RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 MRPL27Q9P0M9 148 aaKnown RBP9.05□□□□□ -0.96
COMMD9-208ENST00000533643 SMPXQ9UHP9 88 aa9.05□□□□□ -0.96
COMMD9-208ENST00000533643 RABAC1Q9UI14 185 aa9.05□□□□□ -0.96
COMMD9-208ENST00000533643 TIMM9Q9Y5J7 89 aa9.05□□□□□ -0.96
COMMD9-208ENST00000533643 U3KQE9 123 aa9.05□□□□□ -0.96
COMMD9-208ENST00000533643 SEC14L6B5MCN3 397 aa9.04□□□□□ -0.96
COMMD9-208ENST00000533643 HNRNPCP07910 306 aaKnown RBP eCLIP9.04□□□□□ -0.96
COMMD9-208ENST00000533643 CBLN1P23435 193 aa9.04□□□□□ -0.96
COMMD9-208ENST00000533643 GCSAMLQ5JQS6 135 aa9.04□□□□□ -0.96
COMMD9-208ENST00000533643 FFAR4Q5NUL3 377 aa9.04□□□□□ -0.96
COMMD9-208ENST00000533643 PRR31Q5SQ13 230 aa9.04□□□□□ -0.96
COMMD9-208ENST00000533643 TMEM37Q8WXS4 190 aa9.04□□□□□ -0.96
COMMD9-208ENST00000533643 MARC2Q969Z3 335 aa9.04□□□□□ -0.96
COMMD9-208ENST00000533643 GNPNAT1Q96EK6 184 aaPredicted RBP9.04□□□□□ -0.96
COMMD9-208ENST00000533643 PSMG3Q9BT73 122 aaPredicted RBP9.04□□□□□ -0.96
COMMD9-208ENST00000533643 HIGD1AQ9Y241 93 aa9.04□□□□□ -0.96
COMMD9-208ENST00000533643 IGHV3OR16-13A0A075B7E8 117 aa9.03□□□□□ -0.96
COMMD9-208ENST00000533643 IGHV3-74A0A0B4J1X5 117 aa9.03□□□□□ -0.96
COMMD9-208ENST00000533643 COX7A2P2O60397 106 aa9.03□□□□□ -0.96
COMMD9-208ENST00000533643 OR5G3P0C626 314 aa9.03□□□□□ -0.96
COMMD9-208ENST00000533643 Q6ZRG5 221 aa9.03□□□□□ -0.96
COMMD9-208ENST00000533643 SLC51BQ86UW2 128 aa9.03□□□□□ -0.96
COMMD9-208ENST00000533643 OR1L4Q8NGR5 311 aa9.03□□□□□ -0.96
COMMD9-208ENST00000533643 OR2G3Q8NGZ4 309 aa9.03□□□□□ -0.96
COMMD9-208ENST00000533643 STOML3Q8TAV4 291 aa9.03□□□□□ -0.96
COMMD9-208ENST00000533643 ST8SIA2Q92186 375 aa9.03□□□□□ -0.96
COMMD9-208ENST00000533643 PPP1R14BQ96C90 147 aa9.03□□□□□ -0.96
COMMD9-208ENST00000533643 SLC25A32Q9H2D1 315 aa9.03□□□□□ -0.96
COMMD9-208ENST00000533643 DNAJC4Q9NNZ3 241 aa9.03□□□□□ -0.96
COMMD9-208ENST00000533643 SIGLEC8Q9NYZ4 499 aa9.03□□□□□ -0.96
COMMD9-208ENST00000533643 ELOA3CA0A087WX78 387 aaPredicted RBP9.02□□□□□ -0.97
COMMD9-208ENST00000533643 IGHV3-66A0A0C4DH42 116 aa9.02□□□□□ -0.97
COMMD9-208ENST00000533643 CHEK1O14757 476 aa9.02□□□□□ -0.97
COMMD9-208ENST00000533643 SAP30O75446 220 aa9.02□□□□□ -0.97
COMMD9-208ENST00000533643 SPP1P10451 314 aa9.02□□□□□ -0.97
COMMD9-208ENST00000533643 IGLL1P15814 213 aa9.02□□□□□ -0.97
COMMD9-208ENST00000533643 C4BPBP20851 252 aa9.02□□□□□ -0.97
COMMD9-208ENST00000533643 EIF5AP63241 154 aaKnown RBP9.02□□□□□ -0.97
COMMD9-208ENST00000533643 SERF2P84101 59 aa9.02□□□□□ -0.97
COMMD9-208ENST00000533643 C10orf113Q5VZT2 155 aa9.02□□□□□ -0.97
COMMD9-208ENST00000533643 BAP18Q8IXM2 172 aa9.02□□□□□ -0.97
COMMD9-208ENST00000533643 UHRF2Q96PU4 802 aa9.02□□□□□ -0.97
COMMD9-208ENST00000533643 SHANK2-AS3Q9BTD1 123 aa9.02□□□□□ -0.97
COMMD9-208ENST00000533643 RHPN1-AS1Q9BWJ2 59 aa9.02□□□□□ -0.97
COMMD9-208ENST00000533643 SLC25A39Q9BZJ4 359 aaPredicted RBP9.02□□□□□ -0.97
COMMD9-208ENST00000533643 VSIRQ9H7M9 311 aa9.02□□□□□ -0.97
COMMD9-208ENST00000533643 MLXQ9UH92 298 aa9.02□□□□□ -0.97
COMMD9-208ENST00000533643 SELENOKQ9Y6D0 94 aa9.02□□□□□ -0.97
COMMD9-208ENST00000533643 ZNF98A6NK75 572 aa9.01□□□□□ -0.97
COMMD9-208ENST00000533643 H3BRN7 92 aa9.01□□□□□ -0.97
COMMD9-208ENST00000533643 BUB3O43684 328 aa9.01□□□□□ -0.97
COMMD9-208ENST00000533643 TPT1P13693 172 aaKnown RBP9.01□□□□□ -0.97
COMMD9-208ENST00000533643 DEFB114Q30KQ6 69 aa9.01□□□□□ -0.97
COMMD9-208ENST00000533643 MORN5Q5VZ52 161 aa9.01□□□□□ -0.97
COMMD9-208ENST00000533643 LEMD1Q68G75 181 aa9.01□□□□□ -0.97
COMMD9-208ENST00000533643 C16orf54Q6UWD8 224 aa9.01□□□□□ -0.97
COMMD9-208ENST00000533643 LINC00305Q7Z4B0 112 aa9.01□□□□□ -0.97
COMMD9-208ENST00000533643 GATAD1Q8WUU5 269 aa9.01□□□□□ -0.97
COMMD9-208ENST00000533643 NARS2Q96I59 477 aaKnown RBP9.01□□□□□ -0.97
COMMD9-208ENST00000533643 PFDN5Q99471 154 aa9.01□□□□□ -0.97
COMMD9-208ENST00000533643 MCRIP2Q9BUT9 160 aaKnown RBP9.01□□□□□ -0.97
COMMD9-208ENST00000533643 SCRT1Q9BWW7 348 aa9.01□□□□□ -0.97
COMMD9-208ENST00000533643 PLA2G2EQ9NZK7 142 aa9.01□□□□□ -0.97
COMMD9-208ENST00000533643 PFDN2Q9UHV9 154 aa9.01□□□□□ -0.97
COMMD9-208ENST00000533643 A0A1W2PS18 150 aa9□□□□□ -0.97
COMMD9-208ENST00000533643 SEC11BP0C7V7 166 aa9□□□□□ -0.97
COMMD9-208ENST00000533643 M6PRP20645 277 aa9□□□□□ -0.97
COMMD9-208ENST00000533643 RAB2AP61019 212 aa9□□□□□ -0.97
COMMD9-208ENST00000533643 ACOT6Q3I5F7 207 aaPredicted RBP9□□□□□ -0.97
COMMD9-208ENST00000533643 C9orf66Q5T8R8 295 aa9□□□□□ -0.97
COMMD9-208ENST00000533643 SPATA31B1PQ5VZV4 182 aa9□□□□□ -0.97
COMMD9-208ENST00000533643 TMED6Q8WW62 240 aa9□□□□□ -0.97
COMMD9-208ENST00000533643 GLMPQ8WWB7 406 aa9□□□□□ -0.97
COMMD9-208ENST00000533643 GRAMD2BQ96HH9 432 aa9□□□□□ -0.97
COMMD9-208ENST00000533643 RNF2Q99496 336 aa9□□□□□ -0.97
COMMD9-208ENST00000533643 TMEM231Q9H6L2 316 aa9□□□□□ -0.97
COMMD9-208ENST00000533643 TECRQ9NZ01 308 aaKnown RBP9□□□□□ -0.97
COMMD9-208ENST00000533643 TRAV5A0A0B4J249 113 aa8.99□□□□□ -0.97
COMMD9-208ENST00000533643 IGLV1-51P01701 117 aa8.99□□□□□ -0.97
COMMD9-208ENST00000533643 MBP02144 154 aa8.99□□□□□ -0.97
COMMD9-208ENST00000533643 S100A7P31151 101 aa8.99□□□□□ -0.97
COMMD9-208ENST00000533643 BMI1P35226 326 aa8.99□□□□□ -0.97
COMMD9-208ENST00000533643 INSL3P51460 131 aa8.99□□□□□ -0.97
COMMD9-208ENST00000533643 TMEM41BQ5BJD5 291 aa8.99□□□□□ -0.97
COMMD9-208ENST00000533643 C1orf194Q5T5A4 169 aa8.99□□□□□ -0.97
COMMD9-208ENST00000533643 FAM78BQ5VT40 261 aa8.99□□□□□ -0.97
COMMD9-208ENST00000533643 TCF24Q7RTU0 167 aa8.99□□□□□ -0.97
COMMD9-208ENST00000533643 S100A7AQ86SG5 101 aa8.99□□□□□ -0.97
COMMD9-208ENST00000533643 RPP25LQ8N5L8 163 aaKnown RBP8.99□□□□□ -0.97
COMMD9-208ENST00000533643 OR10G4Q8NGN3 311 aa8.99□□□□□ -0.97
COMMD9-208ENST00000533643 OR10G9Q8NGN4 311 aa8.99□□□□□ -0.97
COMMD9-208ENST00000533643 OR10G7Q8NGN6 311 aa8.99□□□□□ -0.97
COMMD9-208ENST00000533643 DYNLRB2Q8TF09 96 aa8.99□□□□□ -0.97
COMMD9-208ENST00000533643 SLC25A22Q9H936 323 aa8.99□□□□□ -0.97
COMMD9-208ENST00000533643 SEPSECSQ9HD40 501 aaKnown RBP8.99□□□□□ -0.97
COMMD9-208ENST00000533643 RPRMQ9NS64 109 aa8.99□□□□□ -0.97
COMMD9-208ENST00000533643 NOTCH3Q9UM47 2321 aa8.98□□□□□ -0.97
COMMD9-208ENST00000533643 IZUMO1RA6ND01 250 aa8.98□□□□□ -0.97
COMMD9-208ENST00000533643 WIPF1O43516 503 aa8.98□□□□□ -0.97
COMMD9-208ENST00000533643 RHOBP62745 196 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms