RNA–Protein interactions for RNA: ENST00000540669.1

VPS33A-204, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS33A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-204ENST00000540669 PHYHIPLQ96FC7 376 aa8.02□□□□□ -1.13
VPS33A-204ENST00000540669 DUX3Q96PT4 197 aa8.02□□□□□ -1.13
VPS33A-204ENST00000540669 ZNF471Q9BX82 626 aaPredicted RBP8.02□□□□□ -1.13
VPS33A-204ENST00000540669 VSIRQ9H7M9 311 aa8.02□□□□□ -1.13
VPS33A-204ENST00000540669 DAZ1Q9NQZ3 744 aaKnown RBP8.02□□□□□ -1.13
VPS33A-204ENST00000540669 NOTCH3Q9UM47 2321 aa8.01□□□□□ -1.13
VPS33A-204ENST00000540669 A0A1W2PRX2 142 aa8.01□□□□□ -1.13
VPS33A-204ENST00000540669 MRPS12O15235 138 aaKnown RBP8.01□□□□□ -1.13
VPS33A-204ENST00000540669 IL4P05112 153 aa8.01□□□□□ -1.13
VPS33A-204ENST00000540669 C4BPBP20851 252 aa8.01□□□□□ -1.13
VPS33A-204ENST00000540669 EIF5AP63241 154 aaKnown RBP8.01□□□□□ -1.13
VPS33A-204ENST00000540669 RAB31Q13636 194 aa8.01□□□□□ -1.13
VPS33A-204ENST00000540669 RPEL1Q2QD12 228 aa8.01□□□□□ -1.13
VPS33A-204ENST00000540669 GCSAMLQ5JQS6 135 aa8.01□□□□□ -1.13
VPS33A-204ENST00000540669 Q8WTZ3 238 aa8.01□□□□□ -1.13
VPS33A-204ENST00000540669 GPR61Q9BZJ8 451 aa8.01□□□□□ -1.13
VPS33A-204ENST00000540669 NOTCH1P46531 2555 aa8.01□□□□□ -1.13
VPS33A-204ENST00000540669 IGHV3-35A0A0C4DH35 117 aa8□□□□□ -1.13
VPS33A-204ENST00000540669 C2orf70A6NJV1 201 aa8□□□□□ -1.13
VPS33A-204ENST00000540669 C17orf112F2Z3M2 114 aa8□□□□□ -1.13
VPS33A-204ENST00000540669 BUB3O43684 328 aa8□□□□□ -1.13
VPS33A-204ENST00000540669 EDN2P20800 178 aa8□□□□□ -1.13
VPS33A-204ENST00000540669 SYNJ2BPP57105 145 aa8□□□□□ -1.13
VPS33A-204ENST00000540669 ZNF726P1Q15940 193 aa8□□□□□ -1.13
VPS33A-204ENST00000540669 MORN5Q5VZ52 161 aa8□□□□□ -1.13
VPS33A-204ENST00000540669 RPP25LQ8N5L8 163 aaKnown RBP8□□□□□ -1.13
VPS33A-204ENST00000540669 OR9G4Q8NGQ1 327 aa8□□□□□ -1.13
VPS33A-204ENST00000540669 SCGB1C1Q8TD33 95 aa8□□□□□ -1.13
VPS33A-204ENST00000540669 GATAD1Q8WUU5 269 aa8□□□□□ -1.13
VPS33A-204ENST00000540669 DPF1Q92782 380 aa8□□□□□ -1.13
VPS33A-204ENST00000540669 MARC2Q969Z3 335 aa8□□□□□ -1.13
VPS33A-204ENST00000540669 FAM167A-AS1Q96KT0 104 aa8□□□□□ -1.13
VPS33A-204ENST00000540669 C17orf77Q96MU5 243 aa8□□□□□ -1.13
VPS33A-204ENST00000540669 SHANK2-AS3Q9BTD1 123 aa8□□□□□ -1.13
VPS33A-204ENST00000540669 SLC25A32Q9H2D1 315 aa8□□□□□ -1.13
VPS33A-204ENST00000540669 ELOA3CA0A087WX78 387 aaPredicted RBP7.99□□□□□ -1.13
VPS33A-204ENST00000540669 IGHV7-4-1A0A0J9YVY3 117 aa7.99□□□□□ -1.13
VPS33A-204ENST00000540669 UMAD1C9J7I0 102 aa7.99□□□□□ -1.13
VPS33A-204ENST00000540669 CSN3P07498 182 aa7.99□□□□□ -1.13
VPS33A-204ENST00000540669 CD33P20138 364 aa7.99□□□□□ -1.13
VPS33A-204ENST00000540669 M6PRP20645 277 aa7.99□□□□□ -1.13
VPS33A-204ENST00000540669 RAB2AP61019 212 aa7.99□□□□□ -1.13
VPS33A-204ENST00000540669 FAM106AQ4KMX7 169 aa7.99□□□□□ -1.13
VPS33A-204ENST00000540669 FAM90A2PQ658T7 463 aa7.99□□□□□ -1.13
VPS33A-204ENST00000540669 SSX7Q7RTT5 188 aa7.99□□□□□ -1.13
VPS33A-204ENST00000540669 TMED6Q8WW62 240 aa7.99□□□□□ -1.13
VPS33A-204ENST00000540669 GLMPQ8WWB7 406 aa7.99□□□□□ -1.13
VPS33A-204ENST00000540669 PFDN5Q99471 154 aa7.99□□□□□ -1.13
VPS33A-204ENST00000540669 MRPL32Q9BYC8 188 aaKnown RBP7.99□□□□□ -1.13
VPS33A-204ENST00000540669 RPRMQ9NS64 109 aa7.99□□□□□ -1.13
VPS33A-204ENST00000540669 UFC1Q9Y3C8 167 aa7.99□□□□□ -1.13
VPS33A-204ENST00000540669 OVOL1O14753 267 aa7.98□□□□□ -1.13
VPS33A-204ENST00000540669 HYPMO75409 117 aa7.98□□□□□ -1.13
VPS33A-204ENST00000540669 APOHP02749 345 aaPredicted RBP7.98□□□□□ -1.13
VPS33A-204ENST00000540669 GP9P14770 177 aa7.98□□□□□ -1.13
VPS33A-204ENST00000540669 SULT1A2P50226 295 aa7.98□□□□□ -1.13
VPS33A-204ENST00000540669 LYZP61626 148 aa7.98□□□□□ -1.13
VPS33A-204ENST00000540669 IFITM2Q01629 132 aa7.98□□□□□ -1.13
VPS33A-204ENST00000540669 TM4SF20Q53R12 229 aa7.98□□□□□ -1.13
VPS33A-204ENST00000540669 TMEM41BQ5BJD5 291 aa7.98□□□□□ -1.13
VPS33A-204ENST00000540669 FFAR4Q5NUL3 377 aa7.98□□□□□ -1.13
VPS33A-204ENST00000540669 C1orf194Q5T5A4 169 aa7.98□□□□□ -1.13
VPS33A-204ENST00000540669 C16orf54Q6UWD8 224 aa7.98□□□□□ -1.13
VPS33A-204ENST00000540669 ZNF709Q8N972 641 aa7.98□□□□□ -1.13
VPS33A-204ENST00000540669 ZNF503Q96F45 646 aa7.98□□□□□ -1.13
VPS33A-204ENST00000540669 UHRF2Q96PU4 802 aa7.98□□□□□ -1.13
VPS33A-204ENST00000540669 SCRT1Q9BWW7 348 aa7.98□□□□□ -1.13
VPS33A-204ENST00000540669 SLC25A39Q9BZJ4 359 aaPredicted RBP7.98□□□□□ -1.13
VPS33A-204ENST00000540669 SEPSECSQ9HD40 501 aaKnown RBP7.98□□□□□ -1.13
VPS33A-204ENST00000540669 SMPXQ9UHP9 88 aa7.98□□□□□ -1.13
VPS33A-204ENST00000540669 IGHV3OR16-8A0A075B7F1 116 aa7.97□□□□□ -1.13
VPS33A-204ENST00000540669 ZNF98A6NK75 572 aa7.97□□□□□ -1.13
VPS33A-204ENST00000540669 CHEK1O14757 476 aa7.97□□□□□ -1.13
VPS33A-204ENST00000540669 IGLV1-51P01701 117 aa7.97□□□□□ -1.13
VPS33A-204ENST00000540669 MBP02144 154 aa7.97□□□□□ -1.13
VPS33A-204ENST00000540669 CBLN1P23435 193 aa7.97□□□□□ -1.13
VPS33A-204ENST00000540669 SPATA31B1PQ5VZV4 182 aa7.97□□□□□ -1.13
VPS33A-204ENST00000540669 TEX261Q6UWH6 196 aa7.97□□□□□ -1.13
VPS33A-204ENST00000540669 DPPA3Q6W0C5 159 aa7.97□□□□□ -1.13
VPS33A-204ENST00000540669 Q6ZRG5 221 aa7.97□□□□□ -1.13
VPS33A-204ENST00000540669 OR1L4Q8NGR5 311 aa7.97□□□□□ -1.13
VPS33A-204ENST00000540669 SUN5Q8TC36 379 aa7.97□□□□□ -1.13
VPS33A-204ENST00000540669 METTL26Q96S19 204 aa7.97□□□□□ -1.13
VPS33A-204ENST00000540669 RNF2Q99496 336 aa7.97□□□□□ -1.13
VPS33A-204ENST00000540669 MCRIP2Q9BUT9 160 aaKnown RBP7.97□□□□□ -1.13
VPS33A-204ENST00000540669 DNAJC4Q9NNZ3 241 aa7.97□□□□□ -1.13
VPS33A-204ENST00000540669 TMEM14CQ9P0S9 112 aa7.97□□□□□ -1.13
VPS33A-204ENST00000540669 ZMAT5Q9UDW3 170 aaKnown RBP7.97□□□□□ -1.13
VPS33A-204ENST00000540669 MLXQ9UH92 298 aa7.97□□□□□ -1.13
VPS33A-204ENST00000540669 RABAC1Q9UI14 185 aa7.97□□□□□ -1.13
VPS33A-204ENST00000540669 FUT9Q9Y231 359 aa7.97□□□□□ -1.13
VPS33A-204ENST00000540669 HIGD1AQ9Y241 93 aa7.97□□□□□ -1.13
VPS33A-204ENST00000540669 A0A087X0K7 114 aa7.96□□□□□ -1.14
VPS33A-204ENST00000540669 TRAV1-1A0A0B4J248 108 aa7.96□□□□□ -1.14
VPS33A-204ENST00000540669 COX7A2P2O60397 106 aa7.96□□□□□ -1.14
VPS33A-204ENST00000540669 STAG3L2P0CL84 134 aa7.96□□□□□ -1.14
VPS33A-204ENST00000540669 STAG3L3P0CL85 134 aa7.96□□□□□ -1.14
VPS33A-204ENST00000540669 IGLC2P0DOY2 106 aa7.96□□□□□ -1.14
VPS33A-204ENST00000540669 FOLR2P14207 255 aa7.96□□□□□ -1.14
VPS33A-204ENST00000540669 RAB5CP51148 216 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms