RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 NOXA1Q86UR1 476 aa11.44□□□□□ -0.58
PTPRU-210ENST00000527027 OR4D10Q8NGI6 311 aa11.44□□□□□ -0.58
PTPRU-210ENST00000527027 OR51G1Q8NGK1 321 aa11.44□□□□□ -0.58
PTPRU-210ENST00000527027 MARCH1Q8TCQ1 289 aa11.44□□□□□ -0.58
PTPRU-210ENST00000527027 GLYATL2Q8WU03 294 aa11.44□□□□□ -0.58
PTPRU-210ENST00000527027 TMEM170AQ8WVE7 144 aa11.44□□□□□ -0.58
PTPRU-210ENST00000527027 GPR146Q96CH1 333 aa11.44□□□□□ -0.58
PTPRU-210ENST00000527027 ACY3Q96HD9 319 aa11.44□□□□□ -0.58
PTPRU-210ENST00000527027 LINC00052Q96N35 136 aa11.44□□□□□ -0.58
PTPRU-210ENST00000527027 SLC25A21Q9BQT8 299 aaPredicted RBP11.44□□□□□ -0.58
PTPRU-210ENST00000527027 SAV1Q9H4B6 383 aaPredicted RBP11.44□□□□□ -0.58
PTPRU-210ENST00000527027 CACNG5Q9UF02 275 aa11.44□□□□□ -0.58
PTPRU-210ENST00000527027 TEX13DA0A0J9YY54 714 aaPredicted RBP11.43□□□□□ -0.58
PTPRU-210ENST00000527027 LYRM1O43325 122 aa11.43□□□□□ -0.58
PTPRU-210ENST00000527027 OR5AC1P0C628 307 aa11.43□□□□□ -0.58
PTPRU-210ENST00000527027 HTN3P15516 51 aa11.43□□□□□ -0.58
PTPRU-210ENST00000527027 NUP62P37198 522 aaPredicted RBP11.43□□□□□ -0.58
PTPRU-210ENST00000527027 ID1P41134 155 aa11.43□□□□□ -0.58
PTPRU-210ENST00000527027 ASAH1Q13510 395 aa11.43□□□□□ -0.58
PTPRU-210ENST00000527027 SCGB2B2Q4G0G5 96 aa11.43□□□□□ -0.58
PTPRU-210ENST00000527027 ZNF709Q8N972 641 aa11.43□□□□□ -0.58
PTPRU-210ENST00000527027 LHFPL5Q8TAF8 219 aa11.43□□□□□ -0.58
PTPRU-210ENST00000527027 RBPMSQ93062 196 aaKnown RBP11.43□□□□□ -0.58
PTPRU-210ENST00000527027 PFDN2Q9UHV9 154 aa11.43□□□□□ -0.58
PTPRU-210ENST00000527027 SPATA31B1PQ5VZV4 182 aa11.42□□□□□ -0.58
PTPRU-210ENST00000527027 SELENOHQ8IZQ5 122 aaKnown RBP11.42□□□□□ -0.58
PTPRU-210ENST00000527027 OR4B1Q8NGF8 309 aa11.42□□□□□ -0.58
PTPRU-210ENST00000527027 OR51S1Q8NGJ8 323 aa11.42□□□□□ -0.58
PTPRU-210ENST00000527027 RNF125Q96EQ8 232 aa11.42□□□□□ -0.58
PTPRU-210ENST00000527027 GOLT1BQ9Y3E0 138 aa11.42□□□□□ -0.58
PTPRU-210ENST00000527027 HBE1P02100 147 aa11.41□□□□□ -0.58
PTPRU-210ENST00000527027 PSMB3P49720 205 aa11.41□□□□□ -0.58
PTPRU-210ENST00000527027 PSG9Q00887 426 aa11.41□□□□□ -0.58
PTPRU-210ENST00000527027 NMSQ5H8A3 153 aa11.41□□□□□ -0.58
PTPRU-210ENST00000527027 OR8G2PQ6IF36 304 aa11.41□□□□□ -0.58
PTPRU-210ENST00000527027 TMEM88Q6PEY1 159 aa11.41□□□□□ -0.58
PTPRU-210ENST00000527027 RTBDNQ9BSG5 229 aaPredicted RBP11.41□□□□□ -0.58
PTPRU-210ENST00000527027 PBDC1Q9BVG4 233 aa11.41□□□□□ -0.58
PTPRU-210ENST00000527027 SLC35B3Q9H1N7 401 aa11.41□□□□□ -0.58
PTPRU-210ENST00000527027 NAA60Q9H7X0 242 aa11.41□□□□□ -0.58
PTPRU-210ENST00000527027 CACFD1Q9UGQ2 172 aa11.41□□□□□ -0.58
PTPRU-210ENST00000527027 C14orf166Q9Y224 244 aaKnown RBP11.41□□□□□ -0.58
PTPRU-210ENST00000527027 YTHDF2Q9Y5A9 579 aaKnown RBP11.41□□□□□ -0.58
PTPRU-210ENST00000527027 LOC102723971A0A1B0GUV8 181 aa11.4□□□□□ -0.58
PTPRU-210ENST00000527027 LINC00854A0A1B0GVQ3 168 aa11.4□□□□□ -0.58
PTPRU-210ENST00000527027 FAM240BA0A1B0GVZ2 78 aa11.4□□□□□ -0.58
PTPRU-210ENST00000527027 FAM3BP58499 235 aaPredicted RBP11.4□□□□□ -0.58
PTPRU-210ENST00000527027 TMEM268Q5VZI3 342 aa11.4□□□□□ -0.58
PTPRU-210ENST00000527027 C1orf158Q8N1D5 194 aa11.4□□□□□ -0.58
PTPRU-210ENST00000527027 COQ8AQ8NI60 647 aa11.4□□□□□ -0.58
PTPRU-210ENST00000527027 ENKURQ8TC29 256 aa11.4□□□□□ -0.58
PTPRU-210ENST00000527027 PIGBOS1A0A0B4J2F0 54 aa11.39□□□□□ -0.59
PTPRU-210ENST00000527027 SOCS3O14543 225 aa11.39□□□□□ -0.59
PTPRU-210ENST00000527027 PLA2G10O15496 165 aa11.39□□□□□ -0.59
PTPRU-210ENST00000527027 PAX9P55771 341 aa11.39□□□□□ -0.59
PTPRU-210ENST00000527027 DAD1P61803 113 aa11.39□□□□□ -0.59
PTPRU-210ENST00000527027 RRN3P1Q2M238 152 aa11.39□□□□□ -0.59
PTPRU-210ENST00000527027 C1orf194Q5T5A4 169 aa11.39□□□□□ -0.59
PTPRU-210ENST00000527027 FAM78BQ5VT40 261 aa11.39□□□□□ -0.59
PTPRU-210ENST00000527027 FAAP20Q6NZ36 180 aa11.39□□□□□ -0.59
PTPRU-210ENST00000527027 EBLN2Q6P2I7 272 aa11.39□□□□□ -0.59
PTPRU-210ENST00000527027 TMED3Q9Y3Q3 217 aa11.39□□□□□ -0.59
PTPRU-210ENST00000527027 U3KQ87 197 aa11.39□□□□□ -0.59
PTPRU-210ENST00000527027 ISLRO14498 428 aa11.38□□□□□ -0.59
PTPRU-210ENST00000527027 CDK2AP2O75956 126 aa11.38□□□□□ -0.59
PTPRU-210ENST00000527027 NDUFB6O95139 128 aa11.38□□□□□ -0.59
PTPRU-210ENST00000527027 SUPT4H1P63272 117 aaKnown RBP11.38□□□□□ -0.59
PTPRU-210ENST00000527027 GSG1LQ6UXU4 331 aa11.38□□□□□ -0.59
PTPRU-210ENST00000527027 C15orf53Q8NAA6 179 aa11.38□□□□□ -0.59
PTPRU-210ENST00000527027 GPR132Q9UNW8 380 aa11.38□□□□□ -0.59
PTPRU-210ENST00000527027 TMEM56-RWDD3S4R434 201 aa11.38□□□□□ -0.59
PTPRU-210ENST00000527027 LRP1BQ9NZR2 4599 aa11.37□□□□□ -0.59
PTPRU-210ENST00000527027 A0A0J9YX75 114 aa11.37□□□□□ -0.59
PTPRU-210ENST00000527027 CRYM-AS1A6NIL9 109 aa11.37□□□□□ -0.59
PTPRU-210ENST00000527027 ZFP92A6NM28 416 aa11.37□□□□□ -0.59
PTPRU-210ENST00000527027 C16orf90A8MZG2 172 aa11.37□□□□□ -0.59
PTPRU-210ENST00000527027 F6UB75 175 aa11.37□□□□□ -0.59
PTPRU-210ENST00000527027 PTTG1O95997 202 aa11.37□□□□□ -0.59
PTPRU-210ENST00000527027 SULT1A3P0DMM9 295 aa11.37□□□□□ -0.59
PTPRU-210ENST00000527027 SULT1A4P0DMN0 295 aa11.37□□□□□ -0.59
PTPRU-210ENST00000527027 UBE2MP61081 183 aaKnown RBP11.37□□□□□ -0.59
PTPRU-210ENST00000527027 IFITM3Q01628 133 aa11.37□□□□□ -0.59
PTPRU-210ENST00000527027 ZNF90Q03938 601 aa11.37□□□□□ -0.59
PTPRU-210ENST00000527027 TNP2Q05952 138 aa11.37□□□□□ -0.59
PTPRU-210ENST00000527027 MAGT1Q9H0U3 335 aa11.37□□□□□ -0.59
PTPRU-210ENST00000527027 IGKV1D-37A0A075B6S9 117 aa11.36□□□□□ -0.59
PTPRU-210ENST00000527027 SNRPGP15A8MWD9 76 aa11.36□□□□□ -0.59
PTPRU-210ENST00000527027 GPX4P36969 197 aaPredicted RBP11.36□□□□□ -0.59
PTPRU-210ENST00000527027 ATP5IP56385 69 aaPredicted RBP11.36□□□□□ -0.59
PTPRU-210ENST00000527027 GAMTQ14353 236 aa11.36□□□□□ -0.59
PTPRU-210ENST00000527027 RGS21Q2M5E4 152 aa11.36□□□□□ -0.59
PTPRU-210ENST00000527027 LGI3Q8N145 548 aa11.36□□□□□ -0.59
PTPRU-210ENST00000527027 IL22RA2Q969J5 263 aa11.36□□□□□ -0.59
PTPRU-210ENST00000527027 ATG101Q9BSB4 218 aa11.36□□□□□ -0.59
PTPRU-210ENST00000527027 RPRMQ9NS64 109 aa11.36□□□□□ -0.59
PTPRU-210ENST00000527027 HSPB7Q9UBY9 170 aa11.36□□□□□ -0.59
PTPRU-210ENST00000527027 KCNIP3Q9Y2W7 256 aa11.36□□□□□ -0.59
PTPRU-210ENST00000527027 TCRBP04435 133 aa11.35□□□□□ -0.59
PTPRU-210ENST00000527027 FABP1P07148 127 aa11.35□□□□□ -0.59
PTPRU-210ENST00000527027 ANXA3P12429 323 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms