RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 A0A1W2PS18 150 aa5.18□□□□□ -1.58
YBX3-206ENST00000536823 FAM90A26D6RGX4 464 aa5.18□□□□□ -1.58
YBX3-206ENST00000536823 UBE2CO00762 179 aa5.18□□□□□ -1.58
YBX3-206ENST00000536823 PITX3O75364 302 aa5.18□□□□□ -1.58
YBX3-206ENST00000536823 DFFBO76075 338 aa5.18□□□□□ -1.58
YBX3-206ENST00000536823 SFT2D2O95562 160 aa5.18□□□□□ -1.58
YBX3-206ENST00000536823 NPSP0C0P6 89 aa5.18□□□□□ -1.58
YBX3-206ENST00000536823 SLC25A6P12236 298 aa5.18□□□□□ -1.58
YBX3-206ENST00000536823 NPPCP23582 126 aa5.18□□□□□ -1.58
YBX3-206ENST00000536823 P2RY1P47900 373 aa5.18□□□□□ -1.58
YBX3-206ENST00000536823 CMC4P56277 68 aaPredicted RBP5.18□□□□□ -1.58
YBX3-206ENST00000536823 ATP5IP56385 69 aaPredicted RBP5.18□□□□□ -1.58
YBX3-206ENST00000536823 UBE2MP61081 183 aaKnown RBP5.18□□□□□ -1.58
YBX3-206ENST00000536823 YPEL3P61236 119 aaPredicted RBP5.18□□□□□ -1.58
YBX3-206ENST00000536823 PAFAH1B2P68402 229 aa5.18□□□□□ -1.58
YBX3-206ENST00000536823 PPP1R1AQ13522 171 aa5.18□□□□□ -1.58
YBX3-206ENST00000536823 RBMS2Q15434 407 aaKnown RBP5.18□□□□□ -1.58
YBX3-206ENST00000536823 ETFRF1Q6IPR1 90 aa5.18□□□□□ -1.58
YBX3-206ENST00000536823 APRG1Q8IVJ8 170 aa5.18□□□□□ -1.58
YBX3-206ENST00000536823 CENPSQ8N2Z9 138 aa5.18□□□□□ -1.58
YBX3-206ENST00000536823 GBGT1Q8N5D6 347 aa5.18□□□□□ -1.58
YBX3-206ENST00000536823 NPIPB3Q92617 1050 aa5.18□□□□□ -1.58
YBX3-206ENST00000536823 ACY3Q96HD9 319 aa5.18□□□□□ -1.58
YBX3-206ENST00000536823 NARS2Q96I59 477 aaKnown RBP5.18□□□□□ -1.58
YBX3-206ENST00000536823 MS4A6AQ9H2W1 248 aa5.18□□□□□ -1.58
YBX3-206ENST00000536823 MAP6D1Q9H9H5 199 aa5.18□□□□□ -1.58
YBX3-206ENST00000536823 PLECQ15149 4684 aaKnown RBP5.18□□□□□ -1.58
YBX3-206ENST00000536823 NAP1L6A6NFF2 107 aa5.17□□□□□ -1.58
YBX3-206ENST00000536823 DNASE2O00115 360 aaPredicted RBP5.17□□□□□ -1.58
YBX3-206ENST00000536823 TOMM40O96008 361 aa5.17□□□□□ -1.58
YBX3-206ENST00000536823 IFNA4P05014 189 aa5.17□□□□□ -1.58
YBX3-206ENST00000536823 HNRNPCP07910 306 aaKnown RBP eCLIP5.17□□□□□ -1.584e-7■□□□□ 9.3
YBX3-206ENST00000536823 RPL35AP18077 110 aaKnown RBP5.17□□□□□ -1.58
YBX3-206ENST00000536823 INPP1P49441 399 aa5.17□□□□□ -1.58
YBX3-206ENST00000536823 BAK1Q16611 211 aa5.17□□□□□ -1.58
YBX3-206ENST00000536823 DEFB135Q30KP9 77 aa5.17□□□□□ -1.58
YBX3-206ENST00000536823 Q8WTZ3 238 aa5.17□□□□□ -1.58
YBX3-206ENST00000536823 SDHCQ99643 169 aaPredicted RBP5.17□□□□□ -1.58
YBX3-206ENST00000536823 MGAT4CQ9UBM8 478 aa5.17□□□□□ -1.58
YBX3-206ENST00000536823 RABAC1Q9UI14 185 aa5.17□□□□□ -1.58
YBX3-206ENST00000536823 TMED3Q9Y3Q3 217 aa5.17□□□□□ -1.58
YBX3-206ENST00000536823 LCE6AA0A183 80 aa5.16□□□□□ -1.58
YBX3-206ENST00000536823 K7EQG2 157 aa5.16□□□□□ -1.58
YBX3-206ENST00000536823 MED6O75586 246 aa5.16□□□□□ -1.58
YBX3-206ENST00000536823 NDUFB6O95139 128 aa5.16□□□□□ -1.58
YBX3-206ENST00000536823 IL4P05112 153 aa5.16□□□□□ -1.58
YBX3-206ENST00000536823 HOXB5P09067 269 aa5.16□□□□□ -1.58
YBX3-206ENST00000536823 IAPPP10997 89 aa5.16□□□□□ -1.58
YBX3-206ENST00000536823 BTCP35070 178 aa5.16□□□□□ -1.58
YBX3-206ENST00000536823 GPX4P36969 197 aaPredicted RBP5.16□□□□□ -1.58
YBX3-206ENST00000536823 EIF2B2P49770 351 aaKnown RBP5.16□□□□□ -1.58
YBX3-206ENST00000536823 DEFB131AP59861 70 aa5.16□□□□□ -1.58
YBX3-206ENST00000536823 USF2Q15853 346 aaPredicted RBP5.16□□□□□ -1.58
YBX3-206ENST00000536823 GGNBP1Q5YKI7 109 aa5.16□□□□□ -1.58
YBX3-206ENST00000536823 FAM24BQ8N5W8 94 aa5.16□□□□□ -1.58
YBX3-206ENST00000536823 STXBP6Q8NFX7 210 aa5.16□□□□□ -1.58
YBX3-206ENST00000536823 GLMPQ8WWB7 406 aa5.16□□□□□ -1.58
YBX3-206ENST00000536823 RNF183Q96D59 192 aa5.16□□□□□ -1.58
YBX3-206ENST00000536823 GRAMD2BQ96HH9 432 aa5.16□□□□□ -1.58
YBX3-206ENST00000536823 SLC35E1Q96K37 410 aa5.16□□□□□ -1.58
YBX3-206ENST00000536823 CIB3Q96Q77 187 aaPredicted RBP5.16□□□□□ -1.58
YBX3-206ENST00000536823 C7orf50Q9BRJ6 194 aaKnown RBP5.16□□□□□ -1.58
YBX3-206ENST00000536823 NDUFA13Q9P0J0 144 aa5.16□□□□□ -1.58
YBX3-206ENST00000536823 IGKV1D-37A0A075B6S9 117 aa5.15□□□□□ -1.59
YBX3-206ENST00000536823 A0A0J9YWU9 116 aa5.15□□□□□ -1.59
YBX3-206ENST00000536823 LINC00854A0A1B0GVQ3 168 aa5.15□□□□□ -1.59
YBX3-206ENST00000536823 C9orf170A2RU37 121 aa5.15□□□□□ -1.59
YBX3-206ENST00000536823 HELTA6NFD8 242 aa5.15□□□□□ -1.59
YBX3-206ENST00000536823 CENPXA8MT69 81 aa5.15□□□□□ -1.59
YBX3-206ENST00000536823 MPTX1A8MV57 137 aa5.15□□□□□ -1.59
YBX3-206ENST00000536823 SYNGR2O43760 224 aa5.15□□□□□ -1.59
YBX3-206ENST00000536823 MBPP02686 304 aaPredicted RBP5.15□□□□□ -1.59
YBX3-206ENST00000536823 ZNF688P0C7X2 276 aa5.15□□□□□ -1.59
YBX3-206ENST00000536823 RD3LP0DJH9 198 aa5.15□□□□□ -1.59
YBX3-206ENST00000536823 PSG1P11464 419 aa5.15□□□□□ -1.59
YBX3-206ENST00000536823 IL7P13232 177 aa5.15□□□□□ -1.59
YBX3-206ENST00000536823 NUP62P37198 522 aaPredicted RBP5.15□□□□□ -1.59
YBX3-206ENST00000536823 RAB11AP62491 216 aa5.15□□□□□ -1.59
YBX3-206ENST00000536823 DHRS2Q13268 280 aa5.15□□□□□ -1.59
YBX3-206ENST00000536823 GAMTQ14353 236 aa5.15□□□□□ -1.59
YBX3-206ENST00000536823 LEMD1Q68G75 181 aa5.15□□□□□ -1.59
YBX3-206ENST00000536823 OR8G2PQ6IF36 304 aa5.15□□□□□ -1.59
YBX3-206ENST00000536823 C16orf54Q6UWD8 224 aa5.15□□□□□ -1.59
YBX3-206ENST00000536823 LYG2Q86SG7 212 aa5.15□□□□□ -1.59
YBX3-206ENST00000536823 OR51G1Q8NGK1 321 aa5.15□□□□□ -1.59
YBX3-206ENST00000536823 DCANP1Q8TF63 244 aa5.15□□□□□ -1.59
YBX3-206ENST00000536823 GATAD1Q8WUU5 269 aa5.15□□□□□ -1.59
YBX3-206ENST00000536823 RNF125Q96EQ8 232 aa5.15□□□□□ -1.59
YBX3-206ENST00000536823 CSTL1Q9H114 145 aa5.15□□□□□ -1.59
YBX3-206ENST00000536823 FLVCR2Q9UPI3 526 aa5.15□□□□□ -1.59
YBX3-206ENST00000536823 ZFP92A6NM28 416 aa5.14□□□□□ -1.59
YBX3-206ENST00000536823 PRSS46E5RG02 174 aa5.14□□□□□ -1.59
YBX3-206ENST00000536823 WRBO00258 174 aa5.14□□□□□ -1.59
YBX3-206ENST00000536823 ADAP1O75689 374 aa5.14□□□□□ -1.59
YBX3-206ENST00000536823 CA1P00915 261 aaPredicted RBP5.14□□□□□ -1.59
YBX3-206ENST00000536823 FABP1P07148 127 aa5.14□□□□□ -1.59
YBX3-206ENST00000536823 OR4E1P0C645 316 aa5.14□□□□□ -1.59
YBX3-206ENST00000536823 RPP30P78346 268 aaKnown RBP5.14□□□□□ -1.59
YBX3-206ENST00000536823 EWSR1Q01844 656 aaKnown RBP eCLIP5.14□□□□□ -1.59
YBX3-206ENST00000536823 TRPT1Q86TN4 253 aaKnown RBP5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms