RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 SSX7Q7RTT5 188 aa8.15□□□□□ -1.1
SOX6-213ENST00000530378 FAM213BQ8TBF2 198 aa8.15□□□□□ -1.1
SOX6-213ENST00000530378 TMEM37Q8WXS4 190 aa8.15□□□□□ -1.1
SOX6-213ENST00000530378 CITED1Q99966 193 aa8.15□□□□□ -1.1
SOX6-213ENST00000530378 KCNIP2Q9NS61 270 aa8.15□□□□□ -1.1
SOX6-213ENST00000530378 NOTCH3Q9UM47 2321 aa8.15□□□□□ -1.1
SOX6-213ENST00000530378 TRAV5A0A0B4J249 113 aa8.15□□□□□ -1.11
SOX6-213ENST00000530378 APOHP02749 345 aaPredicted RBP8.15□□□□□ -1.11
SOX6-213ENST00000530378 SNRPCP09234 159 aaKnown RBP8.15□□□□□ -1.11
SOX6-213ENST00000530378 SEC11BP0C7V7 166 aa8.15□□□□□ -1.11
SOX6-213ENST00000530378 LINC01559Q495D7 138 aa8.15□□□□□ -1.11
SOX6-213ENST00000530378 C10orf113Q5VZT2 155 aa8.15□□□□□ -1.11
SOX6-213ENST00000530378 MIR17HGQ75NE6 70 aa8.15□□□□□ -1.11
SOX6-213ENST00000530378 NDUFA11Q86Y39 141 aa8.15□□□□□ -1.11
SOX6-213ENST00000530378 ZNF680Q8NEM1 530 aa8.15□□□□□ -1.11
SOX6-213ENST00000530378 OR10G4Q8NGN3 311 aa8.15□□□□□ -1.11
SOX6-213ENST00000530378 OR10G9Q8NGN4 311 aa8.15□□□□□ -1.11
SOX6-213ENST00000530378 OR10G7Q8NGN6 311 aa8.15□□□□□ -1.11
SOX6-213ENST00000530378 TMEM190Q8WZ59 177 aa8.15□□□□□ -1.11
SOX6-213ENST00000530378 SCRT1Q9BWW7 348 aa8.15□□□□□ -1.11
SOX6-213ENST00000530378 SEPSECSQ9HD40 501 aaKnown RBP8.15□□□□□ -1.11
SOX6-213ENST00000530378 RPRMQ9NS64 109 aa8.15□□□□□ -1.11
SOX6-213ENST00000530378 HIGD1AQ9Y241 93 aa8.15□□□□□ -1.11
SOX6-213ENST00000530378 WI2-2373I1.2A0A1W2PRP0 233 aa8.14□□□□□ -1.11
SOX6-213ENST00000530378 NDUFA4O00483 81 aa8.14□□□□□ -1.11
SOX6-213ENST00000530378 LCE2BO14633 110 aa8.14□□□□□ -1.11
SOX6-213ENST00000530378 HYPMO75409 117 aa8.14□□□□□ -1.11
SOX6-213ENST00000530378 TMEM41BQ5BJD5 291 aa8.14□□□□□ -1.11
SOX6-213ENST00000530378 FAM78BQ5VT40 261 aa8.14□□□□□ -1.11
SOX6-213ENST00000530378 LINC00305Q7Z4B0 112 aa8.14□□□□□ -1.11
SOX6-213ENST00000530378 DLX4Q92988 240 aaPredicted RBP8.14□□□□□ -1.11
SOX6-213ENST00000530378 ATP6V0BQ99437 205 aa8.14□□□□□ -1.11
SOX6-213ENST00000530378 PF4P02776 101 aa8.13□□□□□ -1.11
SOX6-213ENST00000530378 M6PRP20645 277 aa8.13□□□□□ -1.11
SOX6-213ENST00000530378 ZP3P21754 424 aa8.13□□□□□ -1.11
SOX6-213ENST00000530378 FGF8P55075 233 aaPredicted RBP8.13□□□□□ -1.11
SOX6-213ENST00000530378 ZNF726P1Q15940 193 aa8.13□□□□□ -1.11
SOX6-213ENST00000530378 ACOT6Q3I5F7 207 aaPredicted RBP8.13□□□□□ -1.11
SOX6-213ENST00000530378 FAM106AQ4KMX7 169 aa8.13□□□□□ -1.11
SOX6-213ENST00000530378 EIF5AL1Q6IS14 154 aaKnown RBP8.13□□□□□ -1.11
SOX6-213ENST00000530378 RPP25LQ8N5L8 163 aaKnown RBP8.13□□□□□ -1.11
SOX6-213ENST00000530378 RABAC1Q9UI14 185 aa8.13□□□□□ -1.11
SOX6-213ENST00000530378 ZNF705EA8MWA4 302 aaPredicted RBP8.13□□□□□ -1.11
SOX6-213ENST00000530378 TEX46H3BTG2 121 aa8.13□□□□□ -1.11
SOX6-213ENST00000530378 IFNA7P01567 189 aa8.13□□□□□ -1.11
SOX6-213ENST00000530378 CDC34P49427 236 aaPredicted RBP8.13□□□□□ -1.11
SOX6-213ENST00000530378 SERF2P84101 59 aa8.13□□□□□ -1.11
SOX6-213ENST00000530378 FHL3Q13643 280 aa8.13□□□□□ -1.11
SOX6-213ENST00000530378 LCN15Q6UWW0 184 aa8.13□□□□□ -1.11
SOX6-213ENST00000530378 OR1L4Q8NGR5 311 aa8.13□□□□□ -1.11
SOX6-213ENST00000530378 METTL26Q96S19 204 aa8.13□□□□□ -1.11
SOX6-213ENST00000530378 SLC25A39Q9BZJ4 359 aaPredicted RBP8.13□□□□□ -1.11
SOX6-213ENST00000530378 DNAJC4Q9NNZ3 241 aa8.13□□□□□ -1.11
SOX6-213ENST00000530378 UBQLN2Q9UHD9 624 aa8.13□□□□□ -1.11
SOX6-213ENST00000530378 CMYA5Q8N3K9 4069 aa8.12□□□□□ -1.11
SOX6-213ENST00000530378 TMEM213A2RRL7 107 aa8.12□□□□□ -1.11
SOX6-213ENST00000530378 H3BTX0 84 aa8.12□□□□□ -1.11
SOX6-213ENST00000530378 SULT1A2P50226 295 aa8.12□□□□□ -1.11
SOX6-213ENST00000530378 KLF5Q13887 457 aaPredicted RBP8.12□□□□□ -1.11
SOX6-213ENST00000530378 GPHB5Q86YW7 130 aa8.12□□□□□ -1.11
SOX6-213ENST00000530378 C1QL4Q86Z23 238 aa8.12□□□□□ -1.11
SOX6-213ENST00000530378 PHYHIPLQ96FC7 376 aa8.12□□□□□ -1.11
SOX6-213ENST00000530378 PFDN5Q99471 154 aa8.12□□□□□ -1.11
SOX6-213ENST00000530378 ZNF747Q9BV97 191 aa8.12□□□□□ -1.11
SOX6-213ENST00000530378 PKD1L1Q8TDX9 2849 aa8.12□□□□□ -1.11
SOX6-213ENST00000530378 NBEAL1Q6ZS30 2694 aa8.12□□□□□ -1.11
SOX6-213ENST00000530378 A0A1W2PPV4 95 aa8.11□□□□□ -1.11
SOX6-213ENST00000530378 RHOBP62745 196 aa8.11□□□□□ -1.11
SOX6-213ENST00000530378 C4orf48Q5BLP8 95 aa8.11□□□□□ -1.11
SOX6-213ENST00000530378 RAB24Q969Q5 203 aa8.11□□□□□ -1.11
SOX6-213ENST00000530378 DAZ1Q9NQZ3 744 aaKnown RBP8.11□□□□□ -1.11
SOX6-213ENST00000530378 MRPL27Q9P0M9 148 aaKnown RBP8.11□□□□□ -1.11
SOX6-213ENST00000530378 FUT9Q9Y231 359 aa8.11□□□□□ -1.11
SOX6-213ENST00000530378 IGKV3-7A0A075B6H7 116 aa8.1□□□□□ -1.11
SOX6-213ENST00000530378 MAP1LC3B2A6NCE7 125 aa8.1□□□□□ -1.11
SOX6-213ENST00000530378 UMAD1C9J7I0 102 aa8.1□□□□□ -1.11
SOX6-213ENST00000530378 H3BRN7 92 aa8.1□□□□□ -1.11
SOX6-213ENST00000530378 OR7C2O60412 319 aa8.1□□□□□ -1.11
SOX6-213ENST00000530378 MBP02144 154 aa8.1□□□□□ -1.11
SOX6-213ENST00000530378 OR10J4P0C629 311 aa8.1□□□□□ -1.11
SOX6-213ENST00000530378 PYYP10082 97 aa8.1□□□□□ -1.11
SOX6-213ENST00000530378 NPPCP23582 126 aa8.1□□□□□ -1.11
SOX6-213ENST00000530378 PLP1P60201 277 aa8.1□□□□□ -1.11
SOX6-213ENST00000530378 GATAD1Q8WUU5 269 aa8.1□□□□□ -1.11
SOX6-213ENST00000530378 SHANK2-AS3Q9BTD1 123 aa8.1□□□□□ -1.11
SOX6-213ENST00000530378 SLC25A2Q9BXI2 301 aa8.1□□□□□ -1.11
SOX6-213ENST00000530378 ACTR3CQ9C0K3 210 aaPredicted RBP8.1□□□□□ -1.11
SOX6-213ENST00000530378 MAP1LC3BQ9GZQ8 125 aa8.1□□□□□ -1.11
SOX6-213ENST00000530378 UFC1Q9Y3C8 167 aa8.1□□□□□ -1.11
SOX6-213ENST00000530378 ELOA3CA0A087WX78 387 aaPredicted RBP8.1□□□□□ -1.11
SOX6-213ENST00000530378 IGHV7-4-1A0A0J9YVY3 117 aa8.1□□□□□ -1.11
SOX6-213ENST00000530378 C2orf70A6NJV1 201 aa8.1□□□□□ -1.11
SOX6-213ENST00000530378 ZNF98A6NK75 572 aa8.1□□□□□ -1.11
SOX6-213ENST00000530378 ARL14EPLP0DKL9 152 aa8.1□□□□□ -1.11
SOX6-213ENST00000530378 PRB4P10163 310 aaPredicted RBP8.1□□□□□ -1.11
SOX6-213ENST00000530378 REC114Q7Z4M0 266 aa8.1□□□□□ -1.11
SOX6-213ENST00000530378 OR4F17Q8NGA8 305 aa8.1□□□□□ -1.11
SOX6-213ENST00000530378 OR9G4Q8NGQ1 327 aa8.1□□□□□ -1.11
SOX6-213ENST00000530378 SFT2D1Q8WV19 159 aa8.1□□□□□ -1.11
SOX6-213ENST00000530378 RNF141Q8WVD5 230 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms