RNA–Protein interactions for RNA: ENST00000529476.1

USF1-209, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-209ENST00000529476 BMI1P35226 326 aa10.54□□□□□ -0.72
USF1-209ENST00000529476 OPCMLQ14982 345 aa10.54□□□□□ -0.72
USF1-209ENST00000529476 GUCA2BQ16661 112 aa10.54□□□□□ -0.72
USF1-209ENST00000529476 NARS2Q96I59 477 aaKnown RBP10.54□□□□□ -0.72
USF1-209ENST00000529476 PRR25Q96S07 402 aa10.54□□□□□ -0.72
USF1-209ENST00000529476 NPCDR1Q9BY65 106 aa10.54□□□□□ -0.72
USF1-209ENST00000529476 ZMAT5Q9UDW3 170 aaKnown RBP10.54□□□□□ -0.72
USF1-209ENST00000529476 ZNF785A8K8V0 405 aa10.53□□□□□ -0.72
USF1-209ENST00000529476 HYPMO75409 117 aa10.53□□□□□ -0.72
USF1-209ENST00000529476 IFNA5P01569 189 aa10.53□□□□□ -0.72
USF1-209ENST00000529476 GP9P14770 177 aa10.53□□□□□ -0.72
USF1-209ENST00000529476 RPL29P47914 159 aaKnown RBP10.53□□□□□ -0.72
USF1-209ENST00000529476 PLP1P60201 277 aa10.53□□□□□ -0.72
USF1-209ENST00000529476 PRR20EP86478 221 aa10.53□□□□□ -0.72
USF1-209ENST00000529476 PRR20CP86479 221 aa10.53□□□□□ -0.72
USF1-209ENST00000529476 PRR20DP86480 221 aa10.53□□□□□ -0.72
USF1-209ENST00000529476 PRR20BP86481 221 aa10.53□□□□□ -0.72
USF1-209ENST00000529476 PRR20AP86496 221 aa10.53□□□□□ -0.72
USF1-209ENST00000529476 FAM90A2PQ658T7 463 aa10.53□□□□□ -0.72
USF1-209ENST00000529476 C16orf54Q6UWD8 224 aa10.53□□□□□ -0.72
USF1-209ENST00000529476 RBPMS2Q6ZRY4 209 aaKnown RBP10.53□□□□□ -0.72
USF1-209ENST00000529476 TCF24Q7RTU0 167 aa10.53□□□□□ -0.72
USF1-209ENST00000529476 AKAP14Q86UN6 197 aa10.53□□□□□ -0.72
USF1-209ENST00000529476 TCTE3Q8IZS6 198 aa10.53□□□□□ -0.72
USF1-209ENST00000529476 PPP1R14BQ96C90 147 aa10.53□□□□□ -0.72
USF1-209ENST00000529476 GRAMD2BQ96HH9 432 aa10.53□□□□□ -0.72
USF1-209ENST00000529476 MFFQ9GZY8 342 aa10.53□□□□□ -0.72
USF1-209ENST00000529476 ARL6Q9H0F7 186 aa10.53□□□□□ -0.72
USF1-209ENST00000529476 TMEM231Q9H6L2 316 aa10.53□□□□□ -0.72
USF1-209ENST00000529476 AURKAIP1Q9NWT8 199 aaPredicted RBP10.53□□□□□ -0.72
USF1-209ENST00000529476 PXMP4Q9Y6I8 212 aa10.53□□□□□ -0.72
USF1-209ENST00000529476 IGKV3-7A0A075B6H7 116 aa10.52□□□□□ -0.73
USF1-209ENST00000529476 TRAV25A0A0B4J276 109 aa10.52□□□□□ -0.73
USF1-209ENST00000529476 BUB3O43684 328 aa10.52□□□□□ -0.73
USF1-209ENST00000529476 OR5G3P0C626 314 aa10.52□□□□□ -0.73
USF1-209ENST00000529476 LAMTOR1Q6IAA8 161 aa10.52□□□□□ -0.73
USF1-209ENST00000529476 PATE2Q6UY27 113 aa10.52□□□□□ -0.73
USF1-209ENST00000529476 SCGB1C1Q8TD33 95 aa10.52□□□□□ -0.73
USF1-209ENST00000529476 GLMPQ8WWB7 406 aa10.52□□□□□ -0.73
USF1-209ENST00000529476 UHRF2Q96PU4 802 aa10.52□□□□□ -0.73
USF1-209ENST00000529476 NEURL2Q9BR09 285 aa10.52□□□□□ -0.73
USF1-209ENST00000529476 RSG1Q9BU20 258 aa10.52□□□□□ -0.73
USF1-209ENST00000529476 SLC39A9Q9NUM3 307 aa10.52□□□□□ -0.73
USF1-209ENST00000529476 HIGD1AQ9Y241 93 aa10.52□□□□□ -0.73
USF1-209ENST00000529476 TSPAN4O14817 238 aa10.51□□□□□ -0.73
USF1-209ENST00000529476 B2MP61769 119 aa10.51□□□□□ -0.73
USF1-209ENST00000529476 RPL11P62913 178 aaKnown RBP10.51□□□□□ -0.73
USF1-209ENST00000529476 CD300CQ08708 224 aa10.51□□□□□ -0.73
USF1-209ENST00000529476 PXDC1Q5TGL8 231 aa10.51□□□□□ -0.73
USF1-209ENST00000529476 GBGT1Q8N5D6 347 aa10.51□□□□□ -0.73
USF1-209ENST00000529476 ZNF709Q8N972 641 aa10.51□□□□□ -0.73
USF1-209ENST00000529476 SCRT1Q9BWW7 348 aa10.51□□□□□ -0.73
USF1-209ENST00000529476 PARD6GQ9BYG4 376 aaPredicted RBP10.51□□□□□ -0.73
USF1-209ENST00000529476 PFDN2Q9UHV9 154 aa10.51□□□□□ -0.73
USF1-209ENST00000529476 ZNF98A6NK75 572 aa10.5□□□□□ -0.73
USF1-209ENST00000529476 HMSDA8MTL9 139 aa10.5□□□□□ -0.73
USF1-209ENST00000529476 H3BRN7 92 aa10.5□□□□□ -0.73
USF1-209ENST00000529476 COX7A2P2O60397 106 aa10.5□□□□□ -0.73
USF1-209ENST00000529476 TFPI2P48307 235 aa10.5□□□□□ -0.73
USF1-209ENST00000529476 ZNF266Q14584 549 aa10.5□□□□□ -0.73
USF1-209ENST00000529476 LEMD1Q68G75 181 aa10.5□□□□□ -0.73
USF1-209ENST00000529476 Q6ZRG5 221 aa10.5□□□□□ -0.73
USF1-209ENST00000529476 TMEM37Q8WXS4 190 aa10.5□□□□□ -0.73
USF1-209ENST00000529476 SHANK2-AS3Q9BTD1 123 aa10.5□□□□□ -0.73
USF1-209ENST00000529476 SLC25A39Q9BZJ4 359 aaPredicted RBP10.5□□□□□ -0.73
USF1-209ENST00000529476 ARV1Q9H2C2 271 aa10.5□□□□□ -0.73
USF1-209ENST00000529476 SLC25A22Q9H936 323 aa10.5□□□□□ -0.73
USF1-209ENST00000529476 RFNGQ9Y644 331 aa10.5□□□□□ -0.73
USF1-209ENST00000529476 C17orf112F2Z3M2 114 aa10.49□□□□□ -0.73
USF1-209ENST00000529476 CD5P06127 495 aa10.49□□□□□ -0.73
USF1-209ENST00000529476 CXCL2P19875 107 aa10.49□□□□□ -0.73
USF1-209ENST00000529476 ZNF345Q14585 488 aa10.49□□□□□ -0.73
USF1-209ENST00000529476 GCSAMLQ5JQS6 135 aa10.49□□□□□ -0.73
USF1-209ENST00000529476 C1orf194Q5T5A4 169 aa10.49□□□□□ -0.73
USF1-209ENST00000529476 C10orf113Q5VZT2 155 aa10.49□□□□□ -0.73
USF1-209ENST00000529476 RPL7L1Q6DKI1 246 aaKnown RBP10.49□□□□□ -0.73
USF1-209ENST00000529476 SIGLEC15Q6ZMC9 328 aa10.49□□□□□ -0.73
USF1-209ENST00000529476 OR8I2Q8N0Y5 310 aa10.49□□□□□ -0.73
USF1-209ENST00000529476 KCNRGQ8N5I3 272 aa10.49□□□□□ -0.73
USF1-209ENST00000529476 HSD17B11Q8NBQ5 300 aa10.49□□□□□ -0.73
USF1-209ENST00000529476 SPAG8Q99932 426 aaPredicted RBP10.49□□□□□ -0.73
USF1-209ENST00000529476 MS4A6AQ9H2W1 248 aa10.49□□□□□ -0.73
USF1-209ENST00000529476 DNAJC4Q9NNZ3 241 aa10.49□□□□□ -0.73
USF1-209ENST00000529476 KCNIP2Q9NS61 270 aa10.49□□□□□ -0.73
USF1-209ENST00000529476 ELOA3CA0A087WX78 387 aaPredicted RBP10.48□□□□□ -0.73
USF1-209ENST00000529476 HELTA6NFD8 242 aa10.48□□□□□ -0.73
USF1-209ENST00000529476 K7EIL1 84 aa10.48□□□□□ -0.73
USF1-209ENST00000529476 C1QBP02746 253 aa10.48□□□□□ -0.73
USF1-209ENST00000529476 CD7P09564 240 aa10.48□□□□□ -0.73
USF1-209ENST00000529476 S100A7P31151 101 aa10.48□□□□□ -0.73
USF1-209ENST00000529476 MORN5Q5VZ52 161 aa10.48□□□□□ -0.73
USF1-209ENST00000529476 LINC00305Q7Z4B0 112 aa10.48□□□□□ -0.73
USF1-209ENST00000529476 WFDC3Q8IUB2 231 aa10.48□□□□□ -0.73
USF1-209ENST00000529476 Q8N1Y9 231 aa10.48□□□□□ -0.73
USF1-209ENST00000529476 STXBP6Q8NFX7 210 aa10.48□□□□□ -0.73
USF1-209ENST00000529476 OR1L4Q8NGR5 311 aa10.48□□□□□ -0.73
USF1-209ENST00000529476 SLC25A32Q9H2D1 315 aa10.48□□□□□ -0.73
USF1-209ENST00000529476 BORCS7-ASMTA0A0B4J1R7 106 aa10.47□□□□□ -0.73
USF1-209ENST00000529476 OR4C46A6NHA9 309 aa10.47□□□□□ -0.73
USF1-209ENST00000529476 DNASE2O00115 360 aaPredicted RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms