RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 SPP1P10451 314 aa7.12□□□□□ -1.27
DDX55-208ENST00000541259 TPT1P13693 172 aaKnown RBP7.12□□□□□ -1.27
DDX55-208ENST00000541259 ORM2P19652 201 aa7.12□□□□□ -1.27
DDX55-208ENST00000541259 ZP3P21754 424 aa7.12□□□□□ -1.27
DDX55-208ENST00000541259 MYCNOSP40205 109 aa7.12□□□□□ -1.27
DDX55-208ENST00000541259 ELLP55199 621 aaPredicted RBP7.12□□□□□ -1.27
DDX55-208ENST00000541259 FAM106AQ4KMX7 169 aa7.12□□□□□ -1.27
DDX55-208ENST00000541259 FFAR4Q5NUL3 377 aa7.12□□□□□ -1.27
DDX55-208ENST00000541259 OR1B1Q8NGR6 318 aa7.12□□□□□ -1.27
DDX55-208ENST00000541259 OR2G3Q8NGZ4 309 aa7.12□□□□□ -1.27
DDX55-208ENST00000541259 TMEM37Q8WXS4 190 aa7.12□□□□□ -1.27
DDX55-208ENST00000541259 TMEM190Q8WZ59 177 aa7.12□□□□□ -1.27
DDX55-208ENST00000541259 RNF125Q96EQ8 232 aa7.12□□□□□ -1.27
DDX55-208ENST00000541259 PBDC1Q9BVG4 233 aa7.12□□□□□ -1.27
DDX55-208ENST00000541259 TIMM9Q9Y5J7 89 aa7.12□□□□□ -1.27
DDX55-208ENST00000541259 IGHV3OR16-13A0A075B7E8 117 aa7.11□□□□□ -1.27
DDX55-208ENST00000541259 IGHV3-49A0A0A0MS15 119 aa7.11□□□□□ -1.27
DDX55-208ENST00000541259 IGHV3-74A0A0B4J1X5 117 aa7.11□□□□□ -1.27
DDX55-208ENST00000541259 EIF3GO75821 320 aaKnown RBP eCLIP7.11□□□□□ -1.27
DDX55-208ENST00000541259 APOHP02749 345 aaPredicted RBP7.11□□□□□ -1.27
DDX55-208ENST00000541259 OR5G3P0C626 314 aa7.11□□□□□ -1.27
DDX55-208ENST00000541259 C4BPBP20851 252 aa7.11□□□□□ -1.27
DDX55-208ENST00000541259 PLP1P60201 277 aa7.11□□□□□ -1.27
DDX55-208ENST00000541259 RAB2AP61019 212 aa7.11□□□□□ -1.27
DDX55-208ENST00000541259 SPATA31B1PQ5VZV4 182 aa7.11□□□□□ -1.27
DDX55-208ENST00000541259 Q6ZRG5 221 aa7.11□□□□□ -1.27
DDX55-208ENST00000541259 C1QL4Q86Z23 238 aa7.11□□□□□ -1.27
DDX55-208ENST00000541259 TMED6Q8WW62 240 aa7.11□□□□□ -1.27
DDX55-208ENST00000541259 GNPNAT1Q96EK6 184 aaPredicted RBP7.11□□□□□ -1.27
DDX55-208ENST00000541259 UHRF2Q96PU4 802 aa7.11□□□□□ -1.27
DDX55-208ENST00000541259 PSMG3Q9BT73 122 aaPredicted RBP7.11□□□□□ -1.27
DDX55-208ENST00000541259 MRPL27Q9P0M9 148 aaKnown RBP7.11□□□□□ -1.27
DDX55-208ENST00000541259 SELENOKQ9Y6D0 94 aa7.11□□□□□ -1.27
DDX55-208ENST00000541259 NOTCH3Q9UM47 2321 aa7.11□□□□□ -1.27
DDX55-208ENST00000541259 TRAV5A0A0B4J249 113 aa7.1□□□□□ -1.27
DDX55-208ENST00000541259 IGHV3-66A0A0C4DH42 116 aa7.1□□□□□ -1.27
DDX55-208ENST00000541259 H3BS24 57 aa7.1□□□□□ -1.27
DDX55-208ENST00000541259 LGALS9O00182 355 aa7.1□□□□□ -1.27
DDX55-208ENST00000541259 COX7A2P2O60397 106 aa7.1□□□□□ -1.27
DDX55-208ENST00000541259 HYPMO75409 117 aa7.1□□□□□ -1.27
DDX55-208ENST00000541259 SEC11BP0C7V7 166 aa7.1□□□□□ -1.27
DDX55-208ENST00000541259 EIF5AP63241 154 aaKnown RBP7.1□□□□□ -1.27
DDX55-208ENST00000541259 MORN5Q5VZ52 161 aa7.1□□□□□ -1.27
DDX55-208ENST00000541259 LEMD1Q68G75 181 aa7.1□□□□□ -1.27
DDX55-208ENST00000541259 IL34Q6ZMJ4 242 aa7.1□□□□□ -1.27
DDX55-208ENST00000541259 ADAMTSL5Q6ZMM2 481 aa7.1□□□□□ -1.27
DDX55-208ENST00000541259 LINC00482Q8N8I6 264 aa7.1□□□□□ -1.27
DDX55-208ENST00000541259 OR4F17Q8NGA8 305 aa7.1□□□□□ -1.27
DDX55-208ENST00000541259 OR4F4Q96R69 305 aa7.1□□□□□ -1.27
DDX55-208ENST00000541259 DNAJC4Q9NNZ3 241 aa7.1□□□□□ -1.27
DDX55-208ENST00000541259 RPRMQ9NS64 109 aa7.1□□□□□ -1.27
DDX55-208ENST00000541259 RABAC1Q9UI14 185 aa7.1□□□□□ -1.27
DDX55-208ENST00000541259 SORL1Q92673 2214 aa7.1□□□□□ -1.27
DDX55-208ENST00000541259 TMEM213A2RRL7 107 aa7.09□□□□□ -1.27
DDX55-208ENST00000541259 C2orf70A6NJV1 201 aa7.09□□□□□ -1.27
DDX55-208ENST00000541259 K7EMT4 169 aa7.09□□□□□ -1.27
DDX55-208ENST00000541259 OVOL1O14753 267 aa7.09□□□□□ -1.27
DDX55-208ENST00000541259 CSN3P07498 182 aa7.09□□□□□ -1.27
DDX55-208ENST00000541259 NPPCP23582 126 aa7.09□□□□□ -1.27
DDX55-208ENST00000541259 CRYBB3P26998 211 aa7.09□□□□□ -1.27
DDX55-208ENST00000541259 FHITP49789 147 aa7.09□□□□□ -1.27
DDX55-208ENST00000541259 SERF2P84101 59 aa7.09□□□□□ -1.27
DDX55-208ENST00000541259 ACOT6Q3I5F7 207 aaPredicted RBP7.09□□□□□ -1.27
DDX55-208ENST00000541259 FAM74A1Q5RGS3 127 aa7.09□□□□□ -1.27
DDX55-208ENST00000541259 C10orf113Q5VZT2 155 aa7.09□□□□□ -1.27
DDX55-208ENST00000541259 ALKAL2Q6UX46 152 aa7.09□□□□□ -1.27
DDX55-208ENST00000541259 SSX7Q7RTT5 188 aa7.09□□□□□ -1.27
DDX55-208ENST00000541259 LINC00305Q7Z4B0 112 aa7.09□□□□□ -1.27
DDX55-208ENST00000541259 OR10G4Q8NGN3 311 aa7.09□□□□□ -1.27
DDX55-208ENST00000541259 OR10G9Q8NGN4 311 aa7.09□□□□□ -1.27
DDX55-208ENST00000541259 OR10G7Q8NGN6 311 aa7.09□□□□□ -1.27
DDX55-208ENST00000541259 OR9G4Q8NGQ1 327 aa7.09□□□□□ -1.27
DDX55-208ENST00000541259 SCRT1Q9BWW7 348 aa7.09□□□□□ -1.27
DDX55-208ENST00000541259 SEPSECSQ9HD40 501 aaKnown RBP7.09□□□□□ -1.27
DDX55-208ENST00000541259 DAZ1Q9NQZ3 744 aaKnown RBP7.09□□□□□ -1.27
DDX55-208ENST00000541259 KCNIP2Q9NS61 270 aa7.09□□□□□ -1.27
DDX55-208ENST00000541259 HIGD1AQ9Y241 93 aa7.09□□□□□ -1.27
DDX55-208ENST00000541259 UFC1Q9Y3C8 167 aa7.09□□□□□ -1.27
DDX55-208ENST00000541259 U3KQE9 123 aa7.09□□□□□ -1.27
DDX55-208ENST00000541259 IGHV7-4-1A0A0J9YVY3 117 aa7.08□□□□□ -1.28
DDX55-208ENST00000541259 A8MWP6 167 aa7.08□□□□□ -1.28
DDX55-208ENST00000541259 H3BRN7 92 aa7.08□□□□□ -1.28
DDX55-208ENST00000541259 M0QZ24 198 aa7.08□□□□□ -1.28
DDX55-208ENST00000541259 FOLR2P14207 255 aa7.08□□□□□ -1.28
DDX55-208ENST00000541259 M6PRP20645 277 aa7.08□□□□□ -1.28
DDX55-208ENST00000541259 CBLN1P23435 193 aa7.08□□□□□ -1.28
DDX55-208ENST00000541259 IFITM2Q01629 132 aa7.08□□□□□ -1.28
DDX55-208ENST00000541259 ZNF726P1Q15940 193 aa7.08□□□□□ -1.28
DDX55-208ENST00000541259 TMEM41BQ5BJD5 291 aa7.08□□□□□ -1.28
DDX55-208ENST00000541259 AKR1C8PQ5T2L2 129 aa7.08□□□□□ -1.28
DDX55-208ENST00000541259 PXDC1Q5TGL8 231 aa7.08□□□□□ -1.28
DDX55-208ENST00000541259 FAM78BQ5VT40 261 aa7.08□□□□□ -1.28
DDX55-208ENST00000541259 FAM122CQ6P4D5 195 aa7.08□□□□□ -1.28
DDX55-208ENST00000541259 MIR17HGQ75NE6 70 aa7.08□□□□□ -1.28
DDX55-208ENST00000541259 RPP25LQ8N5L8 163 aaKnown RBP7.08□□□□□ -1.28
DDX55-208ENST00000541259 OR1L4Q8NGR5 311 aa7.08□□□□□ -1.28
DDX55-208ENST00000541259 GATAD1Q8WUU5 269 aa7.08□□□□□ -1.28
DDX55-208ENST00000541259 METTL26Q96S19 204 aa7.08□□□□□ -1.28
DDX55-208ENST00000541259 SLC25A39Q9BZJ4 359 aaPredicted RBP7.08□□□□□ -1.28
DDX55-208ENST00000541259 SMPXQ9UHP9 88 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms