RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 GPR141Q7Z602 305 aa10.15□□□□□ -0.78
RTN3-214ENST00000545432 LHFPL5Q8TAF8 219 aa10.15□□□□□ -0.78
RTN3-214ENST00000545432 RXFP4Q8TDU9 374 aa10.15□□□□□ -0.78
RTN3-214ENST00000545432 FRZBQ92765 325 aa10.15□□□□□ -0.78
RTN3-214ENST00000545432 CACFD1Q9UGQ2 172 aa10.15□□□□□ -0.78
RTN3-214ENST00000545432 MRPS16Q9Y3D3 137 aaKnown RBP10.15□□□□□ -0.78
RTN3-214ENST00000545432 SRRM2Q9UQ35 2752 aaKnown RBP10.15□□□□□ -0.78
RTN3-214ENST00000545432 DUSP14O95147 198 aaKnown RBP10.14□□□□□ -0.79
RTN3-214ENST00000545432 INSP01308 110 aa10.14□□□□□ -0.79
RTN3-214ENST00000545432 GPX4P36969 197 aaPredicted RBP10.14□□□□□ -0.79
RTN3-214ENST00000545432 ZNF90Q03938 601 aa10.14□□□□□ -0.79
RTN3-214ENST00000545432 SELENOHQ8IZQ5 122 aaKnown RBP10.14□□□□□ -0.79
RTN3-214ENST00000545432 ZFAND1Q8TCF1 268 aa10.14□□□□□ -0.79
RTN3-214ENST00000545432 PBDC1Q9BVG4 233 aa10.14□□□□□ -0.79
RTN3-214ENST00000545432 COPZ2Q9P299 210 aa10.14□□□□□ -0.79
RTN3-214ENST00000545432 U3KQ87 197 aa10.14□□□□□ -0.79
RTN3-214ENST00000545432 M0R2Z0 102 aa10.13□□□□□ -0.79
RTN3-214ENST00000545432 APOA1P02647 267 aa10.13□□□□□ -0.79
RTN3-214ENST00000545432 TGFBR1P36897 503 aa10.13□□□□□ -0.79
RTN3-214ENST00000545432 CNN1P51911 297 aaKnown RBP10.13□□□□□ -0.79
RTN3-214ENST00000545432 ATP5IP56385 69 aaPredicted RBP10.13□□□□□ -0.79
RTN3-214ENST00000545432 TAS2R60P59551 318 aa10.13□□□□□ -0.79
RTN3-214ENST00000545432 GAMTQ14353 236 aa10.13□□□□□ -0.79
RTN3-214ENST00000545432 SPINK13Q1W4C9 94 aa10.13□□□□□ -0.79
RTN3-214ENST00000545432 OR8I2Q8N0Y5 310 aa10.13□□□□□ -0.79
RTN3-214ENST00000545432 CCDC71LQ8N9Z2 235 aa10.13□□□□□ -0.79
RTN3-214ENST00000545432 TERB2Q8NHR7 220 aa10.13□□□□□ -0.79
RTN3-214ENST00000545432 RBPMSQ93062 196 aaKnown RBP10.13□□□□□ -0.79
RTN3-214ENST00000545432 C16orf92Q96LL3 132 aa10.13□□□□□ -0.79
RTN3-214ENST00000545432 C18orf15Q96N68 181 aa10.13□□□□□ -0.79
RTN3-214ENST00000545432 ZNF586Q9NXT0 402 aa10.13□□□□□ -0.79
RTN3-214ENST00000545432 CACNG5Q9UF02 275 aa10.13□□□□□ -0.79
RTN3-214ENST00000545432 SLC45A2Q9UMX9 530 aa10.13□□□□□ -0.79
RTN3-214ENST00000545432 TIMM8BQ9Y5J9 83 aaPredicted RBP10.13□□□□□ -0.79
RTN3-214ENST00000545432 HMCN2Q8NDA2 5059 aa10.12□□□□□ -0.79
RTN3-214ENST00000545432 TEX13DA0A0J9YY54 714 aaPredicted RBP10.12□□□□□ -0.79
RTN3-214ENST00000545432 CEBPZOSA8MTT3 80 aa10.12□□□□□ -0.79
RTN3-214ENST00000545432 SNRPGP15A8MWD9 76 aa10.12□□□□□ -0.79
RTN3-214ENST00000545432 TBPP20226 339 aa10.12□□□□□ -0.79
RTN3-214ENST00000545432 M6PRP20645 277 aa10.12□□□□□ -0.79
RTN3-214ENST00000545432 LINC00315P59091 139 aa10.12□□□□□ -0.79
RTN3-214ENST00000545432 ZNF493Q6ZR52 646 aa10.12□□□□□ -0.79
RTN3-214ENST00000545432 TMEM256Q8N2U0 113 aa10.12□□□□□ -0.79
RTN3-214ENST00000545432 OR4D5Q8NGN0 318 aa10.12□□□□□ -0.79
RTN3-214ENST00000545432 GNPNAT1Q96EK6 184 aaPredicted RBP10.12□□□□□ -0.79
RTN3-214ENST00000545432 TRAV8-2A0A0B4J237 113 aa10.11□□□□□ -0.79
RTN3-214ENST00000545432 CD3DP04234 171 aa10.11□□□□□ -0.79
RTN3-214ENST00000545432 OR5AC1P0C628 307 aa10.11□□□□□ -0.79
RTN3-214ENST00000545432 KRTAP10-1P60331 282 aa10.11□□□□□ -0.79
RTN3-214ENST00000545432 RNASE10Q5GAN6 216 aaKnown RBP10.11□□□□□ -0.79
RTN3-214ENST00000545432 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.11□□□□□ -0.79
RTN3-214ENST00000545432 SNX29P2Q8IUI4 249 aa10.11□□□□□ -0.79
RTN3-214ENST00000545432 OR13C8Q8NGS7 320 aa10.11□□□□□ -0.79
RTN3-214ENST00000545432 RNASE8Q8TDE3 154 aaKnown RBP10.11□□□□□ -0.79
RTN3-214ENST00000545432 UHRF2Q96PU4 802 aa10.11□□□□□ -0.79
RTN3-214ENST00000545432 TRGV9Q99603 122 aa10.11□□□□□ -0.79
RTN3-214ENST00000545432 PTTG2Q9NZH5 202 aa10.11□□□□□ -0.79
RTN3-214ENST00000545432 TMEM56-RWDD3S4R434 201 aa10.11□□□□□ -0.79
RTN3-214ENST00000545432 IGKV1OR2-108A0A075B7D4 117 aa10.1□□□□□ -0.79
RTN3-214ENST00000545432 TRAV26-1A0A087WT03 109 aa10.1□□□□□ -0.79
RTN3-214ENST00000545432 SMIM31A0A1B0GVY4 71 aa10.1□□□□□ -0.79
RTN3-214ENST00000545432 ZFP92A6NM28 416 aa10.1□□□□□ -0.79
RTN3-214ENST00000545432 ZNF701M0R085 212 aaPredicted RBP10.1□□□□□ -0.79
RTN3-214ENST00000545432 GALR1P47211 349 aa10.1□□□□□ -0.79
RTN3-214ENST00000545432 LYZP61626 148 aa10.1□□□□□ -0.79
RTN3-214ENST00000545432 DLK1P80370 383 aa10.1□□□□□ -0.79
RTN3-214ENST00000545432 BAP18Q8IXM2 172 aa10.1□□□□□ -0.79
RTN3-214ENST00000545432 OR10J6PQ8NGY7 276 aa10.1□□□□□ -0.79
RTN3-214ENST00000545432 RNASE11Q8TAA1 199 aaKnown RBP10.1□□□□□ -0.79
RTN3-214ENST00000545432 C16orf74Q96GX8 76 aa10.1□□□□□ -0.79
RTN3-214ENST00000545432 RTBDNQ9BSG5 229 aaPredicted RBP10.1□□□□□ -0.79
RTN3-214ENST00000545432 RSG1Q9BU20 258 aa10.1□□□□□ -0.79
RTN3-214ENST00000545432 SLC25A32Q9H2D1 315 aa10.1□□□□□ -0.79
RTN3-214ENST00000545432 HSPB7Q9UBY9 170 aa10.1□□□□□ -0.79
RTN3-214ENST00000545432 CFDP00746 253 aaPredicted RBP10.09□□□□□ -0.79
RTN3-214ENST00000545432 FABP1P07148 127 aa10.09□□□□□ -0.79
RTN3-214ENST00000545432 HOXA5P20719 270 aa10.09□□□□□ -0.79
RTN3-214ENST00000545432 MEF2DQ14814 521 aa10.09□□□□□ -0.79
RTN3-214ENST00000545432 THAP8Q8NA92 274 aa10.09□□□□□ -0.79
RTN3-214ENST00000545432 MTFP1Q9UDX5 166 aa10.09□□□□□ -0.79
RTN3-214ENST00000545432 ZNF98A6NK75 572 aa10.08□□□□□ -0.8
RTN3-214ENST00000545432 BOLA2-SMG1P6H3BVE0 249 aa10.08□□□□□ -0.8
RTN3-214ENST00000545432 TMEM144Q7Z5S9 345 aa10.08□□□□□ -0.8
RTN3-214ENST00000545432 LGI3Q8N145 548 aa10.08□□□□□ -0.8
RTN3-214ENST00000545432 OR4D10Q8NGI6 311 aa10.08□□□□□ -0.8
RTN3-214ENST00000545432 OR1B1Q8NGR6 318 aa10.08□□□□□ -0.8
RTN3-214ENST00000545432 MARCH1Q8TCQ1 289 aa10.08□□□□□ -0.8
RTN3-214ENST00000545432 TMEM263Q8WUH6 116 aaKnown RBP10.08□□□□□ -0.8
RTN3-214ENST00000545432 IL22RA2Q969J5 263 aa10.08□□□□□ -0.8
RTN3-214ENST00000545432 GPR82Q96P67 336 aa10.08□□□□□ -0.8
RTN3-214ENST00000545432 LINC01587Q99440 93 aa10.08□□□□□ -0.8
RTN3-214ENST00000545432 NAA60Q9H7X0 242 aa10.08□□□□□ -0.8
RTN3-214ENST00000545432 NOP10Q9NPE3 64 aaKnown RBP10.08□□□□□ -0.8
RTN3-214ENST00000545432 MDFICQ9P1T7 246 aa10.08□□□□□ -0.8
RTN3-214ENST00000545432 TRAV12-2A0A075B6T6 113 aa10.07□□□□□ -0.8
RTN3-214ENST00000545432 FUSP35637 526 aaKnown RBP eCLIP10.07□□□□□ -0.8
RTN3-214ENST00000545432 OR5I1Q13606 314 aa10.07□□□□□ -0.8
RTN3-214ENST00000545432 SURF2Q15527 256 aaPredicted RBP10.07□□□□□ -0.8
RTN3-214ENST00000545432 GGNBP1Q5YKI7 109 aa10.07□□□□□ -0.8
RTN3-214ENST00000545432 DTD1Q8TEA8 209 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms