RNA–Protein interactions for RNA: ENST00000540021.5

MSH6-210, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 3,930 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-210ENST00000540021 J3KRW8 73 aa10.51□□□□□ -0.73
MSH6-210ENST00000540021 MEGF9Q9H1U4 602 aa10.51□□□□□ -0.73
MSH6-210ENST00000540021 IL4P05112 153 aa10.51□□□□□ -0.73
MSH6-210ENST00000540021 TMPRSS3P57727 454 aa10.51□□□□□ -0.73
MSH6-210ENST00000540021 DMDP11532 3685 aa10.5□□□□□ -0.73
MSH6-210ENST00000540021 TMEM189A5PLL7 270 aa10.5□□□□□ -0.73
MSH6-210ENST00000540021 M0R296 226 aa10.5□□□□□ -0.73
MSH6-210ENST00000540021 ZNF71Q9NQZ8 489 aaPredicted RBP10.5□□□□□ -0.73
MSH6-210ENST00000540021 BDP1A6H8Y1 2624 aa10.5□□□□□ -0.73
MSH6-210ENST00000540021 IGHV2-26A0A0B4J1V2 119 aa10.5□□□□□ -0.73
MSH6-210ENST00000540021 MBNL2Q5VZF2 373 aaKnown RBP10.5□□□□□ -0.73
MSH6-210ENST00000540021 RPRMLQ8N4K4 120 aa10.5□□□□□ -0.73
MSH6-210ENST00000540021 C1orf162Q8NEQ5 155 aaPredicted RBP10.5□□□□□ -0.73
MSH6-210ENST00000540021 UFC1Q9Y3C8 167 aa10.5□□□□□ -0.73
MSH6-210ENST00000540021 WDFY4Q6ZS81 3184 aa10.5□□□□□ -0.73
MSH6-210ENST00000540021 COL5A1P20908 1838 aaPredicted RBP10.5□□□□□ -0.73
MSH6-210ENST00000540021 IGHV1-24A0A0C4DH33 117 aa10.5□□□□□ -0.73
MSH6-210ENST00000540021 IGHV3-23P01764 117 aa10.5□□□□□ -0.73
MSH6-210ENST00000540021 CACNG7P62955 275 aa10.5□□□□□ -0.73
MSH6-210ENST00000540021 WT1-ASQ06250 92 aa10.5□□□□□ -0.73
MSH6-210ENST00000540021 ZNF503Q96F45 646 aa10.5□□□□□ -0.73
MSH6-210ENST00000540021 TPSG1Q9NRR2 321 aa10.5□□□□□ -0.73
MSH6-210ENST00000540021 CGB1A6NKQ9 187 aa10.49□□□□□ -0.73
MSH6-210ENST00000540021 ZNF785A8K8V0 405 aa10.49□□□□□ -0.73
MSH6-210ENST00000540021 NDUFB8O95169 186 aa10.49□□□□□ -0.73
MSH6-210ENST00000540021 PAX1P15863 534 aa10.49□□□□□ -0.73
MSH6-210ENST00000540021 PLP1P60201 277 aa10.49□□□□□ -0.73
MSH6-210ENST00000540021 TIMM23BQ5SRD1 257 aa10.49□□□□□ -0.73
MSH6-210ENST00000540021 SCNM1Q9BWG6 230 aa10.49□□□□□ -0.73
MSH6-210ENST00000540021 TCRAP04437 139 aa10.49□□□□□ -0.73
MSH6-210ENST00000540021 TEX45Q8NA69 505 aa10.49□□□□□ -0.73
MSH6-210ENST00000540021 FMC1Q96HJ9 113 aa10.49□□□□□ -0.73
MSH6-210ENST00000540021 GAFA1Q96PS6 74 aa10.49□□□□□ -0.73
MSH6-210ENST00000540021 NOTCH3Q9UM47 2321 aa10.49□□□□□ -0.73
MSH6-210ENST00000540021 GAGE12BA1L429 117 aa10.49□□□□□ -0.73
MSH6-210ENST00000540021 ATP5IP56385 69 aaPredicted RBP10.49□□□□□ -0.73
MSH6-210ENST00000540021 S100A7AQ86SG5 101 aa10.49□□□□□ -0.73
MSH6-210ENST00000540021 CST9LQ9H4G1 147 aa10.49□□□□□ -0.73
MSH6-210ENST00000540021 LINC00312Q9Y6C7 94 aa10.49□□□□□ -0.73
MSH6-210ENST00000540021 IGHV3OR16-13A0A075B7E8 117 aa10.48□□□□□ -0.73
MSH6-210ENST00000540021 TRAV30A0A087WSZ9 112 aa10.48□□□□□ -0.73
MSH6-210ENST00000540021 IGHV3-74A0A0B4J1X5 117 aa10.48□□□□□ -0.73
MSH6-210ENST00000540021 MC5RP33032 325 aa10.48□□□□□ -0.73
MSH6-210ENST00000540021 TMEM186Q96B77 213 aa10.48□□□□□ -0.73
MSH6-210ENST00000540021 SLC25A15Q9Y619 301 aa10.48□□□□□ -0.73
MSH6-210ENST00000540021 A1L4Q6 167 aa10.48□□□□□ -0.73
MSH6-210ENST00000540021 H0YJW9 148 aa10.48□□□□□ -0.73
MSH6-210ENST00000540021 ARMS2P0C7Q2 107 aa10.48□□□□□ -0.73
MSH6-210ENST00000540021 ESDP10768 282 aa10.48□□□□□ -0.73
MSH6-210ENST00000540021 PRELID3AQ96N28 172 aa10.48□□□□□ -0.73
MSH6-210ENST00000540021 NDFIP1Q9BT67 221 aa10.48□□□□□ -0.73
MSH6-210ENST00000540021 M0R3E3 92 aa10.48□□□□□ -0.73
MSH6-210ENST00000540021 KLK10O43240 276 aa10.48□□□□□ -0.73
MSH6-210ENST00000540021 SCGB2A1O75556 95 aa10.48□□□□□ -0.73
MSH6-210ENST00000540021 CD40P25942 277 aa10.48□□□□□ -0.73
MSH6-210ENST00000540021 PSG9Q00887 426 aa10.48□□□□□ -0.73
MSH6-210ENST00000540021 EIF4EBP1Q13541 118 aaPredicted RBP10.48□□□□□ -0.73
MSH6-210ENST00000540021 GUSBP1Q15486 140 aa10.48□□□□□ -0.73
MSH6-210ENST00000540021 SLC25A48Q6ZT89 311 aaKnown RBP10.48□□□□□ -0.73
MSH6-210ENST00000540021 ZNF414Q96IQ9 312 aa10.48□□□□□ -0.73
MSH6-210ENST00000540021 ATP5L2Q7Z4Y8 100 aa10.47□□□□□ -0.73
MSH6-210ENST00000540021 A0A1W2PPI3 338 aa10.47□□□□□ -0.73
MSH6-210ENST00000540021 IGLC7A0M8Q6 106 aa10.47□□□□□ -0.73
MSH6-210ENST00000540021 E7EUB6 86 aa10.47□□□□□ -0.73
MSH6-210ENST00000540021 C16orf97H3BN30 126 aa10.47□□□□□ -0.73
MSH6-210ENST00000540021 NCR2O95944 276 aa10.47□□□□□ -0.73
MSH6-210ENST00000540021 HIST1H1AQ02539 215 aaPredicted RBP10.47□□□□□ -0.73
MSH6-210ENST00000540021 TMEM97Q5BJF2 176 aa10.47□□□□□ -0.73
MSH6-210ENST00000540021 FREM2Q5SZK8 3169 aa10.47□□□□□ -0.73
MSH6-210ENST00000540021 TMEM265A0A087WTH1 108 aa10.47□□□□□ -0.73
MSH6-210ENST00000540021 LYNX1G3V0Z9 82 aa10.47□□□□□ -0.73
MSH6-210ENST00000540021 TM4SF5O14894 197 aa10.47□□□□□ -0.73
MSH6-210ENST00000540021 LYNX1P0DP58 116 aa10.47□□□□□ -0.73
MSH6-210ENST00000540021 GDF5OSQ5U4N7 250 aa10.47□□□□□ -0.73
MSH6-210ENST00000540021 TMEM200BQ69YZ2 307 aa10.47□□□□□ -0.73
MSH6-210ENST00000540021 CHCHD1Q96BP2 118 aaKnown RBP10.47□□□□□ -0.73
MSH6-210ENST00000540021 NGBQ9NPG2 151 aa10.47□□□□□ -0.73
MSH6-210ENST00000540021 MSMPQ1L6U9 139 aa10.46□□□□□ -0.73
MSH6-210ENST00000540021 OCIAD2Q56VL3 154 aa10.46□□□□□ -0.73
MSH6-210ENST00000540021 PET117Q6UWS5 81 aa10.46□□□□□ -0.73
MSH6-210ENST00000540021 PPIFP30405 207 aaKnown RBP10.46□□□□□ -0.73
MSH6-210ENST00000540021 KLF17Q5JT82 389 aaPredicted RBP10.46□□□□□ -0.73
MSH6-210ENST00000540021 RASL11AQ6T310 242 aa10.46□□□□□ -0.73
MSH6-210ENST00000540021 PLSCR4Q9NRQ2 329 aa10.46□□□□□ -0.73
MSH6-210ENST00000540021 COLQQ9Y215 455 aaPredicted RBP10.46□□□□□ -0.73
MSH6-210ENST00000540021 DSPP15924 2871 aaKnown RBP10.46□□□□□ -0.74
MSH6-210ENST00000540021 PRSS46E5RG02 174 aa10.46□□□□□ -0.74
MSH6-210ENST00000540021 SMKR1H3BMG3 65 aa10.46□□□□□ -0.74
MSH6-210ENST00000540021 FABP2P12104 132 aa10.46□□□□□ -0.74
MSH6-210ENST00000540021 RPL11P62913 178 aaKnown RBP10.46□□□□□ -0.74
MSH6-210ENST00000540021 FXYD5Q96DB9 178 aa10.46□□□□□ -0.74
MSH6-210ENST00000540021 NDUFA4L2Q9NRX3 87 aa10.46□□□□□ -0.74
MSH6-210ENST00000540021 A0A1W2PNU3 283 aaPredicted RBP10.45□□□□□ -0.74
MSH6-210ENST00000540021 D6R8Y8 96 aa10.45□□□□□ -0.74
MSH6-210ENST00000540021 IGLV2-8P01709 118 aa10.45□□□□□ -0.74
MSH6-210ENST00000540021 CNTFRP26992 372 aa10.45□□□□□ -0.74
MSH6-210ENST00000540021 IGF2BP2-AS1Q96M15 143 aa10.45□□□□□ -0.74
MSH6-210ENST00000540021 SPCS1Q9Y6A9 102 aa10.45□□□□□ -0.74
MSH6-210ENST00000540021 CFHR2P36980 270 aa10.45□□□□□ -0.74
MSH6-210ENST00000540021 IFI27P40305 119 aaPredicted RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms