RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 BPIFCQ8NFQ6 507 aa13.28□□□□□ -0.28
DDX55-204ENST00000536079 OR1B1Q8NGR6 318 aa13.28□□□□□ -0.28
DDX55-204ENST00000536079 TMEM231Q9H6L2 316 aa13.28□□□□□ -0.28
DDX55-204ENST00000536079 MBD2Q9UBB5 411 aa13.28□□□□□ -0.28
DDX55-204ENST00000536079 WDR83OSQ9Y284 106 aa13.28□□□□□ -0.28
DDX55-204ENST00000536079 K7EQG2 157 aa13.27□□□□□ -0.29
DDX55-204ENST00000536079 LINC00869P0C866 280 aa13.27□□□□□ -0.29
DDX55-204ENST00000536079 S100A11P31949 105 aa13.27□□□□□ -0.29
DDX55-204ENST00000536079 STX12Q86Y82 276 aa13.27□□□□□ -0.29
DDX55-204ENST00000536079 STXBP6Q8NFX7 210 aa13.27□□□□□ -0.29
DDX55-204ENST00000536079 DCANP1Q8TF63 244 aa13.27□□□□□ -0.29
DDX55-204ENST00000536079 NARS2Q96I59 477 aaKnown RBP13.27□□□□□ -0.29
DDX55-204ENST00000536079 C17orf77Q96MU5 243 aa13.27□□□□□ -0.29
DDX55-204ENST00000536079 TMEM147Q9BVK8 224 aa13.27□□□□□ -0.29
DDX55-204ENST00000536079 UQCC1Q9NVA1 299 aa13.27□□□□□ -0.29
DDX55-204ENST00000536079 UBE2L5PA0A1B0GUS4 154 aa13.26□□□□□ -0.29
DDX55-204ENST00000536079 DNASE2O00115 360 aaPredicted RBP13.26□□□□□ -0.29
DDX55-204ENST00000536079 PLP1P60201 277 aa13.26□□□□□ -0.29
DDX55-204ENST00000536079 HAGHQ16775 308 aa13.26□□□□□ -0.29
DDX55-204ENST00000536079 LEMD1Q68G75 181 aa13.26□□□□□ -0.29
DDX55-204ENST00000536079 SIGLEC15Q6ZMC9 328 aa13.26□□□□□ -0.29
DDX55-204ENST00000536079 GRAMD2BQ96HH9 432 aa13.26□□□□□ -0.29
DDX55-204ENST00000536079 MAP6D1Q9H9H5 199 aa13.26□□□□□ -0.29
DDX55-204ENST00000536079 CFDP00746 253 aaPredicted RBP13.25□□□□□ -0.29
DDX55-204ENST00000536079 CD5P06127 495 aa13.25□□□□□ -0.29
DDX55-204ENST00000536079 LYL1P12980 280 aa13.25□□□□□ -0.29
DDX55-204ENST00000536079 OR5C1Q8NGR4 320 aa13.25□□□□□ -0.29
DDX55-204ENST00000536079 UHRF2Q96PU4 802 aa13.25□□□□□ -0.29
DDX55-204ENST00000536079 SCRT1Q9BWW7 348 aa13.25□□□□□ -0.29
DDX55-204ENST00000536079 GGTLC1Q9BX51 225 aa13.25□□□□□ -0.29
DDX55-204ENST00000536079 SLC25A31Q9H0C2 315 aa13.25□□□□□ -0.29
DDX55-204ENST00000536079 TRAV2A0A0B4J234 112 aa13.24□□□□□ -0.29
DDX55-204ENST00000536079 ZNF98A6NK75 572 aa13.24□□□□□ -0.29
DDX55-204ENST00000536079 H3BRN7 92 aa13.24□□□□□ -0.29
DDX55-204ENST00000536079 HYPMO75409 117 aa13.24□□□□□ -0.29
DDX55-204ENST00000536079 DEFB131AP59861 70 aa13.24□□□□□ -0.29
DDX55-204ENST00000536079 PAFAH1B2P68402 229 aa13.24□□□□□ -0.29
DDX55-204ENST00000536079 HBG1P69891 147 aa13.24□□□□□ -0.29
DDX55-204ENST00000536079 HBG2P69892 147 aa13.24□□□□□ -0.29
DDX55-204ENST00000536079 CLINT1Q14677 625 aa13.24□□□□□ -0.29
DDX55-204ENST00000536079 MIC13Q5XKP0 118 aa13.24□□□□□ -0.29
DDX55-204ENST00000536079 THAP6Q8TBB0 222 aa13.24□□□□□ -0.29
DDX55-204ENST00000536079 CHAC2Q8WUX2 184 aa13.24□□□□□ -0.29
DDX55-204ENST00000536079 PPP1R14BQ96C90 147 aa13.24□□□□□ -0.29
DDX55-204ENST00000536079 ARL6Q9H0F7 186 aa13.24□□□□□ -0.29
DDX55-204ENST00000536079 SLC25A32Q9H2D1 315 aa13.24□□□□□ -0.29
DDX55-204ENST00000536079 HELTA6NFD8 242 aa13.23□□□□□ -0.29
DDX55-204ENST00000536079 FGF7P21781 194 aa13.23□□□□□ -0.29
DDX55-204ENST00000536079 RPL12P30050 165 aaKnown RBP13.23□□□□□ -0.29
DDX55-204ENST00000536079 CAMLGP49069 296 aa13.23□□□□□ -0.29
DDX55-204ENST00000536079 SELENOTP62341 195 aa13.23□□□□□ -0.29
DDX55-204ENST00000536079 PRR20EP86478 221 aa13.23□□□□□ -0.29
DDX55-204ENST00000536079 PRR20CP86479 221 aa13.23□□□□□ -0.29
DDX55-204ENST00000536079 PRR20DP86480 221 aa13.23□□□□□ -0.29
DDX55-204ENST00000536079 PRR20BP86481 221 aa13.23□□□□□ -0.29
DDX55-204ENST00000536079 PRR20AP86496 221 aa13.23□□□□□ -0.29
DDX55-204ENST00000536079 BAXQ07812 192 aa13.23□□□□□ -0.29
DDX55-204ENST00000536079 ATP6V1FQ16864 119 aa13.23□□□□□ -0.29
DDX55-204ENST00000536079 ZNF546Q86UE3 836 aa13.23□□□□□ -0.29
DDX55-204ENST00000536079 TMEM37Q8WXS4 190 aa13.23□□□□□ -0.29
DDX55-204ENST00000536079 FAM110AQ9BQ89 295 aa13.23□□□□□ -0.29
DDX55-204ENST00000536079 SHANK2-AS3Q9BTD1 123 aa13.23□□□□□ -0.29
DDX55-204ENST00000536079 SLC25A39Q9BZJ4 359 aaPredicted RBP13.23□□□□□ -0.29
DDX55-204ENST00000536079 SLC25A22Q9H936 323 aa13.23□□□□□ -0.29
DDX55-204ENST00000536079 WFDC1Q9HC57 220 aa13.23□□□□□ -0.29
DDX55-204ENST00000536079 RETNQ9HD89 108 aa13.23□□□□□ -0.29
DDX55-204ENST00000536079 HSPB11Q9Y547 144 aa13.23□□□□□ -0.29
DDX55-204ENST00000536079 OR5G3P0C626 314 aa13.22□□□□□ -0.29
DDX55-204ENST00000536079 ZNF688P0C7X2 276 aa13.22□□□□□ -0.29
DDX55-204ENST00000536079 OPCMLQ14982 345 aa13.22□□□□□ -0.29
DDX55-204ENST00000536079 C1orf194Q5T5A4 169 aa13.22□□□□□ -0.29
DDX55-204ENST00000536079 MORN5Q5VZ52 161 aa13.22□□□□□ -0.29
DDX55-204ENST00000536079 TM2D3Q9BRN9 247 aa13.22□□□□□ -0.29
DDX55-204ENST00000536079 SMIM3Q9BZL3 60 aa13.22□□□□□ -0.29
DDX55-204ENST00000536079 HIGD1AQ9Y241 93 aa13.22□□□□□ -0.29
DDX55-204ENST00000536079 G3V3Q6 166 aa13.21□□□□□ -0.29
DDX55-204ENST00000536079 SOCS3O14543 225 aa13.21□□□□□ -0.29
DDX55-204ENST00000536079 GIPP09681 153 aaPredicted RBP13.21□□□□□ -0.29
DDX55-204ENST00000536079 NHLRC4P0CG21 123 aaPredicted RBP13.21□□□□□ -0.29
DDX55-204ENST00000536079 RPL35AP18077 110 aaKnown RBP13.21□□□□□ -0.29
DDX55-204ENST00000536079 OR8I2Q8N0Y5 310 aa13.21□□□□□ -0.29
DDX55-204ENST00000536079 NRN1Q9NPD7 142 aa13.21□□□□□ -0.29
DDX55-204ENST00000536079 KNCNA6PVL3 124 aa13.2□□□□□ -0.3
DDX55-204ENST00000536079 PET100P0DJ07 73 aa13.2□□□□□ -0.3
DDX55-204ENST00000536079 NUP62P37198 522 aaPredicted RBP13.2□□□□□ -0.3
DDX55-204ENST00000536079 AP2S1P53680 142 aaPredicted RBP13.2□□□□□ -0.3
DDX55-204ENST00000536079 DEFB1P60022 68 aa13.2□□□□□ -0.3
DDX55-204ENST00000536079 NPCDR1Q9BY65 106 aa13.2□□□□□ -0.3
DDX55-204ENST00000536079 ARV1Q9H2C2 271 aa13.2□□□□□ -0.3
DDX55-204ENST00000536079 RFNGQ9Y644 331 aa13.2□□□□□ -0.3
DDX55-204ENST00000536079 TENM3Q9P273 2699 aa13.19□□□□□ -0.3
DDX55-204ENST00000536079 LOC102724200A0A096LPH7 203 aaPredicted RBP13.19□□□□□ -0.3
DDX55-204ENST00000536079 RPL29P47914 159 aaKnown RBP13.19□□□□□ -0.3
DDX55-204ENST00000536079 RAP2BP61225 183 aa13.19□□□□□ -0.3
DDX55-204ENST00000536079 GCSAMLQ5JQS6 135 aa13.19□□□□□ -0.3
DDX55-204ENST00000536079 RSG1Q9BU20 258 aa13.19□□□□□ -0.3
DDX55-204ENST00000536079 WDR61Q9GZS3 305 aaKnown RBP13.19□□□□□ -0.3
DDX55-204ENST00000536079 SLC39A9Q9NUM3 307 aa13.19□□□□□ -0.3
DDX55-204ENST00000536079 PFDN2Q9UHV9 154 aa13.19□□□□□ -0.3
DDX55-204ENST00000536079 PXMP4Q9Y6I8 212 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms