RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 DKK2Q9UBU2 259 aa11.29□□□□□ -0.6
CHMP4A-204ENST00000530996 SHPKQ9UHJ6 478 aa11.29□□□□□ -0.6
CHMP4A-204ENST00000530996 YTHDF2Q9Y5A9 579 aaKnown RBP11.29□□□□□ -0.6
CHMP4A-204ENST00000530996 ISLRO14498 428 aa11.28□□□□□ -0.6
CHMP4A-204ENST00000530996 IAPPP10997 89 aa11.28□□□□□ -0.6
CHMP4A-204ENST00000530996 DAD1P61803 113 aa11.28□□□□□ -0.6
CHMP4A-204ENST00000530996 SPCS2Q15005 226 aa11.28□□□□□ -0.6
CHMP4A-204ENST00000530996 RRN3P1Q2M238 152 aa11.28□□□□□ -0.6
CHMP4A-204ENST00000530996 LGALS9BQ3B8N2 356 aa11.28□□□□□ -0.6
CHMP4A-204ENST00000530996 C1orf194Q5T5A4 169 aa11.28□□□□□ -0.6
CHMP4A-204ENST00000530996 SPATA31B1PQ5VZV4 182 aa11.28□□□□□ -0.6
CHMP4A-204ENST00000530996 FAM210BQ96KR6 192 aa11.28□□□□□ -0.6
CHMP4A-204ENST00000530996 C16orf92Q96LL3 132 aa11.28□□□□□ -0.6
CHMP4A-204ENST00000530996 MAGT1Q9H0U3 335 aa11.28□□□□□ -0.6
CHMP4A-204ENST00000530996 SLC25A22Q9H936 323 aa11.28□□□□□ -0.6
CHMP4A-204ENST00000530996 RPRMQ9NS64 109 aa11.28□□□□□ -0.6
CHMP4A-204ENST00000530996 PKHD1P08F94 4074 aa11.27□□□□□ -0.6
CHMP4A-204ENST00000530996 IGKV1D-37A0A075B6S9 117 aa11.27□□□□□ -0.61
CHMP4A-204ENST00000530996 SNRPGP15A8MWD9 76 aa11.27□□□□□ -0.61
CHMP4A-204ENST00000530996 SOCS3O14543 225 aa11.27□□□□□ -0.61
CHMP4A-204ENST00000530996 GALR1P47211 349 aa11.27□□□□□ -0.61
CHMP4A-204ENST00000530996 RAB11AP62491 216 aa11.27□□□□□ -0.61
CHMP4A-204ENST00000530996 ZNF79Q15937 498 aa11.27□□□□□ -0.61
CHMP4A-204ENST00000530996 SAMD13Q5VXD3 122 aa11.27□□□□□ -0.61
CHMP4A-204ENST00000530996 PLA2G2EQ9NZK7 142 aa11.27□□□□□ -0.61
CHMP4A-204ENST00000530996 TMED3Q9Y3Q3 217 aa11.27□□□□□ -0.61
CHMP4A-204ENST00000530996 ANKRD20A5PA0PJZ0 165 aa11.26□□□□□ -0.61
CHMP4A-204ENST00000530996 CTDSPLO15194 276 aa11.26□□□□□ -0.61
CHMP4A-204ENST00000530996 GPX4P36969 197 aaPredicted RBP11.26□□□□□ -0.61
CHMP4A-204ENST00000530996 MEOX2P50222 304 aa11.26□□□□□ -0.61
CHMP4A-204ENST00000530996 TMEM88Q6PEY1 159 aa11.26□□□□□ -0.61
CHMP4A-204ENST00000530996 TMED4Q7Z7H5 227 aa11.26□□□□□ -0.61
CHMP4A-204ENST00000530996 DOK5Q9P104 306 aa11.26□□□□□ -0.61
CHMP4A-204ENST00000530996 RABL2AQ9UBK7 228 aaPredicted RBP11.26□□□□□ -0.61
CHMP4A-204ENST00000530996 RABL2BQ9UNT1 228 aa11.26□□□□□ -0.61
CHMP4A-204ENST00000530996 A0A0J9YX75 114 aa11.25□□□□□ -0.61
CHMP4A-204ENST00000530996 PAX9P55771 341 aa11.25□□□□□ -0.61
CHMP4A-204ENST00000530996 ATP5IP56385 69 aaPredicted RBP11.25□□□□□ -0.61
CHMP4A-204ENST00000530996 CLUHP3Q96NS8 147 aa11.25□□□□□ -0.61
CHMP4A-204ENST00000530996 TRGV9Q99603 122 aa11.25□□□□□ -0.61
CHMP4A-204ENST00000530996 ATG101Q9BSB4 218 aa11.25□□□□□ -0.61
CHMP4A-204ENST00000530996 MRPS26Q9BYN8 205 aaKnown RBP11.25□□□□□ -0.61
CHMP4A-204ENST00000530996 PIGBOS1A0A0B4J2F0 54 aa11.24□□□□□ -0.61
CHMP4A-204ENST00000530996 INSP01308 110 aa11.24□□□□□ -0.61
CHMP4A-204ENST00000530996 VAMP1P23763 118 aa11.24□□□□□ -0.61
CHMP4A-204ENST00000530996 AKR1C1Q04828 323 aa11.24□□□□□ -0.61
CHMP4A-204ENST00000530996 C1orf158Q8N1D5 194 aa11.24□□□□□ -0.61
CHMP4A-204ENST00000530996 SLC25A32Q9H2D1 315 aa11.24□□□□□ -0.61
CHMP4A-204ENST00000530996 CCDC59Q9P031 241 aaKnown RBP11.24□□□□□ -0.61
CHMP4A-204ENST00000530996 RSL24D1Q9UHA3 163 aaKnown RBP11.24□□□□□ -0.61
CHMP4A-204ENST00000530996 NOL3O60936 208 aaKnown RBP11.23□□□□□ -0.61
CHMP4A-204ENST00000530996 FAUP35544 74 aaKnown RBP11.23□□□□□ -0.61
CHMP4A-204ENST00000530996 FGL1Q08830 312 aa11.23□□□□□ -0.61
CHMP4A-204ENST00000530996 OXA1LQ15070 435 aa11.23□□□□□ -0.61
CHMP4A-204ENST00000530996 C1orf134Q5TEV5 83 aa11.23□□□□□ -0.61
CHMP4A-204ENST00000530996 ZNF575Q86XF7 245 aa11.23□□□□□ -0.61
CHMP4A-204ENST00000530996 C20orf173Q96LM9 149 aa11.23□□□□□ -0.61
CHMP4A-204ENST00000530996 RSG1Q9BU20 258 aa11.23□□□□□ -0.61
CHMP4A-204ENST00000530996 FAT2Q9NYQ8 4349 aa11.23□□□□□ -0.61
CHMP4A-204ENST00000530996 DUXBA0A1W2PPF3 345 aa11.22□□□□□ -0.61
CHMP4A-204ENST00000530996 M0R2Z0 102 aa11.22□□□□□ -0.61
CHMP4A-204ENST00000530996 MED6O75586 246 aa11.22□□□□□ -0.61
CHMP4A-204ENST00000530996 ORM2P19652 201 aa11.22□□□□□ -0.61
CHMP4A-204ENST00000530996 RPP30P78346 268 aaKnown RBP11.22□□□□□ -0.61
CHMP4A-204ENST00000530996 RNF212Q495C1 297 aa11.22□□□□□ -0.61
CHMP4A-204ENST00000530996 GGNBP1Q5YKI7 109 aa11.22□□□□□ -0.61
CHMP4A-204ENST00000530996 Q6ZR54 194 aa11.22□□□□□ -0.61
CHMP4A-204ENST00000530996 C15orf53Q8NAA6 179 aa11.22□□□□□ -0.61
CHMP4A-204ENST00000530996 BPIFCQ8NFQ6 507 aa11.22□□□□□ -0.61
CHMP4A-204ENST00000530996 OR1B1Q8NGR6 318 aa11.22□□□□□ -0.61
CHMP4A-204ENST00000530996 IGF2BP2-AS1Q96M15 143 aa11.22□□□□□ -0.61
CHMP4A-204ENST00000530996 TMEM147Q9BVK8 224 aa11.22□□□□□ -0.61
CHMP4A-204ENST00000530996 DNAH2Q9P225 4427 aa11.22□□□□□ -0.61
CHMP4A-204ENST00000530996 IGKV1OR2-108A0A075B7D4 117 aa11.21□□□□□ -0.61
CHMP4A-204ENST00000530996 SMCO3A2RU48 225 aa11.21□□□□□ -0.61
CHMP4A-204ENST00000530996 CFDP00746 253 aaPredicted RBP11.21□□□□□ -0.61
CHMP4A-204ENST00000530996 DEFB130BP0DP73 79 aa11.21□□□□□ -0.61
CHMP4A-204ENST00000530996 DEFB130AP0DP74 79 aa11.21□□□□□ -0.61
CHMP4A-204ENST00000530996 S100A7P31151 101 aa11.21□□□□□ -0.61
CHMP4A-204ENST00000530996 SPINK13Q1W4C9 94 aa11.21□□□□□ -0.61
CHMP4A-204ENST00000530996 BAP18Q8IXM2 172 aa11.21□□□□□ -0.61
CHMP4A-204ENST00000530996 THAP8Q8NA92 274 aa11.21□□□□□ -0.61
CHMP4A-204ENST00000530996 ZNF738Q8NE65 137 aa11.21□□□□□ -0.61
CHMP4A-204ENST00000530996 RAB2BQ8WUD1 216 aa11.21□□□□□ -0.61
CHMP4A-204ENST00000530996 CIB3Q96Q77 187 aaPredicted RBP11.21□□□□□ -0.61
CHMP4A-204ENST00000530996 ZNF98A6NK75 572 aa11.2□□□□□ -0.62
CHMP4A-204ENST00000530996 ZNF705GA8MUZ8 300 aaPredicted RBP11.2□□□□□ -0.62
CHMP4A-204ENST00000530996 H3BP45 60 aa11.2□□□□□ -0.62
CHMP4A-204ENST00000530996 WRBO00258 174 aa11.2□□□□□ -0.62
CHMP4A-204ENST00000530996 DUSP14O95147 198 aaKnown RBP11.2□□□□□ -0.62
CHMP4A-204ENST00000530996 CNN1P51911 297 aaKnown RBP11.2□□□□□ -0.62
CHMP4A-204ENST00000530996 RNF182Q8N6D2 247 aa11.2□□□□□ -0.62
CHMP4A-204ENST00000530996 GPR82Q96P67 336 aa11.2□□□□□ -0.62
CHMP4A-204ENST00000530996 FABP12A6NFH5 140 aa11.19□□□□□ -0.62
CHMP4A-204ENST00000530996 GATA2P23769 480 aaPredicted RBP11.19□□□□□ -0.62
CHMP4A-204ENST00000530996 AP3S2P59780 193 aa11.19□□□□□ -0.62
CHMP4A-204ENST00000530996 TMEM128Q5BJH2 165 aa11.19□□□□□ -0.62
CHMP4A-204ENST00000530996 SPANXN5Q5MJ07 72 aa11.19□□□□□ -0.62
CHMP4A-204ENST00000530996 IGFL4Q6B9Z1 124 aa11.19□□□□□ -0.62
CHMP4A-204ENST00000530996 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms