RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 KIR2DL5BA0A0G2JPC4 375 aa15.1■□□□□ 0.01
CCS-208ENST00000533244 FAM24AA6NFZ4 105 aa15.1■□□□□ 0.01
CCS-208ENST00000533244 BCAP31P51572 246 aa15.1■□□□□ 0.01
CCS-208ENST00000533244 DEFB131AP59861 70 aa15.1■□□□□ 0.01
CCS-208ENST00000533244 SELENOTP62341 195 aa15.1■□□□□ 0.01
CCS-208ENST00000533244 KIR2DL5AQ8N109 375 aa15.1■□□□□ 0.01
CCS-208ENST00000533244 KIR2DL5BQ8NHK3 375 aa15.1■□□□□ 0.01
CCS-208ENST00000533244 NRN1Q9NPD7 142 aa15.1■□□□□ 0.01
CCS-208ENST00000533244 APOC4P55056 127 aa15.09■□□□□ 0.01
CCS-208ENST00000533244 H2BFSP57053 126 aa15.09■□□□□ 0.01
CCS-208ENST00000533244 PLP1P60201 277 aa15.09■□□□□ 0.01
CCS-208ENST00000533244 SLC38A11Q08AI6 406 aa15.09■□□□□ 0.01
CCS-208ENST00000533244 TEPPQ6URK8 271 aa15.09■□□□□ 0.01
CCS-208ENST00000533244 TMEM252Q8N6L7 170 aa15.09■□□□□ 0.01
CCS-208ENST00000533244 SEPSECSQ9HD40 501 aaKnown RBP15.09■□□□□ 0.01
CCS-208ENST00000533244 FBXL17Q9UF56 701 aa15.09■□□□□ 0.01
CCS-208ENST00000533244 IGSF23A1L1A6 192 aa15.09■□□□□ 0.01
CCS-208ENST00000533244 CST7O76096 145 aa15.09■□□□□ 0.01
CCS-208ENST00000533244 EDA2RQ9HAV5 297 aa15.09■□□□□ 0.01
CCS-208ENST00000533244 ZNF688P0C7X2 276 aa15.08■□□□□ 0
CCS-208ENST00000533244 SULT1A1P50225 295 aa15.08■□□□□ 0
CCS-208ENST00000533244 CYCSP99999 105 aaKnown RBP15.08■□□□□ 0
CCS-208ENST00000533244 VWC2Q2TAL6 325 aa15.08■□□□□ 0
CCS-208ENST00000533244 UBE2CO00762 179 aa15.07■□□□□ 0
CCS-208ENST00000533244 SSNA1O43805 119 aa15.07■□□□□ 0
CCS-208ENST00000533244 RPL35AP18077 110 aaKnown RBP15.07■□□□□ 0
CCS-208ENST00000533244 ORM2P19652 201 aa15.07■□□□□ 0
CCS-208ENST00000533244 LEMD1Q68G75 181 aa15.07■□□□□ 0
CCS-208ENST00000533244 Q6ZWC4 215 aa15.07■□□□□ 0
CCS-208ENST00000533244 ZNF98A6NK75 572 aa15.06■□□□□ 0
CCS-208ENST00000533244 H0YIZ8 118 aa15.06■□□□□ 0
CCS-208ENST00000533244 LINC00869P0C866 280 aa15.06■□□□□ 0
CCS-208ENST00000533244 OR1B1Q8NGR6 318 aa15.06■□□□□ 0
CCS-208ENST00000533244 PPP1R14BQ96C90 147 aa15.06■□□□□ 0
CCS-208ENST00000533244 OVOL2Q9BRP0 275 aa15.06■□□□□ 0
CCS-208ENST00000533244 TMEM147Q9BVK8 224 aa15.06■□□□□ 0
CCS-208ENST00000533244 TP53TG1Q9Y2A0 90 aa15.06■□□□□ 0
CCS-208ENST00000533244 H3BRN7 92 aa15.05■□□□□ -0
CCS-208ENST00000533244 SOCS3O14543 225 aa15.05■□□□□ -0
CCS-208ENST00000533244 AGPAT2O15120 278 aa15.05■□□□□ -0
CCS-208ENST00000533244 S100A11P31949 105 aa15.05■□□□□ -0
CCS-208ENST00000533244 ZNF546Q86UE3 836 aa15.05■□□□□ -0
CCS-208ENST00000533244 STX12Q86Y82 276 aa15.05■□□□□ -0
CCS-208ENST00000533244 OR8I2Q8N0Y5 310 aa15.05■□□□□ -0
CCS-208ENST00000533244 TMEM217Q8N7C4 229 aa15.05■□□□□ -0
CCS-208ENST00000533244 MGST2Q99735 147 aa15.05■□□□□ -0
CCS-208ENST00000533244 OR5AC2Q9NZP5 309 aa15.05■□□□□ -0
CCS-208ENST00000533244 WDR83OSQ9Y284 106 aa15.05■□□□□ -0
CCS-208ENST00000533244 E5RGE8 158 aa15.04■□□□□ -0
CCS-208ENST00000533244 RLN2P04090 185 aa15.04■□□□□ -0
CCS-208ENST00000533244 S100A7P31151 101 aa15.04■□□□□ -0
CCS-208ENST00000533244 SHANK2-AS3Q9BTD1 123 aa15.04■□□□□ -0
CCS-208ENST00000533244 SLC25A32Q9H2D1 315 aa15.04■□□□□ -0
CCS-208ENST00000533244 UQCC1Q9NVA1 299 aa15.04■□□□□ -0
CCS-208ENST00000533244 DOK5Q9P104 306 aa15.04■□□□□ -0
CCS-208ENST00000533244 ALG5Q9Y673 324 aa15.04■□□□□ -0
CCS-208ENST00000533244 HYPMO75409 117 aa15.03■□□□□ -0
CCS-208ENST00000533244 HBG1P69891 147 aa15.03■□□□□ -0
CCS-208ENST00000533244 HBG2P69892 147 aa15.03■□□□□ -0
CCS-208ENST00000533244 LRRC37A5PQ49AS3 106 aa15.03■□□□□ -0
CCS-208ENST00000533244 PXDC1Q5TGL8 231 aa15.03■□□□□ -0
CCS-208ENST00000533244 PPP1R1CQ8WVI7 109 aa15.03■□□□□ -0
CCS-208ENST00000533244 C17orf77Q96MU5 243 aa15.03■□□□□ -0
CCS-208ENST00000533244 SLC25A39Q9BZJ4 359 aaPredicted RBP15.03■□□□□ -0
CCS-208ENST00000533244 CSTL1Q9H114 145 aa15.03■□□□□ -0
CCS-208ENST00000533244 HIGD1AQ9Y241 93 aa15.03■□□□□ -0
CCS-208ENST00000533244 RAP2BP61225 183 aa15.02■□□□□ -0
CCS-208ENST00000533244 SNRPD3P62318 126 aaKnown RBP15.02■□□□□ -0
CCS-208ENST00000533244 ATP6V1FQ16864 119 aa15.02■□□□□ -0
CCS-208ENST00000533244 PSMG4Q5JS54 123 aa15.02■□□□□ -0
CCS-208ENST00000533244 PATE2Q6UY27 113 aa15.02■□□□□ -0
CCS-208ENST00000533244 TRPT1Q86TN4 253 aaKnown RBP15.02■□□□□ -0
CCS-208ENST00000533244 GPR82Q96P67 336 aa15.02■□□□□ -0
CCS-208ENST00000533244 SCRT1Q9BWW7 348 aa15.02■□□□□ -0
CCS-208ENST00000533244 SLC25A22Q9H936 323 aa15.02■□□□□ -0
CCS-208ENST00000533244 EWSR1Q01844 656 aaKnown RBP eCLIP15.01□□□□□ -0.01
CCS-208ENST00000533244 DEFB135Q30KP9 77 aa15.01□□□□□ -0.01
CCS-208ENST00000533244 STHQ8IWL8 128 aa15.01□□□□□ -0.01
CCS-208ENST00000533244 CHAC2Q8WUX2 184 aa15.01□□□□□ -0.01
CCS-208ENST00000533244 RNF183Q96D59 192 aa15.01□□□□□ -0.01
CCS-208ENST00000533244 RNF126Q9BV68 326 aa15.01□□□□□ -0.01
CCS-208ENST00000533244 ARL6Q9H0F7 186 aa15.01□□□□□ -0.01
CCS-208ENST00000533244 AGRNO00468 2067 aa15.01□□□□□ -0.01
CCS-208ENST00000533244 KNCNA6PVL3 124 aa15□□□□□ -0.01
CCS-208ENST00000533244 MPC2O95563 127 aa15□□□□□ -0.01
CCS-208ENST00000533244 GALR1P47211 349 aa15□□□□□ -0.01
CCS-208ENST00000533244 CAMLGP49069 296 aa15□□□□□ -0.01
CCS-208ENST00000533244 PSMB3P49720 205 aa15□□□□□ -0.01
CCS-208ENST00000533244 PRR20EP86478 221 aa15□□□□□ -0.01
CCS-208ENST00000533244 PRR20CP86479 221 aa15□□□□□ -0.01
CCS-208ENST00000533244 PRR20DP86480 221 aa15□□□□□ -0.01
CCS-208ENST00000533244 PRR20BP86481 221 aa15□□□□□ -0.01
CCS-208ENST00000533244 PRR20AP86496 221 aa15□□□□□ -0.01
CCS-208ENST00000533244 NHLH2Q02577 135 aa15□□□□□ -0.01
CCS-208ENST00000533244 SAMD13Q5VXD3 122 aa15□□□□□ -0.01
CCS-208ENST00000533244 MUC7Q8TAX7 377 aa15□□□□□ -0.01
CCS-208ENST00000533244 UHRF2Q96PU4 802 aa15□□□□□ -0.01
CCS-208ENST00000533244 SLC25A31Q9H0C2 315 aa15□□□□□ -0.01
CCS-208ENST00000533244 ARV1Q9H2C2 271 aa15□□□□□ -0.01
CCS-208ENST00000533244 UBE2L5PA0A1B0GUS4 154 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms