RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 KLK15Q9H2R5 256 aa10.07□□□□□ -0.8
BDNF-218ENST00000533246 LINC00527Q9UJ94 153 aa10.07□□□□□ -0.8
BDNF-218ENST00000533246 SLC25A15Q9Y619 301 aa10.07□□□□□ -0.8
BDNF-218ENST00000533246 IGKV1D-17A0A075B6S4 117 aa10.07□□□□□ -0.8
BDNF-218ENST00000533246 SNCGO76070 127 aa10.07□□□□□ -0.8
BDNF-218ENST00000533246 KCNS1Q96KK3 526 aa10.07□□□□□ -0.8
BDNF-218ENST00000533246 C15orf61A6NNL5 157 aa10.07□□□□□ -0.8
BDNF-218ENST00000533246 CD5LO43866 347 aa10.07□□□□□ -0.8
BDNF-218ENST00000533246 LEPROTL1O95214 131 aa10.07□□□□□ -0.8
BDNF-218ENST00000533246 KLF17Q5JT82 389 aaPredicted RBP10.07□□□□□ -0.8
BDNF-218ENST00000533246 FOXL2NBQ6ZUU3 175 aa10.07□□□□□ -0.8
BDNF-218ENST00000533246 VENTXO95231 258 aa10.06□□□□□ -0.8
BDNF-218ENST00000533246 COLCA1Q6ZS62 124 aa10.06□□□□□ -0.8
BDNF-218ENST00000533246 LAMA3Q16787 3333 aa10.06□□□□□ -0.8
BDNF-218ENST00000533246 FOXI3A8MTJ6 420 aaPredicted RBP10.06□□□□□ -0.8
BDNF-218ENST00000533246 NDUFB8O95169 186 aa10.06□□□□□ -0.8
BDNF-218ENST00000533246 IGKV1-16P04430 117 aa10.06□□□□□ -0.8
BDNF-218ENST00000533246 C3orf79P0CE67 100 aa10.06□□□□□ -0.8
BDNF-218ENST00000533246 ADAMTSL5Q6ZMM2 481 aa10.06□□□□□ -0.8
BDNF-218ENST00000533246 RPUSD1Q9UJJ7 312 aaKnown RBP10.06□□□□□ -0.8
BDNF-218ENST00000533246 NPIPB11E5RHQ5 1161 aa10.06□□□□□ -0.8
BDNF-218ENST00000533246 TM4SF5O14894 197 aa10.06□□□□□ -0.8
BDNF-218ENST00000533246 SRSF4Q08170 494 aaKnown RBP10.06□□□□□ -0.8
BDNF-218ENST00000533246 TMEM78Q5T7P6 136 aa10.06□□□□□ -0.8
BDNF-218ENST00000533246 TEX43Q6ZNM6 134 aa10.06□□□□□ -0.8
BDNF-218ENST00000533246 GGTLC1Q9BX51 225 aa10.06□□□□□ -0.8
BDNF-218ENST00000533246 SMIM13P0DJ93 91 aa10.05□□□□□ -0.8
BDNF-218ENST00000533246 ID1P41134 155 aa10.05□□□□□ -0.8
BDNF-218ENST00000533246 MEF2CQ06413 473 aaPredicted RBP10.05□□□□□ -0.8
BDNF-218ENST00000533246 DUX4L9Q6RFH8 374 aaPredicted RBP10.05□□□□□ -0.8
BDNF-218ENST00000533246 TCF24Q7RTU0 167 aa10.05□□□□□ -0.8
BDNF-218ENST00000533246 PMCHL2Q9BQD1 86 aa10.05□□□□□ -0.8
BDNF-218ENST00000533246 TMEM70Q9BUB7 260 aa10.05□□□□□ -0.8
BDNF-218ENST00000533246 RPL7P18124 248 aaKnown RBP10.05□□□□□ -0.8
BDNF-218ENST00000533246 ETDBQ3ZM63 59 aa10.05□□□□□ -0.8
BDNF-218ENST00000533246 TMEM136Q6ZRR5 245 aa10.05□□□□□ -0.8
BDNF-218ENST00000533246 COL25A1Q9BXS0 654 aaPredicted RBP10.05□□□□□ -0.8
BDNF-218ENST00000533246 TEX48A0A1B0GUV7 120 aa10.05□□□□□ -0.8
BDNF-218ENST00000533246 FOXH1O75593 365 aa10.05□□□□□ -0.8
BDNF-218ENST00000533246 TOMM40O96008 361 aa10.05□□□□□ -0.8
BDNF-218ENST00000533246 PRR30Q53SZ7 412 aaPredicted RBP10.05□□□□□ -0.8
BDNF-218ENST00000533246 LYRM7Q5U5X0 104 aa10.05□□□□□ -0.8
BDNF-218ENST00000533246 ZNF562Q6V9R5 426 aa10.05□□□□□ -0.8
BDNF-218ENST00000533246 HIVEP2P31629 2446 aa10.05□□□□□ -0.8
BDNF-218ENST00000533246 LOC107984156A0A0G2JMH3 177 aa10.04□□□□□ -0.8
BDNF-218ENST00000533246 PEX7O00628 323 aa10.04□□□□□ -0.8
BDNF-218ENST00000533246 MMP23AO75900 390 aa10.04□□□□□ -0.8
BDNF-218ENST00000533246 GAGE2BQ13066 116 aa10.04□□□□□ -0.8
BDNF-218ENST00000533246 GAGE2EQ4V326 116 aa10.04□□□□□ -0.8
BDNF-218ENST00000533246 WDR86Q86TI4 376 aa10.04□□□□□ -0.8
BDNF-218ENST00000533246 PPP1R27Q86WC6 154 aa10.04□□□□□ -0.8
BDNF-218ENST00000533246 ARL17AQ8IVW1 177 aa10.04□□□□□ -0.8
BDNF-218ENST00000533246 GAGE2DQ9UEU5 116 aa10.04□□□□□ -0.8
BDNF-218ENST00000533246 FBXL7Q9UJT9 491 aa10.04□□□□□ -0.8
BDNF-218ENST00000533246 G3V4G9 280 aa10.04□□□□□ -0.8
BDNF-218ENST00000533246 IGHV3-11P01762 117 aa10.04□□□□□ -0.8
BDNF-218ENST00000533246 KLRB1Q12918 225 aa10.04□□□□□ -0.8
BDNF-218ENST00000533246 TMEM97Q5BJF2 176 aa10.04□□□□□ -0.8
BDNF-218ENST00000533246 ASCL4Q6XD76 172 aa10.04□□□□□ -0.8
BDNF-218ENST00000533246 IL36BQ9NZH7 164 aa10.04□□□□□ -0.8
BDNF-218ENST00000533246 JMJD1CQ15652 2540 aa10.04□□□□□ -0.8
BDNF-218ENST00000533246 CSRP1P21291 193 aaKnown RBP10.04□□□□□ -0.8
BDNF-218ENST00000533246 TIMP3P35625 211 aa10.04□□□□□ -0.8
BDNF-218ENST00000533246 C2orf83Q53S99 150 aa10.04□□□□□ -0.8
BDNF-218ENST00000533246 TMEM14EPQ6UXP3 125 aa10.04□□□□□ -0.8
BDNF-218ENST00000533246 Q6ZR03 302 aa10.04□□□□□ -0.8
BDNF-218ENST00000533246 TIMM23O14925 209 aa10.04□□□□□ -0.8
BDNF-218ENST00000533246 HIST1H1AQ02539 215 aaPredicted RBP10.04□□□□□ -0.8
BDNF-218ENST00000533246 CD69Q07108 199 aa10.04□□□□□ -0.8
BDNF-218ENST00000533246 ACTL10Q5JWF8 245 aa10.04□□□□□ -0.8
BDNF-218ENST00000533246 C18orf15Q96N68 181 aa10.04□□□□□ -0.8
BDNF-218ENST00000533246 TMEM133Q9H2Q1 129 aa10.04□□□□□ -0.8
BDNF-218ENST00000533246 ZFYVE26Q68DK2 2539 aa10.03□□□□□ -0.8
BDNF-218ENST00000533246 HIGD1CA8MV81 97 aa10.03□□□□□ -0.8
BDNF-218ENST00000533246 ZNF324O75467 553 aaPredicted RBP10.03□□□□□ -0.8
BDNF-218ENST00000533246 TMEM200BQ69YZ2 307 aa10.03□□□□□ -0.8
BDNF-218ENST00000533246 LYPD2Q6UXB3 125 aa10.03□□□□□ -0.8
BDNF-218ENST00000533246 SCGB1D4Q6XE38 83 aa10.03□□□□□ -0.8
BDNF-218ENST00000533246 A0A0G2JNJ9 132 aa10.03□□□□□ -0.8
BDNF-218ENST00000533246 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.03□□□□□ -0.8
BDNF-218ENST00000533246 PSG3Q16557 428 aa10.03□□□□□ -0.8
BDNF-218ENST00000533246 Q1RN00 199 aa10.03□□□□□ -0.8
BDNF-218ENST00000533246 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.03□□□□□ -0.8
BDNF-218ENST00000533246 Q9UFV3 132 aa10.03□□□□□ -0.8
BDNF-218ENST00000533246 HLA-DRB1P01911 266 aa10.03□□□□□ -0.8
BDNF-218ENST00000533246 METTL26Q96S19 204 aa10.03□□□□□ -0.8
BDNF-218ENST00000533246 C19orf24Q9BVV8 132 aa10.03□□□□□ -0.8
BDNF-218ENST00000533246 TANC1Q9C0D5 1861 aa10.02□□□□□ -0.8
BDNF-218ENST00000533246 CFPP27918 469 aa10.02□□□□□ -0.8
BDNF-218ENST00000533246 RPS20P60866 119 aaKnown RBP10.02□□□□□ -0.8
BDNF-218ENST00000533246 SAMD5Q5TGI4 173 aa10.02□□□□□ -0.8
BDNF-218ENST00000533246 SPSB3Q6PJ21 355 aa10.02□□□□□ -0.8
BDNF-218ENST00000533246 DTX1Q86Y01 620 aa10.02□□□□□ -0.8
BDNF-218ENST00000533246 C21orf62Q9NYP8 219 aa10.02□□□□□ -0.8
BDNF-218ENST00000533246 APOMO95445 188 aa10.02□□□□□ -0.81
BDNF-218ENST00000533246 PFN1P07737 140 aaKnown RBP10.02□□□□□ -0.81
BDNF-218ENST00000533246 SEC11AP67812 179 aa10.02□□□□□ -0.81
BDNF-218ENST00000533246 TBR1Q16650 682 aa10.02□□□□□ -0.81
BDNF-218ENST00000533246 LINC00479Q96M42 142 aa10.02□□□□□ -0.81
BDNF-218ENST00000533246 AGMATQ9BSE5 352 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms