RNA–Protein interactions for RNA: ENST00000541416.5

SNHG1-216, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 996 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-216ENST00000541416 CLINT1Q14677 625 aa8.64□□□□□ -1.03
SNHG1-216ENST00000541416 LGI3Q8N145 548 aa8.64□□□□□ -1.03
SNHG1-216ENST00000541416 TMEM229BQ8NBD8 167 aa8.64□□□□□ -1.03
SNHG1-216ENST00000541416 OR4C16Q8NGL9 310 aa8.64□□□□□ -1.03
SNHG1-216ENST00000541416 OR52I2Q8NH67 350 aa8.64□□□□□ -1.03
SNHG1-216ENST00000541416 ZNRF2Q8NHG8 242 aa8.64□□□□□ -1.03
SNHG1-216ENST00000541416 GLYATL2Q8WU03 294 aa8.64□□□□□ -1.03
SNHG1-216ENST00000541416 GPR146Q96CH1 333 aa8.64□□□□□ -1.03
SNHG1-216ENST00000541416 NAA60Q9H7X0 242 aa8.64□□□□□ -1.03
SNHG1-216ENST00000541416 SCRT2Q9NQ03 307 aa8.64□□□□□ -1.03
SNHG1-216ENST00000541416 PIGBOS1A0A0B4J2F0 54 aa8.63□□□□□ -1.03
SNHG1-216ENST00000541416 F5H768 121 aa8.63□□□□□ -1.03
SNHG1-216ENST00000541416 SOCS3O14543 225 aa8.63□□□□□ -1.03
SNHG1-216ENST00000541416 NXPH3O95157 252 aa8.63□□□□□ -1.03
SNHG1-216ENST00000541416 ATP5G1P05496 136 aa8.63□□□□□ -1.03
SNHG1-216ENST00000541416 DEFB130BP0DP73 79 aa8.63□□□□□ -1.03
SNHG1-216ENST00000541416 DEFB130AP0DP74 79 aa8.63□□□□□ -1.03
SNHG1-216ENST00000541416 TSPOP30536 169 aa8.63□□□□□ -1.03
SNHG1-216ENST00000541416 ATP5G3P48201 142 aa8.63□□□□□ -1.03
SNHG1-216ENST00000541416 MEF2DQ14814 521 aa8.63□□□□□ -1.03
SNHG1-216ENST00000541416 SURF2Q15527 256 aaPredicted RBP8.63□□□□□ -1.03
SNHG1-216ENST00000541416 TTC32Q5I0X7 151 aa8.63□□□□□ -1.03
SNHG1-216ENST00000541416 STEAP1BQ6NZ63 245 aa8.63□□□□□ -1.03
SNHG1-216ENST00000541416 SELENOHQ8IZQ5 122 aaKnown RBP8.63□□□□□ -1.03
SNHG1-216ENST00000541416 DTD1Q8TEA8 209 aa8.63□□□□□ -1.03
SNHG1-216ENST00000541416 TMEM170AQ8WVE7 144 aa8.63□□□□□ -1.03
SNHG1-216ENST00000541416 YIPF6Q96EC8 236 aa8.63□□□□□ -1.03
SNHG1-216ENST00000541416 KCNIP3Q9Y2W7 256 aa8.63□□□□□ -1.03
SNHG1-216ENST00000541416 A0A087WXM4 84 aa8.62□□□□□ -1.03
SNHG1-216ENST00000541416 DISC1C4P0D8 188 aa8.62□□□□□ -1.03
SNHG1-216ENST00000541416 F6UB75 175 aa8.62□□□□□ -1.03
SNHG1-216ENST00000541416 ATP6V1G2O95670 118 aa8.62□□□□□ -1.03
SNHG1-216ENST00000541416 ZNF90Q03938 601 aa8.62□□□□□ -1.03
SNHG1-216ENST00000541416 SSBP1Q04837 148 aaKnown RBP8.62□□□□□ -1.03
SNHG1-216ENST00000541416 GPR107Q5VW38 600 aa8.62□□□□□ -1.03
SNHG1-216ENST00000541416 GPR141Q7Z602 305 aa8.62□□□□□ -1.03
SNHG1-216ENST00000541416 LHFPL5Q8TAF8 219 aa8.62□□□□□ -1.03
SNHG1-216ENST00000541416 IL22RA2Q969J5 263 aa8.62□□□□□ -1.03
SNHG1-216ENST00000541416 HERC1Q15751 4861 aa8.62□□□□□ -1.03
SNHG1-216ENST00000541416 CBY3A6NI87 242 aa8.61□□□□□ -1.03
SNHG1-216ENST00000541416 ZNF182P17025 639 aaPredicted RBP8.61□□□□□ -1.03
SNHG1-216ENST00000541416 CCR6P51684 374 aa8.61□□□□□ -1.03
SNHG1-216ENST00000541416 RAB11AP62491 216 aa8.61□□□□□ -1.03
SNHG1-216ENST00000541416 GAMTQ14353 236 aa8.61□□□□□ -1.03
SNHG1-216ENST00000541416 GGNBP1Q5YKI7 109 aa8.61□□□□□ -1.03
SNHG1-216ENST00000541416 SPATA12Q7Z6I5 190 aa8.61□□□□□ -1.03
SNHG1-216ENST00000541416 TMEM256Q8N2U0 113 aa8.61□□□□□ -1.03
SNHG1-216ENST00000541416 OR4D10Q8NGI6 311 aa8.61□□□□□ -1.03
SNHG1-216ENST00000541416 GPR82Q96P67 336 aa8.61□□□□□ -1.03
SNHG1-216ENST00000541416 EXTL2Q9UBQ6 330 aa8.61□□□□□ -1.03
SNHG1-216ENST00000541416 SLC45A2Q9UMX9 530 aa8.61□□□□□ -1.03
SNHG1-216ENST00000541416 TMEM56-RWDD3S4R434 201 aa8.61□□□□□ -1.03
SNHG1-216ENST00000541416 DNAH5Q8TE73 4624 aa8.61□□□□□ -1.03
SNHG1-216ENST00000541416 CRYM-AS1A6NIL9 109 aa8.6□□□□□ -1.03
SNHG1-216ENST00000541416 A8MTW9 85 aa8.6□□□□□ -1.03
SNHG1-216ENST00000541416 ZNF705GA8MUZ8 300 aaPredicted RBP8.6□□□□□ -1.03
SNHG1-216ENST00000541416 NCS1P62166 190 aa8.6□□□□□ -1.03
SNHG1-216ENST00000541416 MRPS10P82664 201 aaKnown RBP8.6□□□□□ -1.03
SNHG1-216ENST00000541416 SMCO1Q147U7 214 aa8.6□□□□□ -1.03
SNHG1-216ENST00000541416 SPINK13Q1W4C9 94 aa8.6□□□□□ -1.03
SNHG1-216ENST00000541416 OR4D5Q8NGN0 318 aa8.6□□□□□ -1.03
SNHG1-216ENST00000541416 OR1B1Q8NGR6 318 aa8.6□□□□□ -1.03
SNHG1-216ENST00000541416 SCGB3A2Q96PL1 93 aa8.6□□□□□ -1.03
SNHG1-216ENST00000541416 TRGV9Q99603 122 aa8.6□□□□□ -1.03
SNHG1-216ENST00000541416 PRRT1Q99946 306 aa8.6□□□□□ -1.03
SNHG1-216ENST00000541416 RTBDNQ9BSG5 229 aaPredicted RBP8.6□□□□□ -1.03
SNHG1-216ENST00000541416 PPP1R14DQ9NXH3 145 aa8.6□□□□□ -1.03
SNHG1-216ENST00000541416 HSPB7Q9UBY9 170 aa8.6□□□□□ -1.03
SNHG1-216ENST00000541416 ADAP1O75689 374 aa8.59□□□□□ -1.03
SNHG1-216ENST00000541416 ANXA3P12429 323 aa8.59□□□□□ -1.03
SNHG1-216ENST00000541416 AKR1C4P17516 323 aa8.59□□□□□ -1.03
SNHG1-216ENST00000541416 BTF3P20290 206 aaKnown RBP8.59□□□□□ -1.03
SNHG1-216ENST00000541416 CNN1P51911 297 aaKnown RBP8.59□□□□□ -1.03
SNHG1-216ENST00000541416 VBP1P61758 197 aa8.59□□□□□ -1.03
SNHG1-216ENST00000541416 SRPXP78539 464 aa8.59□□□□□ -1.03
SNHG1-216ENST00000541416 OR2F1Q13607 317 aa8.59□□□□□ -1.03
SNHG1-216ENST00000541416 AMTNQ6UX39 209 aa8.59□□□□□ -1.03
SNHG1-216ENST00000541416 SSX7Q7RTT5 188 aa8.59□□□□□ -1.03
SNHG1-216ENST00000541416 OR10J6PQ8NGY7 276 aa8.59□□□□□ -1.03
SNHG1-216ENST00000541416 C16orf74Q96GX8 76 aa8.59□□□□□ -1.03
SNHG1-216ENST00000541416 RSG1Q9BU20 258 aa8.59□□□□□ -1.03
SNHG1-216ENST00000541416 RBKSQ9H477 322 aa8.59□□□□□ -1.03
SNHG1-216ENST00000541416 Q9H8V8 135 aa8.59□□□□□ -1.03
SNHG1-216ENST00000541416 SLC25A22Q9H936 323 aa8.59□□□□□ -1.03
SNHG1-216ENST00000541416 PTTG2Q9NZH5 202 aa8.59□□□□□ -1.03
SNHG1-216ENST00000541416 LINC00588Q9Y4M8 146 aa8.59□□□□□ -1.03
SNHG1-216ENST00000541416 IGKV1D-37A0A075B6S9 117 aa8.58□□□□□ -1.04
SNHG1-216ENST00000541416 A0A0B4J2A0 478 aa8.58□□□□□ -1.04
SNHG1-216ENST00000541416 M0R2Z0 102 aa8.58□□□□□ -1.04
SNHG1-216ENST00000541416 RPP30P78346 268 aaKnown RBP8.58□□□□□ -1.04
SNHG1-216ENST00000541416 OR11H7Q8NGC8 314 aa8.58□□□□□ -1.04
SNHG1-216ENST00000541416 OR1S1Q8NH92 325 aa8.58□□□□□ -1.04
SNHG1-216ENST00000541416 LINC01587Q99440 93 aa8.58□□□□□ -1.04
SNHG1-216ENST00000541416 FUNDC2Q9BWH2 189 aa8.58□□□□□ -1.04
SNHG1-216ENST00000541416 SLC25A32Q9H2D1 315 aa8.58□□□□□ -1.04
SNHG1-216ENST00000541416 SHPKQ9UHJ6 478 aa8.58□□□□□ -1.04
SNHG1-216ENST00000541416 GPR132Q9UNW8 380 aa8.58□□□□□ -1.04
SNHG1-216ENST00000541416 TIMM8BQ9Y5J9 83 aaPredicted RBP8.58□□□□□ -1.04
SNHG1-216ENST00000541416 A0A1W2PPQ1 181 aa8.57□□□□□ -1.04
SNHG1-216ENST00000541416 ZNF98A6NK75 572 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 191.5 ms