RNA–Protein interactions for RNA: ENST00000531542.1

AMBRA1-210, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-210ENST00000531542 RPP30P78346 268 aaKnown RBP9.56□□□□□ -0.88
AMBRA1-210ENST00000531542 ZNF79Q15937 498 aa9.56□□□□□ -0.88
AMBRA1-210ENST00000531542 GGNBP1Q5YKI7 109 aa9.56□□□□□ -0.88
AMBRA1-210ENST00000531542 LINC00336Q6ZUF6 198 aa9.56□□□□□ -0.88
AMBRA1-210ENST00000531542 FAM210BQ96KR6 192 aa9.56□□□□□ -0.88
AMBRA1-210ENST00000531542 WDR12Q9GZL7 423 aaKnown RBP9.56□□□□□ -0.88
AMBRA1-210ENST00000531542 IGKV1OR2-108A0A075B7D4 117 aa9.55□□□□□ -0.88
AMBRA1-210ENST00000531542 PRSS46E5RG02 174 aa9.55□□□□□ -0.88
AMBRA1-210ENST00000531542 SPART-AS1P0CW21 52 aa9.55□□□□□ -0.88
AMBRA1-210ENST00000531542 P0DMU3 169 aa9.55□□□□□ -0.88
AMBRA1-210ENST00000531542 FAM231AP0DMU4 169 aa9.55□□□□□ -0.88
AMBRA1-210ENST00000531542 FAM231CP0DMU5 169 aa9.55□□□□□ -0.88
AMBRA1-210ENST00000531542 GDF5OSQ5U4N7 250 aa9.55□□□□□ -0.88
AMBRA1-210ENST00000531542 TOMM5Q8N4H5 51 aa9.55□□□□□ -0.88
AMBRA1-210ENST00000531542 ZNF709Q8N972 641 aa9.55□□□□□ -0.88
AMBRA1-210ENST00000531542 OR4D5Q8NGN0 318 aa9.55□□□□□ -0.88
AMBRA1-210ENST00000531542 A8MTW9 85 aa9.54□□□□□ -0.88
AMBRA1-210ENST00000531542 S100A7P31151 101 aa9.54□□□□□ -0.88
AMBRA1-210ENST00000531542 LYZP61626 148 aa9.54□□□□□ -0.88
AMBRA1-210ENST00000531542 OXA1LQ15070 435 aa9.54□□□□□ -0.88
AMBRA1-210ENST00000531542 TMED4Q7Z7H5 227 aa9.54□□□□□ -0.88
AMBRA1-210ENST00000531542 OR8I2Q8N0Y5 310 aa9.54□□□□□ -0.88
AMBRA1-210ENST00000531542 POM121L12Q8N7R1 296 aa9.54□□□□□ -0.88
AMBRA1-210ENST00000531542 NDUFAF3Q9BU61 184 aa9.54□□□□□ -0.88
AMBRA1-210ENST00000531542 RFNGQ9Y644 331 aa9.54□□□□□ -0.88
AMBRA1-210ENST00000531542 V9GYH0 126 aa9.54□□□□□ -0.88
AMBRA1-210ENST00000531542 HERC2O95714 4834 aa9.54□□□□□ -0.88
AMBRA1-210ENST00000531542 SYNGR2O43760 224 aa9.53□□□□□ -0.88
AMBRA1-210ENST00000531542 SFT2D2O95562 160 aa9.53□□□□□ -0.88
AMBRA1-210ENST00000531542 UBE2MP61081 183 aaKnown RBP9.53□□□□□ -0.88
AMBRA1-210ENST00000531542 PSG9Q00887 426 aa9.53□□□□□ -0.88
AMBRA1-210ENST00000531542 EBLN2Q6P2I7 272 aa9.53□□□□□ -0.88
AMBRA1-210ENST00000531542 COQ8AQ8NI60 647 aa9.53□□□□□ -0.88
AMBRA1-210ENST00000531542 LINC00052Q96N35 136 aa9.53□□□□□ -0.88
AMBRA1-210ENST00000531542 GPR82Q96P67 336 aa9.53□□□□□ -0.88
AMBRA1-210ENST00000531542 A0A0J9YX75 114 aa9.52□□□□□ -0.89
AMBRA1-210ENST00000531542 IAPPP10997 89 aa9.52□□□□□ -0.89
AMBRA1-210ENST00000531542 VAMP1P23763 118 aa9.52□□□□□ -0.89
AMBRA1-210ENST00000531542 GALR1P47211 349 aa9.52□□□□□ -0.89
AMBRA1-210ENST00000531542 PYDC2Q56P42 97 aa9.52□□□□□ -0.89
AMBRA1-210ENST00000531542 RPRMQ9NS64 109 aa9.52□□□□□ -0.89
AMBRA1-210ENST00000531542 DKK2Q9UBU2 259 aa9.52□□□□□ -0.89
AMBRA1-210ENST00000531542 ZNF98A6NK75 572 aa9.51□□□□□ -0.89
AMBRA1-210ENST00000531542 ID3Q02535 119 aa9.51□□□□□ -0.89
AMBRA1-210ENST00000531542 PPP1R1AQ13522 171 aa9.51□□□□□ -0.89
AMBRA1-210ENST00000531542 OR2F1Q13607 317 aa9.51□□□□□ -0.89
AMBRA1-210ENST00000531542 FAM78BQ5VT40 261 aa9.51□□□□□ -0.89
AMBRA1-210ENST00000531542 CCDC190Q86UF4 302 aa9.51□□□□□ -0.89
AMBRA1-210ENST00000531542 BPIFCQ8NFQ6 507 aa9.51□□□□□ -0.89
AMBRA1-210ENST00000531542 OR1B1Q8NGR6 318 aa9.51□□□□□ -0.89
AMBRA1-210ENST00000531542 PPP1R14BQ96C90 147 aa9.51□□□□□ -0.89
AMBRA1-210ENST00000531542 C17orf77Q96MU5 243 aa9.51□□□□□ -0.89
AMBRA1-210ENST00000531542 GOLT1BQ9Y3E0 138 aa9.51□□□□□ -0.89
AMBRA1-210ENST00000531542 IGKV3-20P01619 116 aa9.5□□□□□ -0.89
AMBRA1-210ENST00000531542 S100A5P33763 92 aa9.5□□□□□ -0.89
AMBRA1-210ENST00000531542 DEFB1P60022 68 aa9.5□□□□□ -0.89
AMBRA1-210ENST00000531542 LGALS9BQ3B8N2 356 aa9.5□□□□□ -0.89
AMBRA1-210ENST00000531542 ZNF767PQ75MW2 155 aa9.5□□□□□ -0.89
AMBRA1-210ENST00000531542 TMEM144Q7Z5S9 345 aa9.5□□□□□ -0.89
AMBRA1-210ENST00000531542 C1orf158Q8N1D5 194 aa9.5□□□□□ -0.89
AMBRA1-210ENST00000531542 OR4B1Q8NGF8 309 aa9.5□□□□□ -0.89
AMBRA1-210ENST00000531542 NIPSNAP3BQ9BS92 247 aa9.5□□□□□ -0.89
AMBRA1-210ENST00000531542 SLC35B3Q9H1N7 401 aa9.5□□□□□ -0.89
AMBRA1-210ENST00000531542 SLC25A32Q9H2D1 315 aa9.5□□□□□ -0.89
AMBRA1-210ENST00000531542 DOK5Q9P104 306 aa9.5□□□□□ -0.89
AMBRA1-210ENST00000531542 WRBO00258 174 aa9.49□□□□□ -0.89
AMBRA1-210ENST00000531542 HBE1P02100 147 aa9.49□□□□□ -0.89
AMBRA1-210ENST00000531542 FAM222AQ5U5X8 452 aa9.49□□□□□ -0.89
AMBRA1-210ENST00000531542 AMTNQ6UX39 209 aa9.49□□□□□ -0.89
AMBRA1-210ENST00000531542 C16orf92Q96LL3 132 aa9.49□□□□□ -0.89
AMBRA1-210ENST00000531542 IGF2BP2-AS1Q96M15 143 aa9.49□□□□□ -0.89
AMBRA1-210ENST00000531542 RSG1Q9BU20 258 aa9.49□□□□□ -0.89
AMBRA1-210ENST00000531542 SCRT1Q9BWW7 348 aa9.49□□□□□ -0.89
AMBRA1-210ENST00000531542 MAGT1Q9H0U3 335 aa9.49□□□□□ -0.89
AMBRA1-210ENST00000531542 STRAPQ9Y3F4 350 aaKnown RBP9.49□□□□□ -0.89
AMBRA1-210ENST00000531542 A0A1B0GVY2 172 aa9.48□□□□□ -0.89
AMBRA1-210ENST00000531542 NAP1L6A6NFF2 107 aa9.48□□□□□ -0.89
AMBRA1-210ENST00000531542 F6UB75 175 aa9.48□□□□□ -0.89
AMBRA1-210ENST00000531542 ZNF701M0R085 212 aaPredicted RBP9.48□□□□□ -0.89
AMBRA1-210ENST00000531542 DUSP14O95147 198 aaKnown RBP9.48□□□□□ -0.89
AMBRA1-210ENST00000531542 HOXB5P09067 269 aa9.48□□□□□ -0.89
AMBRA1-210ENST00000531542 EMP1P54849 157 aa9.48□□□□□ -0.89
AMBRA1-210ENST00000531542 FXYD7P58549 80 aa9.48□□□□□ -0.89
AMBRA1-210ENST00000531542 PLP1P60201 277 aa9.48□□□□□ -0.89
AMBRA1-210ENST00000531542 B2MP61769 119 aa9.48□□□□□ -0.89
AMBRA1-210ENST00000531542 SELENOTP62341 195 aa9.48□□□□□ -0.89
AMBRA1-210ENST00000531542 RRN3P1Q2M238 152 aa9.48□□□□□ -0.89
AMBRA1-210ENST00000531542 RNF212Q495C1 297 aa9.48□□□□□ -0.89
AMBRA1-210ENST00000531542 SPANXN5Q5MJ07 72 aa9.48□□□□□ -0.89
AMBRA1-210ENST00000531542 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.48□□□□□ -0.89
AMBRA1-210ENST00000531542 C20orf173Q96LM9 149 aa9.48□□□□□ -0.89
AMBRA1-210ENST00000531542 TMEM147Q9BVK8 224 aa9.48□□□□□ -0.89
AMBRA1-210ENST00000531542 KRTAP17-1Q9BYP8 105 aa9.48□□□□□ -0.89
AMBRA1-210ENST00000531542 PAIP2BQ9ULR5 123 aaKnown RBP9.48□□□□□ -0.89
AMBRA1-210ENST00000531542 IGHV3OR16-12A0A075B7B8 117 aa9.47□□□□□ -0.89
AMBRA1-210ENST00000531542 LOC102723971A0A1B0GUV8 181 aa9.47□□□□□ -0.89
AMBRA1-210ENST00000531542 C9orf170A2RU37 121 aa9.47□□□□□ -0.89
AMBRA1-210ENST00000531542 FNDC10F2Z333 226 aa9.47□□□□□ -0.89
AMBRA1-210ENST00000531542 K7EPK0 472 aa9.47□□□□□ -0.89
AMBRA1-210ENST00000531542 NDUFB6O95139 128 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 221.5 ms