RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 ORM2P19652 201 aa12.52□□□□□ -0.41
CAPN1-205ENST00000526954 C9orf62Q8N4C0 152 aa12.52□□□□□ -0.41
CAPN1-205ENST00000526954 PSMG3Q9BT73 122 aaPredicted RBP12.52□□□□□ -0.41
CAPN1-205ENST00000526954 GPR61Q9BZJ8 451 aa12.52□□□□□ -0.41
CAPN1-205ENST00000526954 ARV1Q9H2C2 271 aa12.52□□□□□ -0.41
CAPN1-205ENST00000526954 VSIRQ9H7M9 311 aa12.52□□□□□ -0.41
CAPN1-205ENST00000526954 ELOA3CA0A087WX78 387 aaPredicted RBP12.51□□□□□ -0.41
CAPN1-205ENST00000526954 A0A1W2PS18 150 aa12.51□□□□□ -0.41
CAPN1-205ENST00000526954 CHEK1O14757 476 aa12.51□□□□□ -0.41
CAPN1-205ENST00000526954 APOHP02749 345 aaPredicted RBP12.51□□□□□ -0.41
CAPN1-205ENST00000526954 ATP6V0CP27449 155 aa12.51□□□□□ -0.41
CAPN1-205ENST00000526954 S100A7P31151 101 aa12.51□□□□□ -0.41
CAPN1-205ENST00000526954 BMI1P35226 326 aa12.51□□□□□ -0.41
CAPN1-205ENST00000526954 LAMTOR1Q6IAA8 161 aa12.51□□□□□ -0.41
CAPN1-205ENST00000526954 PATE2Q6UY27 113 aa12.51□□□□□ -0.41
CAPN1-205ENST00000526954 OR1B1Q8NGR6 318 aa12.51□□□□□ -0.41
CAPN1-205ENST00000526954 NARS2Q96I59 477 aaKnown RBP12.51□□□□□ -0.41
CAPN1-205ENST00000526954 RHPN1-AS1Q9BWJ2 59 aa12.51□□□□□ -0.41
CAPN1-205ENST00000526954 TECRQ9NZ01 308 aaKnown RBP12.51□□□□□ -0.41
CAPN1-205ENST00000526954 PFDN2Q9UHV9 154 aa12.51□□□□□ -0.41
CAPN1-205ENST00000526954 HIGD1AQ9Y241 93 aa12.51□□□□□ -0.41
CAPN1-205ENST00000526954 CMYA5Q8N3K9 4069 aa12.51□□□□□ -0.41
CAPN1-205ENST00000526954 BUB3O43684 328 aa12.5□□□□□ -0.41
CAPN1-205ENST00000526954 IGLV1-51P01701 117 aa12.5□□□□□ -0.41
CAPN1-205ENST00000526954 DEFB114Q30KQ6 69 aa12.5□□□□□ -0.41
CAPN1-205ENST00000526954 S100A7AQ86SG5 101 aa12.5□□□□□ -0.41
CAPN1-205ENST00000526954 HSD17B11Q8NBQ5 300 aa12.5□□□□□ -0.41
CAPN1-205ENST00000526954 OR1L4Q8NGR5 311 aa12.5□□□□□ -0.41
CAPN1-205ENST00000526954 TMEM37Q8WXS4 190 aa12.5□□□□□ -0.41
CAPN1-205ENST00000526954 ST8SIA2Q92186 375 aa12.5□□□□□ -0.41
CAPN1-205ENST00000526954 GNPNAT1Q96EK6 184 aaPredicted RBP12.5□□□□□ -0.41
CAPN1-205ENST00000526954 PFDN5Q99471 154 aa12.5□□□□□ -0.41
CAPN1-205ENST00000526954 TMEM231Q9H6L2 316 aa12.5□□□□□ -0.41
CAPN1-205ENST00000526954 DNAJC4Q9NNZ3 241 aa12.5□□□□□ -0.41
CAPN1-205ENST00000526954 MLXQ9UH92 298 aa12.5□□□□□ -0.41
CAPN1-205ENST00000526954 NOTCH3Q9UM47 2321 aa12.5□□□□□ -0.41
CAPN1-205ENST00000526954 IGHV3-49A0A0A0MS15 119 aa12.49□□□□□ -0.41
CAPN1-205ENST00000526954 COX7A2P2O60397 106 aa12.49□□□□□ -0.41
CAPN1-205ENST00000526954 OR5G3P0C626 314 aa12.49□□□□□ -0.41
CAPN1-205ENST00000526954 SERF2P84101 59 aa12.49□□□□□ -0.41
CAPN1-205ENST00000526954 C1orf194Q5T5A4 169 aa12.49□□□□□ -0.41
CAPN1-205ENST00000526954 OR2K2Q8NGT1 345 aa12.49□□□□□ -0.41
CAPN1-205ENST00000526954 OR2G3Q8NGZ4 309 aa12.49□□□□□ -0.41
CAPN1-205ENST00000526954 DYNLRB2Q8TF09 96 aa12.49□□□□□ -0.41
CAPN1-205ENST00000526954 GATAD1Q8WUU5 269 aa12.49□□□□□ -0.41
CAPN1-205ENST00000526954 GRAMD2BQ96HH9 432 aa12.49□□□□□ -0.41
CAPN1-205ENST00000526954 DOK5Q9P104 306 aa12.49□□□□□ -0.41
CAPN1-205ENST00000526954 IGHV3OR16-13A0A075B7E8 117 aa12.48□□□□□ -0.41
CAPN1-205ENST00000526954 IGHV3-74A0A0B4J1X5 117 aa12.48□□□□□ -0.41
CAPN1-205ENST00000526954 H3BRN7 92 aa12.48□□□□□ -0.41
CAPN1-205ENST00000526954 CD5P06127 495 aa12.48□□□□□ -0.41
CAPN1-205ENST00000526954 EIF5AP63241 154 aaKnown RBP12.48□□□□□ -0.41
CAPN1-205ENST00000526954 FFAR4Q5NUL3 377 aa12.48□□□□□ -0.41
CAPN1-205ENST00000526954 C10orf113Q5VZT2 155 aa12.48□□□□□ -0.41
CAPN1-205ENST00000526954 C16orf54Q6UWD8 224 aa12.48□□□□□ -0.41
CAPN1-205ENST00000526954 STOML3Q8TAV4 291 aa12.48□□□□□ -0.41
CAPN1-205ENST00000526954 RNF2Q99496 336 aa12.48□□□□□ -0.41
CAPN1-205ENST00000526954 SHANK2-AS3Q9BTD1 123 aa12.48□□□□□ -0.41
CAPN1-205ENST00000526954 ZNF471Q9BX82 626 aaPredicted RBP12.48□□□□□ -0.41
CAPN1-205ENST00000526954 SLC25A39Q9BZJ4 359 aaPredicted RBP12.48□□□□□ -0.41
CAPN1-205ENST00000526954 RNF24Q9Y225 148 aa12.48□□□□□ -0.41
CAPN1-205ENST00000526954 RFNGQ9Y644 331 aa12.48□□□□□ -0.41
CAPN1-205ENST00000526954 ZNF98A6NK75 572 aa12.47□□□□□ -0.41
CAPN1-205ENST00000526954 C4BPBP20851 252 aa12.47□□□□□ -0.41
CAPN1-205ENST00000526954 NKX2-5P52952 324 aaPredicted RBP12.47□□□□□ -0.41
CAPN1-205ENST00000526954 OXLD1Q5BKU9 147 aa12.47□□□□□ -0.41
CAPN1-205ENST00000526954 SAMD5Q5TGI4 173 aa12.47□□□□□ -0.41
CAPN1-205ENST00000526954 FAM90A2PQ658T7 463 aa12.47□□□□□ -0.41
CAPN1-205ENST00000526954 LINC00305Q7Z4B0 112 aa12.47□□□□□ -0.41
CAPN1-205ENST00000526954 GLMPQ8WWB7 406 aa12.47□□□□□ -0.41
CAPN1-205ENST00000526954 PPP1R14BQ96C90 147 aa12.47□□□□□ -0.41
CAPN1-205ENST00000526954 UHRF2Q96PU4 802 aa12.47□□□□□ -0.41
CAPN1-205ENST00000526954 SH3BGRL3Q9H299 93 aa12.47□□□□□ -0.41
CAPN1-205ENST00000526954 TRAV25A0A0B4J276 109 aa12.46□□□□□ -0.41
CAPN1-205ENST00000526954 IGHV3-66A0A0C4DH42 116 aa12.46□□□□□ -0.41
CAPN1-205ENST00000526954 SPP1P10451 314 aa12.46□□□□□ -0.41
CAPN1-205ENST00000526954 CD300EQ496F6 205 aaPredicted RBP12.46□□□□□ -0.41
CAPN1-205ENST00000526954 GCSAMLQ5JQS6 135 aa12.46□□□□□ -0.41
CAPN1-205ENST00000526954 SLC51BQ86UW2 128 aa12.46□□□□□ -0.41
CAPN1-205ENST00000526954 SLC25A32Q9H2D1 315 aa12.46□□□□□ -0.41
CAPN1-205ENST00000526954 TPT1P13693 172 aaKnown RBP12.45□□□□□ -0.42
CAPN1-205ENST00000526954 M6PRP20645 277 aa12.45□□□□□ -0.42
CAPN1-205ENST00000526954 ACOT6Q3I5F7 207 aaPredicted RBP12.45□□□□□ -0.42
CAPN1-205ENST00000526954 TCF24Q7RTU0 167 aa12.45□□□□□ -0.42
CAPN1-205ENST00000526954 BAP18Q8IXM2 172 aa12.45□□□□□ -0.42
CAPN1-205ENST00000526954 SCRT1Q9BWW7 348 aa12.45□□□□□ -0.42
CAPN1-205ENST00000526954 HELTA6NFD8 242 aa12.44□□□□□ -0.42
CAPN1-205ENST00000526954 TSPAN4O14817 238 aa12.44□□□□□ -0.42
CAPN1-205ENST00000526954 MBP02144 154 aa12.44□□□□□ -0.42
CAPN1-205ENST00000526954 SEC11BP0C7V7 166 aa12.44□□□□□ -0.42
CAPN1-205ENST00000526954 EGFEM1PQ0D2K5 195 aa12.44□□□□□ -0.42
CAPN1-205ENST00000526954 MORN5Q5VZ52 161 aa12.44□□□□□ -0.42
CAPN1-205ENST00000526954 LCN12Q6JVE5 192 aa12.44□□□□□ -0.42
CAPN1-205ENST00000526954 TMEM61Q8N0U2 210 aa12.44□□□□□ -0.42
CAPN1-205ENST00000526954 OR8I2Q8N0Y5 310 aa12.44□□□□□ -0.42
CAPN1-205ENST00000526954 GPR82Q96P67 336 aa12.44□□□□□ -0.42
CAPN1-205ENST00000526954 MRPL32Q9BYC8 188 aaKnown RBP12.44□□□□□ -0.42
CAPN1-205ENST00000526954 G3V4G9 280 aa12.43□□□□□ -0.42
CAPN1-205ENST00000526954 BOLA2-SMG1P6H3BVE0 249 aa12.43□□□□□ -0.42
CAPN1-205ENST00000526954 FAM78BQ5VT40 261 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms