RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 HECTD4Q9Y4D8 3996 aa9.48□□□□□ -0.89
RTN3-207ENST00000536011 VPS13DQ5THJ4 4388 aa9.48□□□□□ -0.89
RTN3-207ENST00000536011 ELOA3CA0A087WX78 387 aaPredicted RBP9.48□□□□□ -0.89
RTN3-207ENST00000536011 ISLRO14498 428 aa9.48□□□□□ -0.89
RTN3-207ENST00000536011 PITX3O75364 302 aa9.48□□□□□ -0.89
RTN3-207ENST00000536011 ZNF90Q03938 601 aa9.48□□□□□ -0.89
RTN3-207ENST00000536011 GGNBP1Q5YKI7 109 aa9.48□□□□□ -0.89
RTN3-207ENST00000536011 OR8I2Q8N0Y5 310 aa9.48□□□□□ -0.89
RTN3-207ENST00000536011 LINC00052Q96N35 136 aa9.48□□□□□ -0.89
RTN3-207ENST00000536011 CLUHP3Q96NS8 147 aa9.48□□□□□ -0.89
RTN3-207ENST00000536011 APLNQ9ULZ1 77 aa9.48□□□□□ -0.89
RTN3-207ENST00000536011 SLC45A2Q9UMX9 530 aa9.48□□□□□ -0.89
RTN3-207ENST00000536011 DNAH6Q9C0G6 4158 aa9.48□□□□□ -0.89
RTN3-207ENST00000536011 IGHV4-4A0A075B6R2 117 aa9.47□□□□□ -0.89
RTN3-207ENST00000536011 IGKV1D-37A0A075B6S9 117 aa9.47□□□□□ -0.89
RTN3-207ENST00000536011 TEX48A0A1B0GUV7 120 aa9.47□□□□□ -0.89
RTN3-207ENST00000536011 CCDC160A6NGH7 325 aa9.47□□□□□ -0.89
RTN3-207ENST00000536011 SMIM9A6NGZ8 99 aa9.47□□□□□ -0.89
RTN3-207ENST00000536011 AMBPP02760 352 aa9.47□□□□□ -0.89
RTN3-207ENST00000536011 IAPPP10997 89 aa9.47□□□□□ -0.89
RTN3-207ENST00000536011 GALR1P47211 349 aa9.47□□□□□ -0.89
RTN3-207ENST00000536011 UBE2MP61081 183 aaKnown RBP9.47□□□□□ -0.89
RTN3-207ENST00000536011 EBLN2Q6P2I7 272 aa9.47□□□□□ -0.89
RTN3-207ENST00000536011 THAP8Q8NA92 274 aa9.47□□□□□ -0.89
RTN3-207ENST00000536011 NEU1Q99519 415 aa9.47□□□□□ -0.89
RTN3-207ENST00000536011 SAV1Q9H4B6 383 aaPredicted RBP9.47□□□□□ -0.89
RTN3-207ENST00000536011 V9GYH0 126 aa9.47□□□□□ -0.89
RTN3-207ENST00000536011 DNAH10Q8IVF4 4471 aa9.47□□□□□ -0.89
RTN3-207ENST00000536011 DEFB131BA0A096LNP1 70 aa9.46□□□□□ -0.9
RTN3-207ENST00000536011 SYNGR2O43760 224 aa9.46□□□□□ -0.9
RTN3-207ENST00000536011 SFT2D2O95562 160 aa9.46□□□□□ -0.9
RTN3-207ENST00000536011 INPP1P49441 399 aa9.46□□□□□ -0.9
RTN3-207ENST00000536011 OR2F1Q13607 317 aa9.46□□□□□ -0.9
RTN3-207ENST00000536011 SPANXN2Q5MJ10 180 aa9.46□□□□□ -0.9
RTN3-207ENST00000536011 ZNF705AQ6ZN79 300 aaPredicted RBP9.46□□□□□ -0.9
RTN3-207ENST00000536011 BPIFCQ8NFQ6 507 aa9.46□□□□□ -0.9
RTN3-207ENST00000536011 GPR82Q96P67 336 aa9.46□□□□□ -0.9
RTN3-207ENST00000536011 RPRMQ9NS64 109 aa9.46□□□□□ -0.9
RTN3-207ENST00000536011 ZNF705FA8MVS1 300 aaPredicted RBP9.45□□□□□ -0.9
RTN3-207ENST00000536011 IGKV3-20P01619 116 aa9.45□□□□□ -0.9
RTN3-207ENST00000536011 ZNF705DP0CH99 300 aaPredicted RBP9.45□□□□□ -0.9
RTN3-207ENST00000536011 ZNF705BP0CI00 300 aaPredicted RBP9.45□□□□□ -0.9
RTN3-207ENST00000536011 SPART-AS1P0CW21 52 aa9.45□□□□□ -0.9
RTN3-207ENST00000536011 AKR1C1Q04828 323 aa9.45□□□□□ -0.9
RTN3-207ENST00000536011 PPP1R1AQ13522 171 aa9.45□□□□□ -0.9
RTN3-207ENST00000536011 OR4B1Q8NGF8 309 aa9.45□□□□□ -0.9
RTN3-207ENST00000536011 NDUFAF3Q9BU61 184 aa9.45□□□□□ -0.9
RTN3-207ENST00000536011 WDR12Q9GZL7 423 aaKnown RBP9.45□□□□□ -0.9
RTN3-207ENST00000536011 CELA1Q9UNI1 258 aa9.45□□□□□ -0.9
RTN3-207ENST00000536011 GOLT1BQ9Y3E0 138 aa9.45□□□□□ -0.9
RTN3-207ENST00000536011 STRAPQ9Y3F4 350 aaKnown RBP9.45□□□□□ -0.9
RTN3-207ENST00000536011 RFNGQ9Y644 331 aa9.45□□□□□ -0.9
RTN3-207ENST00000536011 WRBO00258 174 aa9.44□□□□□ -0.9
RTN3-207ENST00000536011 SOCS3O14543 225 aa9.44□□□□□ -0.9
RTN3-207ENST00000536011 HOXB5P09067 269 aa9.44□□□□□ -0.9
RTN3-207ENST00000536011 P0DMU3 169 aa9.44□□□□□ -0.9
RTN3-207ENST00000536011 FAM231AP0DMU4 169 aa9.44□□□□□ -0.9
RTN3-207ENST00000536011 FAM231CP0DMU5 169 aa9.44□□□□□ -0.9
RTN3-207ENST00000536011 PAX9P55771 341 aa9.44□□□□□ -0.9
RTN3-207ENST00000536011 PSG9Q00887 426 aa9.44□□□□□ -0.9
RTN3-207ENST00000536011 ZNF79Q15937 498 aa9.44□□□□□ -0.9
RTN3-207ENST00000536011 C12orf74Q32Q52 190 aa9.44□□□□□ -0.9
RTN3-207ENST00000536011 GDF5OSQ5U4N7 250 aa9.44□□□□□ -0.9
RTN3-207ENST00000536011 S100A7AQ86SG5 101 aa9.44□□□□□ -0.9
RTN3-207ENST00000536011 OR4D5Q8NGN0 318 aa9.44□□□□□ -0.9
RTN3-207ENST00000536011 C16orf92Q96LL3 132 aa9.44□□□□□ -0.9
RTN3-207ENST00000536011 TMEM147Q9BVK8 224 aa9.44□□□□□ -0.9
RTN3-207ENST00000536011 MAGT1Q9H0U3 335 aa9.44□□□□□ -0.9
RTN3-207ENST00000536011 IGHV3OR16-12A0A075B7B8 117 aa9.43□□□□□ -0.9
RTN3-207ENST00000536011 IGKV1OR2-108A0A075B7D4 117 aa9.43□□□□□ -0.9
RTN3-207ENST00000536011 NAP1L6A6NFF2 107 aa9.43□□□□□ -0.9
RTN3-207ENST00000536011 SPANXN5Q5MJ07 72 aa9.43□□□□□ -0.9
RTN3-207ENST00000536011 TRIQKQ629K1 86 aa9.43□□□□□ -0.9
RTN3-207ENST00000536011 CCDC190Q86UF4 302 aa9.43□□□□□ -0.9
RTN3-207ENST00000536011 OR1B1Q8NGR6 318 aa9.43□□□□□ -0.9
RTN3-207ENST00000536011 FAM210BQ96KR6 192 aa9.43□□□□□ -0.9
RTN3-207ENST00000536011 C7orf50Q9BRJ6 194 aaKnown RBP9.43□□□□□ -0.9
RTN3-207ENST00000536011 SLC25A22Q9H936 323 aa9.43□□□□□ -0.9
RTN3-207ENST00000536011 A0A0J9YX75 114 aa9.42□□□□□ -0.9
RTN3-207ENST00000536011 ZNF98A6NK75 572 aa9.42□□□□□ -0.9
RTN3-207ENST00000536011 IFNA21P01568 189 aa9.42□□□□□ -0.9
RTN3-207ENST00000536011 HBE1P02100 147 aa9.42□□□□□ -0.9
RTN3-207ENST00000536011 ORM2P19652 201 aa9.42□□□□□ -0.9
RTN3-207ENST00000536011 EMP1P54849 157 aa9.42□□□□□ -0.9
RTN3-207ENST00000536011 FAM78BQ5VT40 261 aa9.42□□□□□ -0.9
RTN3-207ENST00000536011 ACOT7LQ6ZUV0 252 aa9.42□□□□□ -0.9
RTN3-207ENST00000536011 ZNF767PQ75MW2 155 aa9.42□□□□□ -0.9
RTN3-207ENST00000536011 ZNF709Q8N972 641 aa9.42□□□□□ -0.9
RTN3-207ENST00000536011 SLC25A32Q9H2D1 315 aa9.42□□□□□ -0.9
RTN3-207ENST00000536011 DOK5Q9P104 306 aa9.42□□□□□ -0.9
RTN3-207ENST00000536011 RNF24Q9Y225 148 aa9.42□□□□□ -0.9
RTN3-207ENST00000536011 SMCO3A2RU48 225 aa9.41□□□□□ -0.9
RTN3-207ENST00000536011 CENPXA8MT69 81 aa9.41□□□□□ -0.9
RTN3-207ENST00000536011 PRSS46E5RG02 174 aa9.41□□□□□ -0.9
RTN3-207ENST00000536011 H3BP45 60 aa9.41□□□□□ -0.9
RTN3-207ENST00000536011 ZNF701M0R085 212 aaPredicted RBP9.41□□□□□ -0.9
RTN3-207ENST00000536011 FXYD7P58549 80 aa9.41□□□□□ -0.9
RTN3-207ENST00000536011 RAP2BP61225 183 aa9.41□□□□□ -0.9
RTN3-207ENST00000536011 SELENOTP62341 195 aa9.41□□□□□ -0.9
RTN3-207ENST00000536011 LINC00336Q6ZUF6 198 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms