RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 METTL26Q96S19 204 aa10.46□□□□□ -0.73
CAPN1-212ENST00000527887 SLC25A31Q9H0C2 315 aa10.46□□□□□ -0.73
CAPN1-212ENST00000527887 MS4A6AQ9H2W1 248 aa10.46□□□□□ -0.73
CAPN1-212ENST00000527887 FNDC4Q9H6D8 234 aaPredicted RBP10.46□□□□□ -0.73
CAPN1-212ENST00000527887 KLK5Q9Y337 293 aaPredicted RBP10.46□□□□□ -0.73
CAPN1-212ENST00000527887 IGKV3-7A0A075B6H7 116 aa10.45□□□□□ -0.74
CAPN1-212ENST00000527887 IGHV3OR16-13A0A075B7E8 117 aa10.45□□□□□ -0.74
CAPN1-212ENST00000527887 IGHV3-74A0A0B4J1X5 117 aa10.45□□□□□ -0.74
CAPN1-212ENST00000527887 TSC22D2O75157 780 aa10.45□□□□□ -0.74
CAPN1-212ENST00000527887 RPL12P30050 165 aaKnown RBP10.45□□□□□ -0.74
CAPN1-212ENST00000527887 ATP5IP56385 69 aaPredicted RBP10.45□□□□□ -0.74
CAPN1-212ENST00000527887 RPL11P62913 178 aaKnown RBP10.45□□□□□ -0.74
CAPN1-212ENST00000527887 BAXQ07812 192 aa10.45□□□□□ -0.74
CAPN1-212ENST00000527887 ETFRF1Q6IPR1 90 aa10.45□□□□□ -0.74
CAPN1-212ENST00000527887 CEMP1Q6PRD7 247 aaPredicted RBP10.45□□□□□ -0.74
CAPN1-212ENST00000527887 ARL6Q9H0F7 186 aa10.45□□□□□ -0.74
CAPN1-212ENST00000527887 HEYLQ9NQ87 328 aaPredicted RBP10.45□□□□□ -0.74
CAPN1-212ENST00000527887 LYRM2Q9NU23 88 aaPredicted RBP10.45□□□□□ -0.74
CAPN1-212ENST00000527887 RCL1Q9Y2P8 373 aaKnown RBP10.45□□□□□ -0.74
CAPN1-212ENST00000527887 LSM5Q9Y4Y9 91 aaKnown RBP10.45□□□□□ -0.74
CAPN1-212ENST00000527887 KANTRA0A1W2PQU2 76 aa10.44□□□□□ -0.74
CAPN1-212ENST00000527887 BCL2L11O43521 198 aa10.44□□□□□ -0.74
CAPN1-212ENST00000527887 SCGB1D2O95969 90 aa10.44□□□□□ -0.74
CAPN1-212ENST00000527887 APOHP02749 345 aaPredicted RBP10.44□□□□□ -0.74
CAPN1-212ENST00000527887 POLR2GP62487 172 aaKnown RBP eCLIP10.44□□□□□ -0.74
CAPN1-212ENST00000527887 VAMP2P63027 116 aa10.44□□□□□ -0.74
CAPN1-212ENST00000527887 EIF5AP63241 154 aaKnown RBP10.44□□□□□ -0.74
CAPN1-212ENST00000527887 TMEM41BQ5BJD5 291 aa10.44□□□□□ -0.74
CAPN1-212ENST00000527887 ZNF767PQ75MW2 155 aa10.44□□□□□ -0.74
CAPN1-212ENST00000527887 LILRB2Q8N423 598 aa10.44□□□□□ -0.74
CAPN1-212ENST00000527887 OR1S2Q8NGQ3 325 aa10.44□□□□□ -0.74
CAPN1-212ENST00000527887 Q8WTZ3 238 aa10.44□□□□□ -0.74
CAPN1-212ENST00000527887 GRAMD2BQ96HH9 432 aa10.44□□□□□ -0.74
CAPN1-212ENST00000527887 RARRES2Q99969 163 aa10.44□□□□□ -0.74
CAPN1-212ENST00000527887 BOLA1Q9Y3E2 137 aa10.44□□□□□ -0.74
CAPN1-212ENST00000527887 ALMS1Q8TCU4 4167 aa10.44□□□□□ -0.74
CAPN1-212ENST00000527887 CEBPZOSA8MTT3 80 aa10.43□□□□□ -0.74
CAPN1-212ENST00000527887 IGKV1-17P01599 117 aa10.43□□□□□ -0.74
CAPN1-212ENST00000527887 AP2S1P53680 142 aaPredicted RBP10.43□□□□□ -0.74
CAPN1-212ENST00000527887 DEFB131AP59861 70 aa10.43□□□□□ -0.74
CAPN1-212ENST00000527887 YPEL3P61236 119 aaPredicted RBP10.43□□□□□ -0.74
CAPN1-212ENST00000527887 PMS2P11Q13670 270 aa10.43□□□□□ -0.74
CAPN1-212ENST00000527887 MLANAQ16655 118 aa10.43□□□□□ -0.74
CAPN1-212ENST00000527887 SLC24A4Q8NFF2 622 aa10.43□□□□□ -0.74
CAPN1-212ENST00000527887 STOML3Q8TAV4 291 aa10.43□□□□□ -0.74
CAPN1-212ENST00000527887 PHYHIPLQ96FC7 376 aa10.43□□□□□ -0.74
CAPN1-212ENST00000527887 ARPC5LQ9BPX5 153 aa10.43□□□□□ -0.74
CAPN1-212ENST00000527887 MRPL36Q9P0J6 103 aaKnown RBP10.43□□□□□ -0.74
CAPN1-212ENST00000527887 U3KQ87 197 aa10.43□□□□□ -0.74
CAPN1-212ENST00000527887 HYDINQ4G0P3 5121 aa10.43□□□□□ -0.74
CAPN1-212ENST00000527887 EPPK1P58107 5090 aaKnown RBP10.42□□□□□ -0.74
CAPN1-212ENST00000527887 HELTA6NFD8 242 aa10.42□□□□□ -0.74
CAPN1-212ENST00000527887 IFNA7P01567 189 aa10.42□□□□□ -0.74
CAPN1-212ENST00000527887 IGLC1P0CG04 106 aa10.42□□□□□ -0.74
CAPN1-212ENST00000527887 PAX9P55771 341 aa10.42□□□□□ -0.74
CAPN1-212ENST00000527887 RPP30P78346 268 aaKnown RBP10.42□□□□□ -0.74
CAPN1-212ENST00000527887 IFITM2Q01629 132 aa10.42□□□□□ -0.74
CAPN1-212ENST00000527887 ZNF124Q15973 351 aa10.42□□□□□ -0.74
CAPN1-212ENST00000527887 TEX261Q6UWH6 196 aa10.42□□□□□ -0.74
CAPN1-212ENST00000527887 STHQ8IWL8 128 aa10.42□□□□□ -0.74
CAPN1-212ENST00000527887 LINC00476Q8WZB0 136 aa10.42□□□□□ -0.74
CAPN1-212ENST00000527887 C11orf68Q9H3H3 251 aaKnown RBP10.42□□□□□ -0.74
CAPN1-212ENST00000527887 RABAC1Q9UI14 185 aa10.42□□□□□ -0.74
CAPN1-212ENST00000527887 U3KQE9 123 aa10.42□□□□□ -0.74
CAPN1-212ENST00000527887 IGHV3-66A0A0C4DH42 116 aa10.41□□□□□ -0.74
CAPN1-212ENST00000527887 K7EQG2 157 aa10.41□□□□□ -0.74
CAPN1-212ENST00000527887 SSSCA1O60232 199 aa10.41□□□□□ -0.74
CAPN1-212ENST00000527887 NPY1RP25929 384 aa10.41□□□□□ -0.74
CAPN1-212ENST00000527887 OR10J1P30954 320 aa10.41□□□□□ -0.74
CAPN1-212ENST00000527887 EWSR1Q01844 656 aaKnown RBP eCLIP10.41□□□□□ -0.74
CAPN1-212ENST00000527887 TIGITQ495A1 244 aa10.41□□□□□ -0.74
CAPN1-212ENST00000527887 TMEM252Q8N6L7 170 aa10.41□□□□□ -0.74
CAPN1-212ENST00000527887 OR11H2Q8NH07 326 aa10.41□□□□□ -0.74
CAPN1-212ENST00000527887 DTD1Q8TEA8 209 aa10.41□□□□□ -0.74
CAPN1-212ENST00000527887 SEPSECSQ9HD40 501 aaKnown RBP10.41□□□□□ -0.74
CAPN1-212ENST00000527887 CA1P00915 261 aaPredicted RBP10.4□□□□□ -0.74
CAPN1-212ENST00000527887 SPP1P10451 314 aa10.4□□□□□ -0.74
CAPN1-212ENST00000527887 RND2P52198 227 aa10.4□□□□□ -0.74
CAPN1-212ENST00000527887 MORN3Q6PF18 240 aaPredicted RBP10.4□□□□□ -0.74
CAPN1-212ENST00000527887 STX12Q86Y82 276 aa10.4□□□□□ -0.74
CAPN1-212ENST00000527887 MAGT1Q9H0U3 335 aa10.4□□□□□ -0.74
CAPN1-212ENST00000527887 RBKSQ9H477 322 aa10.4□□□□□ -0.74
CAPN1-212ENST00000527887 PSENENQ9NZ42 101 aa10.4□□□□□ -0.74
CAPN1-212ENST00000527887 BORCS7-ASMTA0A0B4J1R7 106 aa10.39□□□□□ -0.75
CAPN1-212ENST00000527887 LY6G6CO95867 125 aa10.39□□□□□ -0.75
CAPN1-212ENST00000527887 SULT1A1P50225 295 aa10.39□□□□□ -0.75
CAPN1-212ENST00000527887 CAV2P51636 162 aa10.39□□□□□ -0.75
CAPN1-212ENST00000527887 HBG1P69891 147 aa10.39□□□□□ -0.75
CAPN1-212ENST00000527887 HBG2P69892 147 aa10.39□□□□□ -0.75
CAPN1-212ENST00000527887 ZNF266Q14584 549 aa10.39□□□□□ -0.75
CAPN1-212ENST00000527887 LEMD1Q68G75 181 aa10.39□□□□□ -0.75
CAPN1-212ENST00000527887 EIF5AL1Q6IS14 154 aaKnown RBP10.39□□□□□ -0.75
CAPN1-212ENST00000527887 C16orf54Q6UWD8 224 aa10.39□□□□□ -0.75
CAPN1-212ENST00000527887 TMEM14EPQ6UXP3 125 aa10.39□□□□□ -0.75
CAPN1-212ENST00000527887 ZNF680Q8NEM1 530 aa10.39□□□□□ -0.75
CAPN1-212ENST00000527887 STXBP6Q8NFX7 210 aa10.39□□□□□ -0.75
CAPN1-212ENST00000527887 PHLDA1Q8WV24 401 aaPredicted RBP10.39□□□□□ -0.75
CAPN1-212ENST00000527887 PFDN2Q9UHV9 154 aa10.39□□□□□ -0.75
CAPN1-212ENST00000527887 BIRC6Q9NR09 4857 aa10.38□□□□□ -0.75
CAPN1-212ENST00000527887 TOMM40O96008 361 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms