RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 PRR31Q5SQ13 230 aa9.53□□□□□ -0.88
COPB1-208ENST00000532088 UNQ9165/PRO28630Q6UXU0 137 aa9.53□□□□□ -0.88
COPB1-208ENST00000532088 C9orf62Q8N4C0 152 aa9.53□□□□□ -0.88
COPB1-208ENST00000532088 GNPNAT1Q96EK6 184 aaPredicted RBP9.53□□□□□ -0.88
COPB1-208ENST00000532088 PSMG3Q9BT73 122 aaPredicted RBP9.53□□□□□ -0.88
COPB1-208ENST00000532088 MCRIP2Q9BUT9 160 aaKnown RBP9.53□□□□□ -0.88
COPB1-208ENST00000532088 ELOVL1Q9BW60 279 aa9.53□□□□□ -0.88
COPB1-208ENST00000532088 RNF24Q9Y225 148 aa9.53□□□□□ -0.88
COPB1-208ENST00000532088 TMEM213A2RRL7 107 aa9.52□□□□□ -0.89
COPB1-208ENST00000532088 YIF1AO95070 293 aa9.52□□□□□ -0.89
COPB1-208ENST00000532088 IL4P05112 153 aa9.52□□□□□ -0.89
COPB1-208ENST00000532088 LINC00869P0C866 280 aa9.52□□□□□ -0.89
COPB1-208ENST00000532088 CRYBB3P26998 211 aa9.52□□□□□ -0.89
COPB1-208ENST00000532088 INSL3P51460 131 aa9.52□□□□□ -0.89
COPB1-208ENST00000532088 B2MP61769 119 aa9.52□□□□□ -0.89
COPB1-208ENST00000532088 SUMO1P63165 101 aaKnown RBP9.52□□□□□ -0.89
COPB1-208ENST00000532088 RPL7L1Q6DKI1 246 aaKnown RBP9.52□□□□□ -0.89
COPB1-208ENST00000532088 TMEM182Q6ZP80 229 aaPredicted RBP9.52□□□□□ -0.89
COPB1-208ENST00000532088 Q6ZRG5 221 aa9.52□□□□□ -0.89
COPB1-208ENST00000532088 STPG3Q8N7X2 389 aa9.52□□□□□ -0.89
COPB1-208ENST00000532088 OR1L4Q8NGR5 311 aa9.52□□□□□ -0.89
COPB1-208ENST00000532088 OR2G3Q8NGZ4 309 aa9.52□□□□□ -0.89
COPB1-208ENST00000532088 STOML3Q8TAV4 291 aa9.52□□□□□ -0.89
COPB1-208ENST00000532088 METTL26Q96S19 204 aa9.52□□□□□ -0.89
COPB1-208ENST00000532088 KRTAP4-8Q9BYQ9 185 aa9.52□□□□□ -0.89
COPB1-208ENST00000532088 GPR61Q9BZJ8 451 aa9.52□□□□□ -0.89
COPB1-208ENST00000532088 MRPL27Q9P0M9 148 aaKnown RBP9.52□□□□□ -0.89
COPB1-208ENST00000532088 PXMP4Q9Y6I8 212 aa9.52□□□□□ -0.89
COPB1-208ENST00000532088 TENM1Q9UKZ4 2725 aa9.52□□□□□ -0.89
COPB1-208ENST00000532088 IGHV3-35A0A0C4DH35 117 aa9.51□□□□□ -0.89
COPB1-208ENST00000532088 A0A1W2PS18 150 aa9.51□□□□□ -0.89
COPB1-208ENST00000532088 ZNF320A2RRD8 509 aa9.51□□□□□ -0.89
COPB1-208ENST00000532088 C2orf70A6NJV1 201 aa9.51□□□□□ -0.89
COPB1-208ENST00000532088 HNRNPCP07910 306 aaKnown RBP eCLIP9.51□□□□□ -0.89
COPB1-208ENST00000532088 NPPCP23582 126 aa9.51□□□□□ -0.89
COPB1-208ENST00000532088 SERF2P84101 59 aa9.51□□□□□ -0.89
COPB1-208ENST00000532088 USF2Q15853 346 aaPredicted RBP9.51□□□□□ -0.89
COPB1-208ENST00000532088 LAMTOR1Q6IAA8 161 aa9.51□□□□□ -0.89
COPB1-208ENST00000532088 IL34Q6ZMJ4 242 aa9.51□□□□□ -0.89
COPB1-208ENST00000532088 SLC51BQ86UW2 128 aa9.51□□□□□ -0.89
COPB1-208ENST00000532088 NARS2Q96I59 477 aaKnown RBP9.51□□□□□ -0.89
COPB1-208ENST00000532088 PFDN5Q99471 154 aa9.51□□□□□ -0.89
COPB1-208ENST00000532088 C20orf24Q9BUV8 137 aa9.51□□□□□ -0.89
COPB1-208ENST00000532088 TMEM231Q9H6L2 316 aa9.51□□□□□ -0.89
COPB1-208ENST00000532088 SLC39A9Q9NUM3 307 aa9.51□□□□□ -0.89
COPB1-208ENST00000532088 RABAC1Q9UI14 185 aa9.51□□□□□ -0.89
COPB1-208ENST00000532088 IGHV7-4-1A0A0J9YVY3 117 aa9.5□□□□□ -0.89
COPB1-208ENST00000532088 HYPMO75409 117 aa9.5□□□□□ -0.89
COPB1-208ENST00000532088 CD5P06127 495 aa9.5□□□□□ -0.89
COPB1-208ENST00000532088 CSN3P07498 182 aa9.5□□□□□ -0.89
COPB1-208ENST00000532088 GATA2P23769 480 aaPredicted RBP9.5□□□□□ -0.89
COPB1-208ENST00000532088 ATP6V0CP27449 155 aa9.5□□□□□ -0.89
COPB1-208ENST00000532088 LYZP61626 148 aa9.5□□□□□ -0.89
COPB1-208ENST00000532088 MIC13Q5XKP0 118 aa9.5□□□□□ -0.89
COPB1-208ENST00000532088 GATAD1Q8WUU5 269 aa9.5□□□□□ -0.89
COPB1-208ENST00000532088 RNF2Q99496 336 aa9.5□□□□□ -0.89
COPB1-208ENST00000532088 RSG1Q9BU20 258 aa9.5□□□□□ -0.89
COPB1-208ENST00000532088 ZNF471Q9BX82 626 aaPredicted RBP9.5□□□□□ -0.89
COPB1-208ENST00000532088 TECRQ9NZ01 308 aaKnown RBP9.5□□□□□ -0.89
COPB1-208ENST00000532088 MBP02144 154 aa9.49□□□□□ -0.89
COPB1-208ENST00000532088 SEC11BP0C7V7 166 aa9.49□□□□□ -0.89
COPB1-208ENST00000532088 TPT1P13693 172 aaKnown RBP9.49□□□□□ -0.89
COPB1-208ENST00000532088 FOLR2P14207 255 aa9.49□□□□□ -0.89
COPB1-208ENST00000532088 CBLN1P23435 193 aa9.49□□□□□ -0.89
COPB1-208ENST00000532088 RPL11P62913 178 aaKnown RBP9.49□□□□□ -0.89
COPB1-208ENST00000532088 TM4SF20Q53R12 229 aa9.49□□□□□ -0.89
COPB1-208ENST00000532088 C1orf194Q5T5A4 169 aa9.49□□□□□ -0.89
COPB1-208ENST00000532088 C9orf66Q5T8R8 295 aa9.49□□□□□ -0.89
COPB1-208ENST00000532088 BAP18Q8IXM2 172 aa9.49□□□□□ -0.89
COPB1-208ENST00000532088 Q8N1Y9 231 aa9.49□□□□□ -0.89
COPB1-208ENST00000532088 HSD17B11Q8NBQ5 300 aa9.49□□□□□ -0.89
COPB1-208ENST00000532088 OR2K2Q8NGT1 345 aa9.49□□□□□ -0.89
COPB1-208ENST00000532088 VSIRQ9H7M9 311 aa9.49□□□□□ -0.89
COPB1-208ENST00000532088 DNAJC4Q9NNZ3 241 aa9.49□□□□□ -0.89
COPB1-208ENST00000532088 SMPXQ9UHP9 88 aa9.49□□□□□ -0.89
COPB1-208ENST00000532088 HIGD1AQ9Y241 93 aa9.49□□□□□ -0.89
COPB1-208ENST00000532088 STAB1Q9NY15 2570 aa9.49□□□□□ -0.89
COPB1-208ENST00000532088 COX7A2P2O60397 106 aa9.48□□□□□ -0.89
COPB1-208ENST00000532088 SPP1P10451 314 aa9.48□□□□□ -0.89
COPB1-208ENST00000532088 ORM2P19652 201 aa9.48□□□□□ -0.89
COPB1-208ENST00000532088 ACOT6Q3I5F7 207 aaPredicted RBP9.48□□□□□ -0.89
COPB1-208ENST00000532088 EIF5AL1Q6IS14 154 aaKnown RBP9.48□□□□□ -0.89
COPB1-208ENST00000532088 OR1B1Q8NGR6 318 aa9.48□□□□□ -0.89
COPB1-208ENST00000532088 GRAMD2BQ96HH9 432 aa9.48□□□□□ -0.89
COPB1-208ENST00000532088 PBDC1Q9BVG4 233 aa9.48□□□□□ -0.89
COPB1-208ENST00000532088 SEC14L6B5MCN3 397 aa9.47□□□□□ -0.89
COPB1-208ENST00000532088 H3BRN7 92 aa9.47□□□□□ -0.89
COPB1-208ENST00000532088 CHEK1O14757 476 aa9.47□□□□□ -0.89
COPB1-208ENST00000532088 BUB3O43684 328 aa9.47□□□□□ -0.89
COPB1-208ENST00000532088 OR5G3P0C626 314 aa9.47□□□□□ -0.89
COPB1-208ENST00000532088 M6PRP20645 277 aa9.47□□□□□ -0.89
COPB1-208ENST00000532088 NKX2-5P52952 324 aaPredicted RBP9.47□□□□□ -0.89
COPB1-208ENST00000532088 FFAR4Q5NUL3 377 aa9.47□□□□□ -0.89
COPB1-208ENST00000532088 C10orf113Q5VZT2 155 aa9.47□□□□□ -0.89
COPB1-208ENST00000532088 ADAMTSL5Q6ZMM2 481 aa9.47□□□□□ -0.89
COPB1-208ENST00000532088 TMEM37Q8WXS4 190 aa9.47□□□□□ -0.89
COPB1-208ENST00000532088 GPR82Q96P67 336 aa9.47□□□□□ -0.89
COPB1-208ENST00000532088 SHANK2-AS3Q9BTD1 123 aa9.47□□□□□ -0.89
COPB1-208ENST00000532088 RHPN1-AS1Q9BWJ2 59 aa9.47□□□□□ -0.89
COPB1-208ENST00000532088 MRPL32Q9BYC8 188 aaKnown RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms