RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 DNM1P34Q6PK57 102 aa0.57□□□□□ -2.32
YBX3-214ENST00000544501 RASSF6Q6ZTQ3 369 aa0.57□□□□□ -2.32
YBX3-214ENST00000544501 KTN1-AS1Q86SY8 53 aa0.57□□□□□ -2.32
YBX3-214ENST00000544501 NAA40Q86UY6 237 aa0.57□□□□□ -2.32
YBX3-214ENST00000544501 OR1L8Q8NGR8 309 aa0.57□□□□□ -2.32
YBX3-214ENST00000544501 OR13C8Q8NGS7 320 aa0.57□□□□□ -2.32
YBX3-214ENST00000544501 RNASE6Q93091 150 aaKnown RBP0.57□□□□□ -2.32
YBX3-214ENST00000544501 ZNF514Q96K75 400 aaPredicted RBP0.57□□□□□ -2.32
YBX3-214ENST00000544501 Q96M85 177 aa0.57□□□□□ -2.32
YBX3-214ENST00000544501 DERL2Q9GZP9 239 aa0.57□□□□□ -2.32
YBX3-214ENST00000544501 CXorf21Q9HAI6 301 aa0.57□□□□□ -2.32
YBX3-214ENST00000544501 SPACA1Q9HBV2 294 aa0.57□□□□□ -2.32
YBX3-214ENST00000544501 CD300AQ9UGN4 299 aa0.57□□□□□ -2.32
YBX3-214ENST00000544501 LPAP08519 4548 aa0.57□□□□□ -2.32
YBX3-214ENST00000544501 TMED7-TICAM2A0A0A6YYA0 188 aa0.56□□□□□ -2.32
YBX3-214ENST00000544501 A0A0J9YW62 118 aa0.56□□□□□ -2.32
YBX3-214ENST00000544501 TINCRA0A1B0GVN0 87 aa0.56□□□□□ -2.32
YBX3-214ENST00000544501 TMEM269A0A1B0GVZ9 245 aa0.56□□□□□ -2.32
YBX3-214ENST00000544501 K7EIL1 84 aa0.56□□□□□ -2.32
YBX3-214ENST00000544501 COCHO43405 550 aa0.56□□□□□ -2.32
YBX3-214ENST00000544501 CIAO1O76071 339 aa0.56□□□□□ -2.32
YBX3-214ENST00000544501 KRT75O95678 551 aa0.56□□□□□ -2.32
YBX3-214ENST00000544501 PPBPP02775 128 aa0.56□□□□□ -2.32
YBX3-214ENST00000544501 IL6P05231 212 aa0.56□□□□□ -2.32
YBX3-214ENST00000544501 REG1AP05451 166 aa0.56□□□□□ -2.32
YBX3-214ENST00000544501 HIST1H1CP16403 213 aaKnown RBP0.56□□□□□ -2.32
YBX3-214ENST00000544501 DDTP30046 118 aa0.56□□□□□ -2.32
YBX3-214ENST00000544501 EVX1P49640 407 aa0.56□□□□□ -2.32
YBX3-214ENST00000544501 TPI1P60174 286 aa0.56□□□□□ -2.32
YBX3-214ENST00000544501 HLA-DRB3P79483 266 aa0.56□□□□□ -2.32
YBX3-214ENST00000544501 PPP1R1AQ13522 171 aa0.56□□□□□ -2.32
YBX3-214ENST00000544501 JOSD1Q15040 202 aaPredicted RBP0.56□□□□□ -2.32
YBX3-214ENST00000544501 TMEM155Q4W5P6 130 aa0.56□□□□□ -2.32
YBX3-214ENST00000544501 ZNF705AQ6ZN79 300 aaPredicted RBP0.56□□□□□ -2.32
YBX3-214ENST00000544501 Q6ZS92 163 aa0.56□□□□□ -2.32
YBX3-214ENST00000544501 FAM19A5Q7Z5A7 132 aaPredicted RBP0.56□□□□□ -2.32
YBX3-214ENST00000544501 CD302Q8IX05 232 aa0.56□□□□□ -2.32
YBX3-214ENST00000544501 FDCSPQ8NFU4 85 aa0.56□□□□□ -2.32
YBX3-214ENST00000544501 RAB2BQ8WUD1 216 aa0.56□□□□□ -2.32
YBX3-214ENST00000544501 EEF1AKMT1Q8WVE0 214 aa0.56□□□□□ -2.32
YBX3-214ENST00000544501 ASB13Q8WXK3 278 aa0.56□□□□□ -2.32
YBX3-214ENST00000544501 ATP6V1G3Q96LB4 118 aa0.56□□□□□ -2.32
YBX3-214ENST00000544501 CCL13Q99616 98 aa0.56□□□□□ -2.32
YBX3-214ENST00000544501 REG4Q9BYZ8 158 aa0.56□□□□□ -2.32
YBX3-214ENST00000544501 DRC3Q9H069 523 aa0.56□□□□□ -2.32
YBX3-214ENST00000544501 MS4A6AQ9H2W1 248 aa0.56□□□□□ -2.32
YBX3-214ENST00000544501 CST9LQ9H4G1 147 aa0.56□□□□□ -2.32
YBX3-214ENST00000544501 WDR54Q9H977 334 aa0.56□□□□□ -2.32
YBX3-214ENST00000544501 HES4Q9HCC6 221 aa0.56□□□□□ -2.32
YBX3-214ENST00000544501 MED9Q9NWA0 146 aa0.56□□□□□ -2.32
YBX3-214ENST00000544501 ZNHIT6Q9NWK9 470 aaKnown RBP0.56□□□□□ -2.32
YBX3-214ENST00000544501 GINS2Q9Y248 185 aa0.56□□□□□ -2.32
YBX3-214ENST00000544501 C15orf41Q9Y2V0 281 aa0.56□□□□□ -2.32
YBX3-214ENST00000544501 TIMM9Q9Y5J7 89 aa0.56□□□□□ -2.32
YBX3-214ENST00000544501 MYO18AQ92614 2054 aaKnown RBP0.56□□□□□ -2.32
YBX3-214ENST00000544501 DOCK5Q9H7D0 1870 aa0.56□□□□□ -2.32
YBX3-214ENST00000544501 MALRD1Q5VYJ5 2156 aa0.56□□□□□ -2.32
YBX3-214ENST00000544501 MYOFQ9NZM1 2061 aa0.55□□□□□ -2.32
YBX3-214ENST00000544501 MYO5AQ9Y4I1 1855 aaKnown RBP0.55□□□□□ -2.32
YBX3-214ENST00000544501 IGKV3-7A0A075B6H7 116 aa0.55□□□□□ -2.32
YBX3-214ENST00000544501 TRAV7A0A075B6U4 112 aa0.55□□□□□ -2.32
YBX3-214ENST00000544501 IGHV1-18A0A0C4DH31 117 aa0.55□□□□□ -2.32
YBX3-214ENST00000544501 FABP12A6NFH5 140 aa0.55□□□□□ -2.32
YBX3-214ENST00000544501 GOLGA6L10A6NI86 522 aa0.55□□□□□ -2.32
YBX3-214ENST00000544501 HMSDA8MTL9 139 aa0.55□□□□□ -2.32
YBX3-214ENST00000544501 F5H768 121 aa0.55□□□□□ -2.32
YBX3-214ENST00000544501 H3BT86 120 aa0.55□□□□□ -2.32
YBX3-214ENST00000544501 BIRC5O15392 142 aa0.55□□□□□ -2.32
YBX3-214ENST00000544501 PLA2G10O15496 165 aa0.55□□□□□ -2.32
YBX3-214ENST00000544501 CALUO43852 315 aaPredicted RBP0.55□□□□□ -2.32
YBX3-214ENST00000544501 CREBL2O60519 120 aaPredicted RBP0.55□□□□□ -2.32
YBX3-214ENST00000544501 HPGDSO60760 199 aa0.55□□□□□ -2.32
YBX3-214ENST00000544501 APOMO95445 188 aa0.55□□□□□ -2.32
YBX3-214ENST00000544501 APODP05090 189 aa0.55□□□□□ -2.32
YBX3-214ENST00000544501 OCMP0CE72 109 aaPredicted RBP0.55□□□□□ -2.32
YBX3-214ENST00000544501 CCR7P32248 378 aa0.55□□□□□ -2.32
YBX3-214ENST00000544501 AQP4P55087 323 aa0.55□□□□□ -2.32
YBX3-214ENST00000544501 HIST1H4AP62805 103 aaKnown RBP0.55□□□□□ -2.32
YBX3-214ENST00000544501 RSU1Q15404 277 aa0.55□□□□□ -2.32
YBX3-214ENST00000544501 SLC36A2Q495M3 483 aa0.55□□□□□ -2.32
YBX3-214ENST00000544501 FP248Q71RG6 208 aaPredicted RBP0.55□□□□□ -2.32
YBX3-214ENST00000544501 SLC51BQ86UW2 128 aa0.55□□□□□ -2.32
YBX3-214ENST00000544501 COMMD7Q86VX2 200 aa0.55□□□□□ -2.32
YBX3-214ENST00000544501 RPS19BP1Q86WX3 136 aaKnown RBP0.55□□□□□ -2.32
YBX3-214ENST00000544501 GPHB5Q86YW7 130 aa0.55□□□□□ -2.32
YBX3-214ENST00000544501 DYNAPQ8N1N2 210 aa0.55□□□□□ -2.32
YBX3-214ENST00000544501 UBL4BQ8N7F7 174 aa0.55□□□□□ -2.32
YBX3-214ENST00000544501 OR7G1Q8NGA0 311 aa0.55□□□□□ -2.32
YBX3-214ENST00000544501 OR2T27Q8NH04 317 aa0.55□□□□□ -2.32
YBX3-214ENST00000544501 MBD3L1Q8WWY6 194 aa0.55□□□□□ -2.32
YBX3-214ENST00000544501 TMA16Q96EY4 203 aaKnown RBP0.55□□□□□ -2.32
YBX3-214ENST00000544501 ANKRD36BP1Q96IX9 119 aa0.55□□□□□ -2.32
YBX3-214ENST00000544501 PACRGQ96M98 296 aaPredicted RBP0.55□□□□□ -2.32
YBX3-214ENST00000544501 IMMP2LQ96T52 175 aa0.55□□□□□ -2.32
YBX3-214ENST00000544501 CCL19Q99731 98 aa0.55□□□□□ -2.32
YBX3-214ENST00000544501 DHRS9Q9BPW9 319 aa0.55□□□□□ -2.32
YBX3-214ENST00000544501 DDA1Q9BW61 102 aa0.55□□□□□ -2.32
YBX3-214ENST00000544501 XAGE1AQ9HD64 81 aa0.55□□□□□ -2.32
YBX3-214ENST00000544501 EURLQ9NYK6 297 aa0.55□□□□□ -2.32
YBX3-214ENST00000544501 NAT8Q9UHE5 227 aa0.55□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms