RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 CLINT1Q14677 625 aa18.54■□□□□ 0.56
USP48-214ENST00000532737 ZNF546Q86UE3 836 aa18.54■□□□□ 0.56
USP48-214ENST00000532737 OR1B1Q8NGR6 318 aa18.54■□□□□ 0.56
USP48-214ENST00000532737 C19orf73Q9NVV2 129 aa18.54■□□□□ 0.56
USP48-214ENST00000532737 DOK5Q9P104 306 aa18.54■□□□□ 0.56
USP48-214ENST00000532737 OR4C46A6NHA9 309 aa18.53■□□□□ 0.56
USP48-214ENST00000532737 CAMLGP49069 296 aa18.53■□□□□ 0.56
USP48-214ENST00000532737 PLP1P60201 277 aa18.53■□□□□ 0.56
USP48-214ENST00000532737 FGL1Q08830 312 aa18.53■□□□□ 0.56
USP48-214ENST00000532737 WFDC10AQ9H1F0 79 aa18.53■□□□□ 0.56
USP48-214ENST00000532737 MS4A6AQ9H2W1 248 aa18.53■□□□□ 0.56
USP48-214ENST00000532737 PFDN2Q9UHV9 154 aa18.53■□□□□ 0.56
USP48-214ENST00000532737 IGHV4-30-4P0DP06 118 aa18.52■□□□□ 0.56
USP48-214ENST00000532737 NUP62P37198 522 aaPredicted RBP18.52■□□□□ 0.56
USP48-214ENST00000532737 RAB31Q13636 194 aa18.52■□□□□ 0.56
USP48-214ENST00000532737 WFDC3Q8IUB2 231 aa18.52■□□□□ 0.56
USP48-214ENST00000532737 PPP1R14BQ96C90 147 aa18.52■□□□□ 0.56
USP48-214ENST00000532737 GGTLC1Q9BX51 225 aa18.52■□□□□ 0.56
USP48-214ENST00000532737 HELTA6NFD8 242 aa18.51■□□□□ 0.55
USP48-214ENST00000532737 HYPMO75409 117 aa18.51■□□□□ 0.55
USP48-214ENST00000532737 FGF7P21781 194 aa18.51■□□□□ 0.55
USP48-214ENST00000532737 PAFAH1B2P68402 229 aa18.51■□□□□ 0.55
USP48-214ENST00000532737 DEFB125Q8N687 156 aa18.51■□□□□ 0.55
USP48-214ENST00000532737 OR2T35Q8NGX2 323 aa18.51■□□□□ 0.55
USP48-214ENST00000532737 COL7A1Q02388 2944 aa18.51■□□□□ 0.55
USP48-214ENST00000532737 OR11H12B2RN74 326 aa18.5■□□□□ 0.55
USP48-214ENST00000532737 C1orf194Q5T5A4 169 aa18.5■□□□□ 0.55
USP48-214ENST00000532737 MIC13Q5XKP0 118 aa18.5■□□□□ 0.55
USP48-214ENST00000532737 PATE2Q6UY27 113 aa18.5■□□□□ 0.55
USP48-214ENST00000532737 STXBP6Q8NFX7 210 aa18.5■□□□□ 0.55
USP48-214ENST00000532737 SMIM3Q9BZL3 60 aa18.5■□□□□ 0.55
USP48-214ENST00000532737 ARL6Q9H0F7 186 aa18.5■□□□□ 0.55
USP48-214ENST00000532737 UBQLN2Q9UHD9 624 aa18.5■□□□□ 0.55
USP48-214ENST00000532737 G3V3Q6 166 aa18.49■□□□□ 0.55
USP48-214ENST00000532737 DNASE2O00115 360 aaPredicted RBP18.49■□□□□ 0.55
USP48-214ENST00000532737 OR5G3P0C626 314 aa18.49■□□□□ 0.55
USP48-214ENST00000532737 PRR20EP86478 221 aa18.49■□□□□ 0.55
USP48-214ENST00000532737 PRR20CP86479 221 aa18.49■□□□□ 0.55
USP48-214ENST00000532737 PRR20DP86480 221 aa18.49■□□□□ 0.55
USP48-214ENST00000532737 PRR20BP86481 221 aa18.49■□□□□ 0.55
USP48-214ENST00000532737 PRR20AP86496 221 aa18.49■□□□□ 0.55
USP48-214ENST00000532737 ODF3L2Q3SX64 289 aa18.49■□□□□ 0.55
USP48-214ENST00000532737 SIGLEC15Q6ZMC9 328 aa18.49■□□□□ 0.55
USP48-214ENST00000532737 Q6ZNX1 250 aa18.49■□□□□ 0.55
USP48-214ENST00000532737 HIGD1AQ9Y241 93 aa18.49■□□□□ 0.55
USP48-214ENST00000532737 TRAV2A0A0B4J234 112 aa18.48■□□□□ 0.55
USP48-214ENST00000532737 ZNF98A6NK75 572 aa18.48■□□□□ 0.55
USP48-214ENST00000532737 A8MZ25 164 aa18.48■□□□□ 0.55
USP48-214ENST00000532737 FRMD6-AS1P0C7T7 363 aa18.48■□□□□ 0.55
USP48-214ENST00000532737 AP2S1P53680 142 aaPredicted RBP18.48■□□□□ 0.55
USP48-214ENST00000532737 OPCMLQ14982 345 aa18.48■□□□□ 0.55
USP48-214ENST00000532737 UHRF2Q96PU4 802 aa18.48■□□□□ 0.55
USP48-214ENST00000532737 ATP5SQ99766 215 aa18.48■□□□□ 0.55
USP48-214ENST00000532737 SCRT1Q9BWW7 348 aa18.48■□□□□ 0.55
USP48-214ENST00000532737 SLC25A39Q9BZJ4 359 aaPredicted RBP18.48■□□□□ 0.55
USP48-214ENST00000532737 K7EQG2 157 aa18.47■□□□□ 0.55
USP48-214ENST00000532737 MPDU1O75352 247 aa18.47■□□□□ 0.55
USP48-214ENST00000532737 RPL29P47914 159 aaKnown RBP18.47■□□□□ 0.55
USP48-214ENST00000532737 PXDC1Q5TGL8 231 aa18.47■□□□□ 0.55
USP48-214ENST00000532737 OR8I2Q8N0Y5 310 aa18.47■□□□□ 0.55
USP48-214ENST00000532737 FAM24BQ8N5W8 94 aa18.47■□□□□ 0.55
USP48-214ENST00000532737 B9D2Q9BPU9 175 aa18.47■□□□□ 0.55
USP48-214ENST00000532737 SHANK2-AS3Q9BTD1 123 aa18.47■□□□□ 0.55
USP48-214ENST00000532737 WDR61Q9GZS3 305 aaKnown RBP18.47■□□□□ 0.55
USP48-214ENST00000532737 TUBA4BQ9H853 241 aa18.47■□□□□ 0.55
USP48-214ENST00000532737 SLC25A22Q9H936 323 aa18.47■□□□□ 0.55
USP48-214ENST00000532737 WFDC1Q9HC57 220 aa18.47■□□□□ 0.55
USP48-214ENST00000532737 H3BRN7 92 aa18.46■□□□□ 0.55
USP48-214ENST00000532737 LEMD1Q68G75 181 aa18.46■□□□□ 0.55
USP48-214ENST00000532737 DCANP1Q8TF63 244 aa18.46■□□□□ 0.55
USP48-214ENST00000532737 AQP10Q96PS8 301 aa18.46■□□□□ 0.55
USP48-214ENST00000532737 NPCDR1Q9BY65 106 aa18.46■□□□□ 0.55
USP48-214ENST00000532737 ARV1Q9H2C2 271 aa18.46■□□□□ 0.55
USP48-214ENST00000532737 FBXL17Q9UF56 701 aa18.46■□□□□ 0.55
USP48-214ENST00000532737 NBEAL2Q6ZNJ1 2754 aa18.45■□□□□ 0.54
USP48-214ENST00000532737 SMLR1H3BR10 107 aa18.45■□□□□ 0.54
USP48-214ENST00000532737 TMEM37Q8WXS4 190 aa18.45■□□□□ 0.54
USP48-214ENST00000532737 CITED4Q96RK1 184 aa18.45■□□□□ 0.54
USP48-214ENST00000532737 SLC25A32Q9H2D1 315 aa18.45■□□□□ 0.54
USP48-214ENST00000532737 SRD5A3Q9H8P0 318 aa18.45■□□□□ 0.54
USP48-214ENST00000532737 MAP6D1Q9H9H5 199 aa18.45■□□□□ 0.54
USP48-214ENST00000532737 SLC39A9Q9NUM3 307 aa18.45■□□□□ 0.54
USP48-214ENST00000532737 PXMP4Q9Y6I8 212 aa18.45■□□□□ 0.54
USP48-214ENST00000532737 FXYD6-FXYD2A0A087WZ82 144 aa18.44■□□□□ 0.54
USP48-214ENST00000532737 S100A7P31151 101 aa18.44■□□□□ 0.54
USP48-214ENST00000532737 B2MP61769 119 aa18.44■□□□□ 0.54
USP48-214ENST00000532737 Q6ZRG5 221 aa18.44■□□□□ 0.54
USP48-214ENST00000532737 ASCL2Q99929 193 aa18.44■□□□□ 0.54
USP48-214ENST00000532737 FAM110AQ9BQ89 295 aa18.44■□□□□ 0.54
USP48-214ENST00000532737 NRN1Q9NPD7 142 aa18.44■□□□□ 0.54
USP48-214ENST00000532737 COX7A2P2O60397 106 aa18.43■□□□□ 0.54
USP48-214ENST00000532737 CMC4P56277 68 aaPredicted RBP18.43■□□□□ 0.54
USP48-214ENST00000532737 DNAJC4Q9NNZ3 241 aa18.43■□□□□ 0.54
USP48-214ENST00000532737 TNFSF18Q9UNG2 199 aa18.43■□□□□ 0.54
USP48-214ENST00000532737 ELOA3CA0A087WX78 387 aaPredicted RBP18.42■□□□□ 0.54
USP48-214ENST00000532737 RBMY1BA6NDE4 496 aaKnown RBP18.42■□□□□ 0.54
USP48-214ENST00000532737 RBMY1EA6NEQ0 496 aaKnown RBP18.42■□□□□ 0.54
USP48-214ENST00000532737 IFNA5P01569 189 aa18.42■□□□□ 0.54
USP48-214ENST00000532737 RBMY1DP0C7P1 496 aaKnown RBP18.42■□□□□ 0.54
USP48-214ENST00000532737 ZNF124Q15973 351 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms