RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 PI3P19957 117 aa8.36□□□□□ -1.07
SVIP-205ENST00000533774 M6PRP20645 277 aa8.36□□□□□ -1.07
SVIP-205ENST00000533774 CNN1P51911 297 aaKnown RBP8.36□□□□□ -1.07
SVIP-205ENST00000533774 AKR1C2P52895 323 aa8.36□□□□□ -1.07
SVIP-205ENST00000533774 AQP4P55087 323 aa8.36□□□□□ -1.07
SVIP-205ENST00000533774 SCAND1P57086 179 aa8.36□□□□□ -1.07
SVIP-205ENST00000533774 TAS2R46P59540 309 aa8.36□□□□□ -1.07
SVIP-205ENST00000533774 RNASE12Q5GAN4 147 aaKnown RBP8.36□□□□□ -1.07
SVIP-205ENST00000533774 IGFL4Q6B9Z1 124 aa8.36□□□□□ -1.07
SVIP-205ENST00000533774 SYT8Q8NBV8 401 aa8.36□□□□□ -1.07
SVIP-205ENST00000533774 NOP10Q9NPE3 64 aaKnown RBP8.36□□□□□ -1.07
SVIP-205ENST00000533774 RPRMQ9NS64 109 aa8.36□□□□□ -1.07
SVIP-205ENST00000533774 FAM30AQ9NZY2 134 aa8.36□□□□□ -1.07
SVIP-205ENST00000533774 PLA2G2DQ9UNK4 145 aa8.36□□□□□ -1.07
SVIP-205ENST00000533774 PKHD1L1Q86WI1 4243 aa8.36□□□□□ -1.07
SVIP-205ENST00000533774 IGKV1D-37A0A075B6S9 117 aa8.35□□□□□ -1.07
SVIP-205ENST00000533774 HTR2BP41595 481 aa8.35□□□□□ -1.07
SVIP-205ENST00000533774 UCP3P55916 312 aa8.35□□□□□ -1.07
SVIP-205ENST00000533774 SUPT4H1P63272 117 aaKnown RBP8.35□□□□□ -1.07
SVIP-205ENST00000533774 ZNF90Q03938 601 aa8.35□□□□□ -1.07
SVIP-205ENST00000533774 LPCAT3Q6P1A2 487 aa8.35□□□□□ -1.07
SVIP-205ENST00000533774 LINC00612Q8N6U2 182 aa8.35□□□□□ -1.07
SVIP-205ENST00000533774 RNASEH2CQ8TDP1 164 aaKnown RBP8.35□□□□□ -1.07
SVIP-205ENST00000533774 PDCD10Q9BUL8 212 aa8.35□□□□□ -1.07
SVIP-205ENST00000533774 SLC25A39Q9BZJ4 359 aaPredicted RBP8.35□□□□□ -1.07
SVIP-205ENST00000533774 TIMM8BQ9Y5J9 83 aaPredicted RBP8.35□□□□□ -1.07
SVIP-205ENST00000533774 RNF213Q63HN8 5207 aa8.34□□□□□ -1.07
SVIP-205ENST00000533774 A0A096LPF7 62 aa8.34□□□□□ -1.07
SVIP-205ENST00000533774 SIVA1O15304 175 aa8.34□□□□□ -1.07
SVIP-205ENST00000533774 PRB4P10163 310 aaPredicted RBP8.34□□□□□ -1.07
SVIP-205ENST00000533774 HTN1P15515 57 aa8.34□□□□□ -1.07
SVIP-205ENST00000533774 S100GP29377 79 aa8.34□□□□□ -1.07
SVIP-205ENST00000533774 SPCS3P61009 180 aa8.34□□□□□ -1.07
SVIP-205ENST00000533774 SP6Q3SY56 376 aa8.34□□□□□ -1.07
SVIP-205ENST00000533774 AARDQ4LEZ3 155 aa8.34□□□□□ -1.07
SVIP-205ENST00000533774 OR8G2PQ6IF36 304 aa8.34□□□□□ -1.07
SVIP-205ENST00000533774 RNASE8Q8TDE3 154 aaKnown RBP8.34□□□□□ -1.07
SVIP-205ENST00000533774 C16orf92Q96LL3 132 aa8.34□□□□□ -1.07
SVIP-205ENST00000533774 LINC01587Q99440 93 aa8.34□□□□□ -1.07
SVIP-205ENST00000533774 HEYLQ9NQ87 328 aaPredicted RBP8.34□□□□□ -1.07
SVIP-205ENST00000533774 TRAV8-2A0A0B4J237 113 aa8.33□□□□□ -1.08
SVIP-205ENST00000533774 H3BS24 57 aa8.33□□□□□ -1.08
SVIP-205ENST00000533774 RND3P61587 244 aa8.33□□□□□ -1.08
SVIP-205ENST00000533774 B2MP61769 119 aa8.33□□□□□ -1.08
SVIP-205ENST00000533774 TSPAN5P62079 268 aa8.33□□□□□ -1.08
SVIP-205ENST00000533774 C1orf194Q5T5A4 169 aa8.33□□□□□ -1.08
SVIP-205ENST00000533774 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.33□□□□□ -1.08
SVIP-205ENST00000533774 RNF182Q8N6D2 247 aa8.33□□□□□ -1.08
SVIP-205ENST00000533774 C16orf74Q96GX8 76 aa8.33□□□□□ -1.08
SVIP-205ENST00000533774 VSIG2Q96IQ7 327 aa8.33□□□□□ -1.08
SVIP-205ENST00000533774 SLC25A32Q9H2D1 315 aa8.33□□□□□ -1.08
SVIP-205ENST00000533774 H3BNG1 76 aa8.32□□□□□ -1.08
SVIP-205ENST00000533774 UCP1P25874 307 aa8.32□□□□□ -1.08
SVIP-205ENST00000533774 NUP62P37198 522 aaPredicted RBP8.32□□□□□ -1.08
SVIP-205ENST00000533774 TAS2R60P59551 318 aa8.32□□□□□ -1.08
SVIP-205ENST00000533774 LYZP61626 148 aa8.32□□□□□ -1.08
SVIP-205ENST00000533774 GPR141Q7Z602 305 aa8.32□□□□□ -1.08
SVIP-205ENST00000533774 OR8I2Q8N0Y5 310 aa8.32□□□□□ -1.08
SVIP-205ENST00000533774 ARRDC1Q8N5I2 433 aa8.32□□□□□ -1.08
SVIP-205ENST00000533774 SLC24A4Q8NFF2 622 aa8.32□□□□□ -1.08
SVIP-205ENST00000533774 OR52E5Q8NH55 327 aa8.32□□□□□ -1.08
SVIP-205ENST00000533774 NRG4Q8WWG1 115 aa8.32□□□□□ -1.08
SVIP-205ENST00000533774 TMEM70Q9BUB7 260 aa8.32□□□□□ -1.08
SVIP-205ENST00000533774 GAGE12BA1L429 117 aa8.31□□□□□ -1.08
SVIP-205ENST00000533774 BOLA2-SMG1P6H3BVE0 249 aa8.31□□□□□ -1.08
SVIP-205ENST00000533774 GAGE7O76087 117 aa8.31□□□□□ -1.08
SVIP-205ENST00000533774 DUSP14O95147 198 aaKnown RBP8.31□□□□□ -1.08
SVIP-205ENST00000533774 NXPH4O95158 308 aa8.31□□□□□ -1.08
SVIP-205ENST00000533774 GAGE12FP0CL80 117 aa8.31□□□□□ -1.08
SVIP-205ENST00000533774 GAGE12GP0CL81 117 aa8.31□□□□□ -1.08
SVIP-205ENST00000533774 GAGE12IP0CL82 117 aa8.31□□□□□ -1.08
SVIP-205ENST00000533774 PIGPP57054 158 aa8.31□□□□□ -1.08
SVIP-205ENST00000533774 OR2F1Q13607 317 aa8.31□□□□□ -1.08
SVIP-205ENST00000533774 KIR3DS1Q14943 382 aa8.31□□□□□ -1.08
SVIP-205ENST00000533774 TMEM144Q7Z5S9 345 aa8.31□□□□□ -1.08
SVIP-205ENST00000533774 OR10J6PQ8NGY7 276 aa8.31□□□□□ -1.08
SVIP-205ENST00000533774 LHFPL5Q8TAF8 219 aa8.31□□□□□ -1.08
SVIP-205ENST00000533774 GPX8Q8TED1 209 aa8.31□□□□□ -1.08
SVIP-205ENST00000533774 RSG1Q9BU20 258 aa8.31□□□□□ -1.08
SVIP-205ENST00000533774 SSR3Q9UNL2 185 aa8.31□□□□□ -1.08
SVIP-205ENST00000533774 C3orf85A0A1B0GTC6 90 aa8.3□□□□□ -1.08
SVIP-205ENST00000533774 PGAM2P15259 253 aa8.3□□□□□ -1.08
SVIP-205ENST00000533774 PRSS3P35030 304 aa8.3□□□□□ -1.08
SVIP-205ENST00000533774 TRIM16LQ309B1 348 aa8.3□□□□□ -1.08
SVIP-205ENST00000533774 NMSQ5H8A3 153 aa8.3□□□□□ -1.08
SVIP-205ENST00000533774 ETFRF1Q6IPR1 90 aa8.3□□□□□ -1.08
SVIP-205ENST00000533774 SPARTQ8N0X7 666 aa8.3□□□□□ -1.08
SVIP-205ENST00000533774 TMEM263Q8WUH6 116 aaKnown RBP8.3□□□□□ -1.08
SVIP-205ENST00000533774 S100A16Q96FQ6 103 aaKnown RBP8.3□□□□□ -1.08
SVIP-205ENST00000533774 VCXQ9H320 206 aa8.3□□□□□ -1.08
SVIP-205ENST00000533774 TMPRSS5Q9H3S3 457 aa8.3□□□□□ -1.08
SVIP-205ENST00000533774 MEOX2P50222 304 aa8.29□□□□□ -1.08
SVIP-205ENST00000533774 KLF9Q13886 244 aaPredicted RBP8.29□□□□□ -1.08
SVIP-205ENST00000533774 GAMTQ14353 236 aa8.29□□□□□ -1.08
SVIP-205ENST00000533774 MEF2DQ14814 521 aa8.29□□□□□ -1.08
SVIP-205ENST00000533774 ZNF493Q6ZR52 646 aa8.29□□□□□ -1.08
SVIP-205ENST00000533774 TMED4Q7Z7H5 227 aa8.29□□□□□ -1.08
SVIP-205ENST00000533774 TMEM256Q8N2U0 113 aa8.29□□□□□ -1.08
SVIP-205ENST00000533774 DEFB104AQ8WTQ1 72 aa8.29□□□□□ -1.08
SVIP-205ENST00000533774 PPP1R14BQ96C90 147 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms