RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 C16orf97H3BN30 126 aa9.83□□□□□ -0.84
NPC1-202ENST00000540608 CRXO43186 299 aaPredicted RBP9.83□□□□□ -0.84
NPC1-202ENST00000540608 TCF21O43680 179 aa9.83□□□□□ -0.84
NPC1-202ENST00000540608 FAM87AP0C7U9 286 aa9.83□□□□□ -0.84
NPC1-202ENST00000540608 LOXP28300 417 aaPredicted RBP9.83□□□□□ -0.84
NPC1-202ENST00000540608 HINT1P49773 126 aaPredicted RBP9.83□□□□□ -0.84
NPC1-202ENST00000540608 FAM120AOSQ5T036 256 aa9.83□□□□□ -0.84
NPC1-202ENST00000540608 SPATA12Q7Z6I5 190 aa9.83□□□□□ -0.84
NPC1-202ENST00000540608 DAZAP1Q96EP5 407 aaKnown RBP9.83□□□□□ -0.84
NPC1-202ENST00000540608 PGLYRP4Q96LB8 373 aa9.83□□□□□ -0.84
NPC1-202ENST00000540608 Q9H3A6 140 aa9.83□□□□□ -0.84
NPC1-202ENST00000540608 C1RLQ9NZP8 487 aa9.83□□□□□ -0.84
NPC1-202ENST00000540608 Q9UFV3 132 aa9.83□□□□□ -0.84
NPC1-202ENST00000540608 ARFGEF3Q5TH69 2177 aa9.83□□□□□ -0.84
NPC1-202ENST00000540608 RPL27AP46776 148 aaKnown RBP9.82□□□□□ -0.84
NPC1-202ENST00000540608 TMEM155Q4W5P6 130 aa9.82□□□□□ -0.84
NPC1-202ENST00000540608 RBPMS2Q6ZRY4 209 aaKnown RBP9.82□□□□□ -0.84
NPC1-202ENST00000540608 OR4F17Q8NGA8 305 aa9.82□□□□□ -0.84
NPC1-202ENST00000540608 CLEC5AQ9NY25 188 aa9.82□□□□□ -0.84
NPC1-202ENST00000540608 CTSZQ9UBR2 303 aa9.82□□□□□ -0.84
NPC1-202ENST00000540608 CUL9Q8IWT3 2517 aa9.82□□□□□ -0.84
NPC1-202ENST00000540608 ROS1P08922 2347 aa9.82□□□□□ -0.84
NPC1-202ENST00000540608 ZFHX2Q9C0A1 2572 aaPredicted RBP9.82□□□□□ -0.84
NPC1-202ENST00000540608 FAM231BA6NCW3 169 aa9.82□□□□□ -0.84
NPC1-202ENST00000540608 CRYGBP07316 175 aa9.82□□□□□ -0.84
NPC1-202ENST00000540608 IGHV1-8P0DP01 117 aa9.82□□□□□ -0.84
NPC1-202ENST00000540608 PAX2Q02962 417 aa9.82□□□□□ -0.84
NPC1-202ENST00000540608 CBY1Q9Y3M2 126 aa9.82□□□□□ -0.84
NPC1-202ENST00000540608 RIF1Q5UIP0 2472 aaKnown RBP9.82□□□□□ -0.84
NPC1-202ENST00000540608 NAV3Q8IVL0 2385 aa9.81□□□□□ -0.84
NPC1-202ENST00000540608 BSPH1Q075Z2 132 aa9.81□□□□□ -0.84
NPC1-202ENST00000540608 MUC15Q8N387 334 aa9.81□□□□□ -0.84
NPC1-202ENST00000540608 NDFIP1Q9BT67 221 aa9.81□□□□□ -0.84
NPC1-202ENST00000540608 KAAG1Q9UBP8 84 aa9.81□□□□□ -0.84
NPC1-202ENST00000540608 ZNF835Q9Y2P0 537 aa9.81□□□□□ -0.84
NPC1-202ENST00000540608 IGHV3-72A0A0B4J1Y9 119 aa9.81□□□□□ -0.84
NPC1-202ENST00000540608 NPIPB6E9PJ23 425 aa9.81□□□□□ -0.84
NPC1-202ENST00000540608 FOXA3P55318 350 aaPredicted RBP9.81□□□□□ -0.84
NPC1-202ENST00000540608 PRR31Q5SQ13 230 aa9.81□□□□□ -0.84
NPC1-202ENST00000540608 IGHV1-24A0A0C4DH33 117 aa9.8□□□□□ -0.84
NPC1-202ENST00000540608 H3BTX0 84 aa9.8□□□□□ -0.84
NPC1-202ENST00000540608 THBDP07204 575 aa9.8□□□□□ -0.84
NPC1-202ENST00000540608 LEMD1Q68G75 181 aa9.8□□□□□ -0.84
NPC1-202ENST00000540608 TMEM133Q9H2Q1 129 aa9.8□□□□□ -0.84
NPC1-202ENST00000540608 OTORQ9NRC9 128 aa9.8□□□□□ -0.84
NPC1-202ENST00000540608 SH3BGRL2Q9UJC5 107 aa9.8□□□□□ -0.84
NPC1-202ENST00000540608 IGHV3-21A0A0B4J1V1 117 aa9.8□□□□□ -0.84
NPC1-202ENST00000540608 SH2D7A6NKC9 451 aaPredicted RBP9.8□□□□□ -0.84
NPC1-202ENST00000540608 SYS1-DBNDD2H3BUS1 97 aa9.8□□□□□ -0.84
NPC1-202ENST00000540608 CD24P25063 80 aa9.8□□□□□ -0.84
NPC1-202ENST00000540608 HIGD1AQ9Y241 93 aa9.8□□□□□ -0.84
NPC1-202ENST00000540608 COX11Q9Y6N1 276 aa9.8□□□□□ -0.84
NPC1-202ENST00000540608 PIEZO2Q9H5I5 2752 aa9.8□□□□□ -0.84
NPC1-202ENST00000540608 LOC102724200A0A096LPH7 203 aaPredicted RBP9.8□□□□□ -0.84
NPC1-202ENST00000540608 IGHV1-69-2A0A0G2JMI3 117 aa9.8□□□□□ -0.84
NPC1-202ENST00000540608 OR4C46A6NHA9 309 aa9.8□□□□□ -0.84
NPC1-202ENST00000540608 M0QZ24 198 aa9.8□□□□□ -0.84
NPC1-202ENST00000540608 APELAP0DMC3 54 aa9.8□□□□□ -0.84
NPC1-202ENST00000540608 ZNF738Q8NE65 137 aa9.8□□□□□ -0.84
NPC1-202ENST00000540608 ST20Q9HBF5 79 aa9.8□□□□□ -0.84
NPC1-202ENST00000540608 TMEM14CQ9P0S9 112 aa9.8□□□□□ -0.84
NPC1-202ENST00000540608 SIGLEC9Q9Y336 463 aa9.8□□□□□ -0.84
NPC1-202ENST00000540608 VSTM5A8MXK1 200 aa9.79□□□□□ -0.84
NPC1-202ENST00000540608 HAX1O00165 279 aa9.79□□□□□ -0.84
NPC1-202ENST00000540608 CCL25O15444 150 aa9.79□□□□□ -0.84
NPC1-202ENST00000540608 LEPROTL1O95214 131 aa9.79□□□□□ -0.84
NPC1-202ENST00000540608 CNTFRP26992 372 aa9.79□□□□□ -0.84
NPC1-202ENST00000540608 PTTG1IPP53801 180 aa9.79□□□□□ -0.84
NPC1-202ENST00000540608 NHLH1Q02575 133 aa9.79□□□□□ -0.84
NPC1-202ENST00000540608 UNQ5815/PRO19632Q6UWF5 114 aa9.79□□□□□ -0.84
NPC1-202ENST00000540608 TNFRSF14Q92956 283 aa9.79□□□□□ -0.84
NPC1-202ENST00000540608 GSX1Q9H4S2 264 aaPredicted RBP9.79□□□□□ -0.84
NPC1-202ENST00000540608 F11RQ9Y624 299 aaKnown RBP9.79□□□□□ -0.84
NPC1-202ENST00000540608 CHEK1O14757 476 aa9.79□□□□□ -0.84
NPC1-202ENST00000540608 OR5AL1P0C617 328 aa9.79□□□□□ -0.84
NPC1-202ENST00000540608 PSG1P11464 419 aa9.79□□□□□ -0.84
NPC1-202ENST00000540608 Q86TA4 180 aa9.79□□□□□ -0.84
NPC1-202ENST00000540608 ZGRF1Q86YA3 2104 aa9.79□□□□□ -0.84
NPC1-202ENST00000540608 RNASE6Q93091 150 aaKnown RBP9.79□□□□□ -0.84
NPC1-202ENST00000540608 ABHD17AQ96GS6 310 aa9.79□□□□□ -0.84
NPC1-202ENST00000540608 PRRG2O14669 202 aa9.78□□□□□ -0.84
NPC1-202ENST00000540608 IGLV2-11P01706 119 aa9.78□□□□□ -0.84
NPC1-202ENST00000540608 COL8A1P27658 744 aa9.78□□□□□ -0.84
NPC1-202ENST00000540608 UBE2V1Q13404 147 aa9.78□□□□□ -0.84
NPC1-202ENST00000540608 C16orf54Q6UWD8 224 aa9.78□□□□□ -0.84
NPC1-202ENST00000540608 LINC00173Q6ZV60 143 aa9.78□□□□□ -0.84
NPC1-202ENST00000540608 CIARTQ8N365 385 aaPredicted RBP9.78□□□□□ -0.84
NPC1-202ENST00000540608 GVINP1Q7Z2Y8 2422 aa9.78□□□□□ -0.84
NPC1-202ENST00000540608 PCNX1Q96RV3 2341 aa9.78□□□□□ -0.84
NPC1-202ENST00000540608 PLXNB1O43157 2135 aa9.78□□□□□ -0.84
NPC1-202ENST00000540608 TRBV6-1A0A0K0K1D8 114 aa9.78□□□□□ -0.84
NPC1-202ENST00000540608 TEX22C9J3V5 150 aa9.78□□□□□ -0.84
NPC1-202ENST00000540608 APOHP02749 345 aaPredicted RBP9.78□□□□□ -0.84
NPC1-202ENST00000540608 IGLC1P0CG04 106 aa9.78□□□□□ -0.84
NPC1-202ENST00000540608 HOXB4P17483 251 aaPredicted RBP9.78□□□□□ -0.84
NPC1-202ENST00000540608 PPP1R27Q86WC6 154 aa9.78□□□□□ -0.84
NPC1-202ENST00000540608 SLC25A39Q9BZJ4 359 aaPredicted RBP9.78□□□□□ -0.84
NPC1-202ENST00000540608 TRAV8-1A0A0A6YYK1 113 aa9.77□□□□□ -0.84
NPC1-202ENST00000540608 LIPFP07098 398 aa9.77□□□□□ -0.84
NPC1-202ENST00000540608 LYZP61626 148 aa9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms