RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 DEFA1P59665 94 aa7.16□□□□□ -1.26
YBX3-212ENST00000542002 DEFA3P59666 94 aa7.16□□□□□ -1.26
YBX3-212ENST00000542002 AKR1C1Q04828 323 aa7.16□□□□□ -1.26
YBX3-212ENST00000542002 PATE2Q6UY27 113 aa7.16□□□□□ -1.26
YBX3-212ENST00000542002 SIGLEC15Q6ZMC9 328 aa7.16□□□□□ -1.26
YBX3-212ENST00000542002 CYP2G1PQ6ZSU1 146 aa7.16□□□□□ -1.26
YBX3-212ENST00000542002 OR10P1Q8NGE3 313 aa7.16□□□□□ -1.26
YBX3-212ENST00000542002 GRAMD2BQ96HH9 432 aa7.16□□□□□ -1.26
YBX3-212ENST00000542002 GPN1Q9HCN4 374 aaPredicted RBP7.16□□□□□ -1.26
YBX3-212ENST00000542002 NPVFQ9HCQ7 196 aa7.16□□□□□ -1.26
YBX3-212ENST00000542002 HELTA6NFD8 242 aa7.15□□□□□ -1.26
YBX3-212ENST00000542002 KNCNA6PVL3 124 aa7.15□□□□□ -1.26
YBX3-212ENST00000542002 FNDC10F2Z333 226 aa7.15□□□□□ -1.26
YBX3-212ENST00000542002 L7N2F9 121 aa7.15□□□□□ -1.26
YBX3-212ENST00000542002 PRAF2O60831 178 aa7.15□□□□□ -1.26
YBX3-212ENST00000542002 GIG44P09565 113 aaPredicted RBP7.15□□□□□ -1.26
YBX3-212ENST00000542002 BCAP31P51572 246 aa7.15□□□□□ -1.26
YBX3-212ENST00000542002 CAV2P51636 162 aa7.15□□□□□ -1.26
YBX3-212ENST00000542002 AP2S1P53680 142 aaPredicted RBP7.15□□□□□ -1.26
YBX3-212ENST00000542002 CMC4P56277 68 aaPredicted RBP7.15□□□□□ -1.26
YBX3-212ENST00000542002 DEFB1P60022 68 aa7.15□□□□□ -1.26
YBX3-212ENST00000542002 S100A10P60903 97 aa7.15□□□□□ -1.26
YBX3-212ENST00000542002 VAMP2P63027 116 aa7.15□□□□□ -1.26
YBX3-212ENST00000542002 SLC38A11Q08AI6 406 aa7.15□□□□□ -1.26
YBX3-212ENST00000542002 TMEM252Q8N6L7 170 aa7.15□□□□□ -1.26
YBX3-212ENST00000542002 TMEM217Q8N7C4 229 aa7.15□□□□□ -1.26
YBX3-212ENST00000542002 NARS2Q96I59 477 aaKnown RBP7.15□□□□□ -1.26
YBX3-212ENST00000542002 MGST2Q99735 147 aa7.15□□□□□ -1.26
YBX3-212ENST00000542002 RNF126Q9BV68 326 aa7.15□□□□□ -1.26
YBX3-212ENST00000542002 GGACTQ9BVM4 153 aa7.15□□□□□ -1.26
YBX3-212ENST00000542002 LYRM2Q9NU23 88 aaPredicted RBP7.15□□□□□ -1.26
YBX3-212ENST00000542002 OR5AC2Q9NZP5 309 aa7.15□□□□□ -1.26
YBX3-212ENST00000542002 SLC45A2Q9UMX9 530 aa7.15□□□□□ -1.26
YBX3-212ENST00000542002 STAB2Q8WWQ8 2551 aa7.15□□□□□ -1.26
YBX3-212ENST00000542002 KIR2DL5BA0A0G2JN68 375 aa7.14□□□□□ -1.27
YBX3-212ENST00000542002 KIR2DL5BA0A0G2JPC4 375 aa7.14□□□□□ -1.27
YBX3-212ENST00000542002 ZNF98A6NK75 572 aa7.14□□□□□ -1.27
YBX3-212ENST00000542002 SOCS3O14543 225 aa7.14□□□□□ -1.27
YBX3-212ENST00000542002 FABP1P07148 127 aa7.14□□□□□ -1.27
YBX3-212ENST00000542002 LINC00869P0C866 280 aa7.14□□□□□ -1.27
YBX3-212ENST00000542002 NHLH2Q02577 135 aa7.14□□□□□ -1.27
YBX3-212ENST00000542002 C1orf194Q5T5A4 169 aa7.14□□□□□ -1.27
YBX3-212ENST00000542002 TEPPQ6URK8 271 aa7.14□□□□□ -1.27
YBX3-212ENST00000542002 KIR2DL5AQ8N109 375 aa7.14□□□□□ -1.27
YBX3-212ENST00000542002 BPIFCQ8NFQ6 507 aa7.14□□□□□ -1.27
YBX3-212ENST00000542002 OR1B1Q8NGR6 318 aa7.14□□□□□ -1.27
YBX3-212ENST00000542002 KIR2DL5BQ8NHK3 375 aa7.14□□□□□ -1.27
YBX3-212ENST00000542002 NMES1Q9C002 83 aa7.14□□□□□ -1.27
YBX3-212ENST00000542002 NRN1Q9NPD7 142 aa7.14□□□□□ -1.27
YBX3-212ENST00000542002 DOK5Q9P104 306 aa7.14□□□□□ -1.27
YBX3-212ENST00000542002 AGPAT2O15120 278 aa7.13□□□□□ -1.27
YBX3-212ENST00000542002 CFDP00746 253 aaPredicted RBP7.13□□□□□ -1.27
YBX3-212ENST00000542002 CXCL3P19876 107 aa7.13□□□□□ -1.27
YBX3-212ENST00000542002 SULT1A1P50225 295 aa7.13□□□□□ -1.27
YBX3-212ENST00000542002 APOC4P55056 127 aa7.13□□□□□ -1.27
YBX3-212ENST00000542002 PLP1P60201 277 aa7.13□□□□□ -1.27
YBX3-212ENST00000542002 EWSR1Q01844 656 aaKnown RBP eCLIP7.13□□□□□ -1.27
YBX3-212ENST00000542002 VWC2Q2TAL6 325 aa7.13□□□□□ -1.27
YBX3-212ENST00000542002 DEFB135Q30KP9 77 aa7.13□□□□□ -1.27
YBX3-212ENST00000542002 LRRC37A5PQ49AS3 106 aa7.13□□□□□ -1.27
YBX3-212ENST00000542002 PSMG4Q5JS54 123 aa7.13□□□□□ -1.27
YBX3-212ENST00000542002 Q6ZWC4 215 aa7.13□□□□□ -1.27
YBX3-212ENST00000542002 TRPT1Q86TN4 253 aaKnown RBP7.13□□□□□ -1.27
YBX3-212ENST00000542002 OR8I2Q8N0Y5 310 aa7.13□□□□□ -1.27
YBX3-212ENST00000542002 RNF183Q96D59 192 aa7.13□□□□□ -1.27
YBX3-212ENST00000542002 UHRF2Q96PU4 802 aa7.13□□□□□ -1.27
YBX3-212ENST00000542002 RSG1Q9BU20 258 aa7.13□□□□□ -1.27
YBX3-212ENST00000542002 SCRT1Q9BWW7 348 aa7.13□□□□□ -1.27
YBX3-212ENST00000542002 SLC25A39Q9BZJ4 359 aaPredicted RBP7.13□□□□□ -1.27
YBX3-212ENST00000542002 CSTL1Q9H114 145 aa7.13□□□□□ -1.27
YBX3-212ENST00000542002 SLC25A32Q9H2D1 315 aa7.13□□□□□ -1.27
YBX3-212ENST00000542002 MGAT4CQ9UBM8 478 aa7.13□□□□□ -1.27
YBX3-212ENST00000542002 ALG5Q9Y673 324 aa7.13□□□□□ -1.27
YBX3-212ENST00000542002 RYR3Q15413 4870 aa7.13□□□□□ -1.27
YBX3-212ENST00000542002 H3BRN7 92 aa7.12□□□□□ -1.27
YBX3-212ENST00000542002 UBE2CO00762 179 aa7.12□□□□□ -1.27
YBX3-212ENST00000542002 SPRY2O43597 315 aa7.12□□□□□ -1.27
YBX3-212ENST00000542002 SSNA1O43805 119 aa7.12□□□□□ -1.27
YBX3-212ENST00000542002 HYPMO75409 117 aa7.12□□□□□ -1.27
YBX3-212ENST00000542002 PVALBP20472 110 aaPredicted RBP7.12□□□□□ -1.27
YBX3-212ENST00000542002 LORP23490 312 aaPredicted RBP7.12□□□□□ -1.27
YBX3-212ENST00000542002 SELENOTP62341 195 aa7.12□□□□□ -1.27
YBX3-212ENST00000542002 ACTL10Q5JWF8 245 aa7.12□□□□□ -1.27
YBX3-212ENST00000542002 GDF5OSQ5U4N7 250 aa7.12□□□□□ -1.27
YBX3-212ENST00000542002 MORN5Q5VZ52 161 aa7.12□□□□□ -1.27
YBX3-212ENST00000542002 IGFL4Q6B9Z1 124 aa7.12□□□□□ -1.27
YBX3-212ENST00000542002 MUC7Q8TAX7 377 aa7.12□□□□□ -1.27
YBX3-212ENST00000542002 PPP1R1CQ8WVI7 109 aa7.12□□□□□ -1.27
YBX3-212ENST00000542002 TMEM37Q8WXS4 190 aa7.12□□□□□ -1.27
YBX3-212ENST00000542002 PPP1R14BQ96C90 147 aa7.12□□□□□ -1.27
YBX3-212ENST00000542002 C20orf173Q96LM9 149 aa7.12□□□□□ -1.27
YBX3-212ENST00000542002 SHANK2-AS3Q9BTD1 123 aa7.12□□□□□ -1.27
YBX3-212ENST00000542002 TMEM147Q9BVK8 224 aa7.12□□□□□ -1.27
YBX3-212ENST00000542002 ARL6Q9H0F7 186 aa7.12□□□□□ -1.27
YBX3-212ENST00000542002 SLC25A22Q9H936 323 aa7.12□□□□□ -1.27
YBX3-212ENST00000542002 WDR83OSQ9Y284 106 aa7.12□□□□□ -1.27
YBX3-212ENST00000542002 TRAV8-2A0A0B4J237 113 aa7.11□□□□□ -1.27
YBX3-212ENST00000542002 PTTG1O95997 202 aa7.11□□□□□ -1.27
YBX3-212ENST00000542002 OR5G3P0C626 314 aa7.11□□□□□ -1.27
YBX3-212ENST00000542002 S100A11P31949 105 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms