	P0C626	314 aa		13.14	□□□□□ -0.31
HMBS-223	ENST00000545901	EIF5A	P63241	154 aa	Known RBP	13.14	□□□□□ -0.31
HMBS-223	ENST00000545901	CD300E	Q496F6	205 aa	Predicted RBP	13.14	□□□□□ -0.31
HMBS-223	ENST00000545901	KPRP	Q5T749	579 aa	Predicted RBP	13.14	□□□□□ -0.31
HMBS-223	ENST00000545901	C10orf113	Q5VZT2	155 aa		13.14	□□□□□ -0.31
HMBS-223	ENST00000545901	FAM90A2P	Q658T7	463 aa		13.14	□□□□□ -0.31
HMBS-223	ENST00000545901	C9orf62	Q8N4C0	152 aa		13.14	□□□□□ -0.31
HMBS-223	ENST00000545901	HSD17B11	Q8NBQ5	300 aa		13.14	□□□□□ -0.31
HMBS-223	ENST00000545901	GPR82	Q96P67	336 aa		13.14	□□□□□ -0.31
HMBS-223	ENST00000545901	RNF2	Q99496	336 aa		13.14	□□□□□ -0.31
HMBS-223	ENST00000545901	DOK5	Q9P104	306 aa		13.14	□□□□□ -0.31
HMBS-223	ENST00000545901	CMYA5	Q8N3K9	4069 aa		13.13	□□□□□ -0.31
HMBS-223	ENST00000545901	IGHV3-49	A0A0A0MS15	119 aa		13.13	□□□□□ -0.31
HMBS-223	ENST00000545901	HELT	A6NFD8	242 aa		13.13	□□□□□ -0.31
HMBS-223	ENST00000545901	TSPAN4	O14817	238 aa		13.13	□□□□□ -0.31
HMBS-223	ENST00000545901	C4BPB	P20851	252 aa		13.13	□□□□□ -0.31
HMBS-223	ENST00000545901	PPP1R14B	Q96C90	147 aa		13.13	□□□□□ -0.31
HMBS-223	ENST00000545901	IGHV3OR16-13	A0A075B7E8	117 aa		13.12	□□□□□ -0.31
HMBS-223	ENST00000545901	IGHV3-74	A0A0B4J1X5	117 aa		13.12	□□□□□ -0.31
HMBS-223	ENST00000545901		G3V4G9	280 aa		13.12	□□□□□ -0.31
HMBS-223	ENST00000545901	FFAR4	Q5NUL3	377 aa		13.12	□□□□□ -0.31
HMBS-223	ENST00000545901	RBPMS2	Q6ZRY4	209 aa	Known RBP	13.12	□□□□□ -0.31
HMBS-223	ENST00000545901	TCF24	Q7RTU0	167 aa		13.12	□□□□□ -0.31
HMBS-223	ENST00000545901	LINC00305	Q7Z4B0	112 aa		13.12	□□□□□ -0.31
HMBS-223	ENST00000545901	TMEM61	Q8N0U2	210 aa		13.12	□□□□□ -0.31
HMBS-223	ENST00000545901	STOML3	Q8TAV4	291 aa		13.12	□□□□□ -0.31
HMBS-223	ENST00000545901	ZNF471	Q9BX82	626 aa	Predicted RBP	13.12	□□□□□ -0.31
HMBS-223	ENST00000545901	NOTCH3	Q9UM47	2321 aa		13.12	□□□□□ -0.31
HMBS-223	ENST00000545901	TRAV2	A0A0B4J234	112 aa		13.11	□□□□□ -0.31
HMBS-223	ENST00000545901	IGHV3-66	A0A0C4DH42	116 aa		13.11	□□□□□ -0.31
HMBS-223	ENST00000545901	MB	P02144	154 aa		13.11	□□□□□ -0.31
HMBS-223	ENST00000545901	M6PR	P20645	277 aa		13.11	□□□□□ -0.31
HMBS-223	ENST00000545901	BEAN1	Q3B7T3	259 aa		13.11	□□□□□ -0.31
HMBS-223	ENST00000545901	ACOT6	Q3I5F7	207 aa	Predicted RBP	13.11	□□□□□ -0.31
HMBS-223	ENST00000545901	UHRF2	Q96PU4	802 aa		13.11	□□□□□ -0.31
HMBS-223	ENST00000545901	SPAG8	Q99932	426 aa	Predicted RBP	13.11	□□□□□ -0.31
HMBS-223	ENST00000545901	MRPL32	Q9BYC8	188 aa	Known RBP	13.11	□□□□□ -0.31
HMBS-223	ENST00000545901	SPP1	P10451	314 aa		13.1	□□□□□ -0.31
HMBS-223	ENST00000545901	TPT1	P13693	172 aa	Known RBP	13.1	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 38 ms