RNA–Protein interactions for RNA: ENST00000541366.1

COPA-205, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-205ENST00000541366 PRB4P10163 310 aaPredicted RBP8.12□□□□□ -1.11
COPA-205ENST00000541366 HTN1P15515 57 aa8.12□□□□□ -1.11
COPA-205ENST00000541366 CNN1P51911 297 aaKnown RBP8.12□□□□□ -1.11
COPA-205ENST00000541366 LYZP61626 148 aa8.12□□□□□ -1.11
COPA-205ENST00000541366 SUPT4H1P63272 117 aaKnown RBP8.12□□□□□ -1.11
COPA-205ENST00000541366 RNASE11Q8TAA1 199 aaKnown RBP8.12□□□□□ -1.11
COPA-205ENST00000541366 GNPNAT1Q96EK6 184 aaPredicted RBP8.12□□□□□ -1.11
COPA-205ENST00000541366 RRNAD1Q96FB5 475 aaKnown RBP8.12□□□□□ -1.11
COPA-205ENST00000541366 C16orf92Q96LL3 132 aa8.12□□□□□ -1.11
COPA-205ENST00000541366 RPRMQ9NS64 109 aa8.12□□□□□ -1.11
COPA-205ENST00000541366 LRP1Q07954 4544 aaKnown RBP8.11□□□□□ -1.11
COPA-205ENST00000541366 IGKV1D-37A0A075B6S9 117 aa8.11□□□□□ -1.11
COPA-205ENST00000541366 A0A1W2PPQ1 181 aa8.11□□□□□ -1.11
COPA-205ENST00000541366 CEBPZOSA8MTT3 80 aa8.11□□□□□ -1.11
COPA-205ENST00000541366 TSPOP30536 169 aa8.11□□□□□ -1.11
COPA-205ENST00000541366 RCVRNP35243 200 aa8.11□□□□□ -1.11
COPA-205ENST00000541366 MEF2DQ14814 521 aa8.11□□□□□ -1.11
COPA-205ENST00000541366 AARDQ4LEZ3 155 aa8.11□□□□□ -1.11
COPA-205ENST00000541366 OR8G2PQ6IF36 304 aa8.11□□□□□ -1.11
COPA-205ENST00000541366 SNX29P2Q8IUI4 249 aa8.11□□□□□ -1.11
COPA-205ENST00000541366 LHFPL5Q8TAF8 219 aa8.11□□□□□ -1.11
COPA-205ENST00000541366 UPK3BQ9BT76 320 aa8.11□□□□□ -1.11
COPA-205ENST00000541366 SLC25A39Q9BZJ4 359 aaPredicted RBP8.11□□□□□ -1.11
COPA-205ENST00000541366 PTTG2Q9NZH5 202 aa8.11□□□□□ -1.11
COPA-205ENST00000541366 ATG12O94817 140 aa8.1□□□□□ -1.11
COPA-205ENST00000541366 HOXA5P20719 270 aa8.1□□□□□ -1.11
COPA-205ENST00000541366 UCP1P25874 307 aa8.1□□□□□ -1.11
COPA-205ENST00000541366 GABARAPL2P60520 117 aa8.1□□□□□ -1.11
COPA-205ENST00000541366 OR2F1Q13607 317 aa8.1□□□□□ -1.11
COPA-205ENST00000541366 RNASE12Q5GAN4 147 aaKnown RBP8.1□□□□□ -1.11
COPA-205ENST00000541366 ETFRF1Q6IPR1 90 aa8.1□□□□□ -1.11
COPA-205ENST00000541366 IZUMO2Q6UXV1 221 aa8.1□□□□□ -1.11
COPA-205ENST00000541366 OR8I2Q8N0Y5 310 aa8.1□□□□□ -1.11
COPA-205ENST00000541366 ARRDC1Q8N5I2 433 aa8.1□□□□□ -1.11
COPA-205ENST00000541366 RNF182Q8N6D2 247 aa8.1□□□□□ -1.11
COPA-205ENST00000541366 OR52E5Q8NH55 327 aa8.1□□□□□ -1.11
COPA-205ENST00000541366 RXFP4Q8TDU9 374 aa8.1□□□□□ -1.11
COPA-205ENST00000541366 PPP1R14BQ96C90 147 aa8.1□□□□□ -1.11
COPA-205ENST00000541366 LINC01587Q99440 93 aa8.1□□□□□ -1.11
COPA-205ENST00000541366 NOP10Q9NPE3 64 aaKnown RBP8.1□□□□□ -1.11
COPA-205ENST00000541366 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.1□□□□□ -1.11
COPA-205ENST00000541366 CACNG5Q9UF02 275 aa8.1□□□□□ -1.11
COPA-205ENST00000541366 MRPS16Q9Y3D3 137 aaKnown RBP8.1□□□□□ -1.11
COPA-205ENST00000541366 ZFP92A6NM28 416 aa8.09□□□□□ -1.11
COPA-205ENST00000541366 ZNF701M0R085 212 aaPredicted RBP8.09□□□□□ -1.11
COPA-205ENST00000541366 NUP62P37198 522 aaPredicted RBP8.09□□□□□ -1.11
COPA-205ENST00000541366 KLF9Q13886 244 aaPredicted RBP8.09□□□□□ -1.11
COPA-205ENST00000541366 ICAM4Q14773 271 aa8.09□□□□□ -1.11
COPA-205ENST00000541366 NMSQ5H8A3 153 aa8.09□□□□□ -1.11
COPA-205ENST00000541366 C1orf194Q5T5A4 169 aa8.09□□□□□ -1.11
COPA-205ENST00000541366 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.09□□□□□ -1.11
COPA-205ENST00000541366 LHFPL1Q86WI0 220 aa8.09□□□□□ -1.11
COPA-205ENST00000541366 ZNF486Q96H40 463 aaPredicted RBP8.09□□□□□ -1.11
COPA-205ENST00000541366 RSG1Q9BU20 258 aa8.09□□□□□ -1.11
COPA-205ENST00000541366 SLC25A32Q9H2D1 315 aa8.09□□□□□ -1.11
COPA-205ENST00000541366 COPZ2Q9P299 210 aa8.09□□□□□ -1.11
COPA-205ENST00000541366 TRAV8-2A0A0B4J237 113 aa8.08□□□□□ -1.12
COPA-205ENST00000541366 OR5AC1P0C628 307 aa8.08□□□□□ -1.12
COPA-205ENST00000541366 M6PRP20645 277 aa8.08□□□□□ -1.12
COPA-205ENST00000541366 RPS19P39019 145 aaKnown RBP8.08□□□□□ -1.12
COPA-205ENST00000541366 ERVFC1-1P60608 527 aa8.08□□□□□ -1.12
COPA-205ENST00000541366 GAMTQ14353 236 aa8.08□□□□□ -1.12
COPA-205ENST00000541366 Q6ZSN1 163 aa8.08□□□□□ -1.12
COPA-205ENST00000541366 SLC25A22Q9H936 323 aa8.08□□□□□ -1.12
COPA-205ENST00000541366 PFDN2Q9UHV9 154 aa8.08□□□□□ -1.12
COPA-205ENST00000541366 TIMM8BQ9Y5J9 83 aaPredicted RBP8.08□□□□□ -1.12
COPA-205ENST00000541366 FAM229AH3BQW9 127 aa8.07□□□□□ -1.12
COPA-205ENST00000541366 EREGO14944 169 aa8.07□□□□□ -1.12
COPA-205ENST00000541366 DUSP14O95147 198 aaKnown RBP8.07□□□□□ -1.12
COPA-205ENST00000541366 CDS2O95674 445 aa8.07□□□□□ -1.12
COPA-205ENST00000541366 B2MP61769 119 aa8.07□□□□□ -1.12
COPA-205ENST00000541366 CDPF1Q6NVV7 123 aa8.07□□□□□ -1.12
COPA-205ENST00000541366 GPR141Q7Z602 305 aa8.07□□□□□ -1.12
COPA-205ENST00000541366 SELENOHQ8IZQ5 122 aaKnown RBP8.07□□□□□ -1.12
COPA-205ENST00000541366 OR4D10Q8NGI6 311 aa8.07□□□□□ -1.12
COPA-205ENST00000541366 OR13C8Q8NGS7 320 aa8.07□□□□□ -1.12
COPA-205ENST00000541366 GLYATL2Q8WU03 294 aa8.07□□□□□ -1.12
COPA-205ENST00000541366 C16orf74Q96GX8 76 aa8.07□□□□□ -1.12
COPA-205ENST00000541366 TMEM222Q9H0R3 208 aa8.07□□□□□ -1.12
COPA-205ENST00000541366 GAGE12BA1L429 117 aa8.06□□□□□ -1.12
COPA-205ENST00000541366 BOLA2-SMG1P6H3BVE0 249 aa8.06□□□□□ -1.12
COPA-205ENST00000541366 GAGE7O76087 117 aa8.06□□□□□ -1.12
COPA-205ENST00000541366 IFNA5P01569 189 aa8.06□□□□□ -1.12
COPA-205ENST00000541366 CD3DP04234 171 aa8.06□□□□□ -1.12
COPA-205ENST00000541366 GAGE12FP0CL80 117 aa8.06□□□□□ -1.12
COPA-205ENST00000541366 GAGE12GP0CL81 117 aa8.06□□□□□ -1.12
COPA-205ENST00000541366 GAGE12IP0CL82 117 aa8.06□□□□□ -1.12
COPA-205ENST00000541366 TAS2R60P59551 318 aa8.06□□□□□ -1.12
COPA-205ENST00000541366 LSM3P62310 102 aaKnown RBP8.06□□□□□ -1.12
COPA-205ENST00000541366 TMEM144Q7Z5S9 345 aa8.06□□□□□ -1.12
COPA-205ENST00000541366 FAM219AQ8IW50 185 aa8.06□□□□□ -1.12
COPA-205ENST00000541366 MARCH1Q8TCQ1 289 aa8.06□□□□□ -1.12
COPA-205ENST00000541366 RNASE8Q8TDE3 154 aaKnown RBP8.06□□□□□ -1.12
COPA-205ENST00000541366 ZNF503Q96F45 646 aa8.06□□□□□ -1.12
COPA-205ENST00000541366 FAT3Q8TDW7 4589 aa8.05□□□□□ -1.12
COPA-205ENST00000541366 IGKV1OR2-108A0A075B7D4 117 aa8.05□□□□□ -1.12
COPA-205ENST00000541366 A0A087WTM6 91 aa8.05□□□□□ -1.12
COPA-205ENST00000541366 ZNF98A6NK75 572 aa8.05□□□□□ -1.12
COPA-205ENST00000541366 SNRPGP15A8MWD9 76 aa8.05□□□□□ -1.12
COPA-205ENST00000541366 TMEM127O75204 238 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms