RNA–Protein interactions for RNA: ENST00000526216.1

COLCA2-202, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-202ENST00000526216 FAM78BQ5VT40 261 aa11.04□□□□□ -0.64
COLCA2-202ENST00000526216 C10orf113Q5VZT2 155 aa11.04□□□□□ -0.64
COLCA2-202ENST00000526216 LCN15Q6UWW0 184 aa11.04□□□□□ -0.64
COLCA2-202ENST00000526216 GATAD1Q8WUU5 269 aa11.04□□□□□ -0.64
COLCA2-202ENST00000526216 C4orf3Q8WVX3 66 aa11.04□□□□□ -0.64
COLCA2-202ENST00000526216 ZNF503Q96F45 646 aa11.04□□□□□ -0.64
COLCA2-202ENST00000526216 FAM167A-AS1Q96KT0 104 aa11.04□□□□□ -0.64
COLCA2-202ENST00000526216 MAP1LC3B2A6NCE7 125 aa11.03□□□□□ -0.64
COLCA2-202ENST00000526216 H3BRN7 92 aa11.03□□□□□ -0.64
COLCA2-202ENST00000526216 SCGB2A1O75556 95 aa11.03□□□□□ -0.64
COLCA2-202ENST00000526216 H2AFB1P0C5Y9 115 aa11.03□□□□□ -0.64
COLCA2-202ENST00000526216 STAG3L2P0CL84 134 aa11.03□□□□□ -0.64
COLCA2-202ENST00000526216 STAG3L3P0CL85 134 aa11.03□□□□□ -0.64
COLCA2-202ENST00000526216 RHOBP62745 196 aa11.03□□□□□ -0.64
COLCA2-202ENST00000526216 RELQ04864 619 aaPredicted RBP11.03□□□□□ -0.64
COLCA2-202ENST00000526216 KHDC1LQ5JSQ8 128 aa11.03□□□□□ -0.64
COLCA2-202ENST00000526216 KLHL30-AS1Q8NEE0 82 aa11.03□□□□□ -0.64
COLCA2-202ENST00000526216 WFDC12Q8WWY7 111 aa11.03□□□□□ -0.64
COLCA2-202ENST00000526216 DUX3Q96PT4 197 aa11.03□□□□□ -0.64
COLCA2-202ENST00000526216 PFDN5Q99471 154 aa11.03□□□□□ -0.64
COLCA2-202ENST00000526216 SCRT1Q9BWW7 348 aa11.03□□□□□ -0.64
COLCA2-202ENST00000526216 MAP1LC3BQ9GZQ8 125 aa11.03□□□□□ -0.64
COLCA2-202ENST00000526216 HIGD1AQ9Y241 93 aa11.03□□□□□ -0.64
COLCA2-202ENST00000526216 ELOA3CA0A087WX78 387 aaPredicted RBP11.02□□□□□ -0.65
COLCA2-202ENST00000526216 NDUFA4O00483 81 aa11.02□□□□□ -0.65
COLCA2-202ENST00000526216 ZNF207O43670 478 aaKnown RBP11.02□□□□□ -0.65
COLCA2-202ENST00000526216 HSPB1P04792 205 aaKnown RBP11.02□□□□□ -0.65
COLCA2-202ENST00000526216 EDN2P20800 178 aa11.02□□□□□ -0.65
COLCA2-202ENST00000526216 RAB14P61106 215 aa11.02□□□□□ -0.65
COLCA2-202ENST00000526216 LEMD1Q68G75 181 aa11.02□□□□□ -0.65
COLCA2-202ENST00000526216 C8orf86Q6ZUL3 223 aa11.02□□□□□ -0.65
COLCA2-202ENST00000526216 LINC00305Q7Z4B0 112 aa11.02□□□□□ -0.65
COLCA2-202ENST00000526216 SFT2D1Q8WV19 159 aa11.02□□□□□ -0.65
COLCA2-202ENST00000526216 TMEM190Q8WZ59 177 aa11.02□□□□□ -0.65
COLCA2-202ENST00000526216 C19orf24Q9BVV8 132 aa11.02□□□□□ -0.65
COLCA2-202ENST00000526216 SLC25A2Q9BXI2 301 aa11.02□□□□□ -0.65
COLCA2-202ENST00000526216 MRPL32Q9BYC8 188 aaKnown RBP11.02□□□□□ -0.65
COLCA2-202ENST00000526216 SLC25A39Q9BZJ4 359 aaPredicted RBP11.02□□□□□ -0.65
COLCA2-202ENST00000526216 HRH4Q9H3N8 390 aa11.02□□□□□ -0.65
COLCA2-202ENST00000526216 TMPRSS5Q9H3S3 457 aa11.02□□□□□ -0.65
COLCA2-202ENST00000526216 TRAV1-1A0A0B4J248 108 aa11.01□□□□□ -0.65
COLCA2-202ENST00000526216 A0A1B0GUS0 222 aa11.01□□□□□ -0.65
COLCA2-202ENST00000526216 A0A1W2PPV4 95 aa11.01□□□□□ -0.65
COLCA2-202ENST00000526216 A0A1W2PRX2 142 aa11.01□□□□□ -0.65
COLCA2-202ENST00000526216 LINC00862A6NCI5 91 aa11.01□□□□□ -0.65
COLCA2-202ENST00000526216 APOHP02749 345 aaPredicted RBP11.01□□□□□ -0.65
COLCA2-202ENST00000526216 RNF2Q99496 336 aa11.01□□□□□ -0.65
COLCA2-202ENST00000526216 SHANK2-AS3Q9BTD1 123 aa11.01□□□□□ -0.65
COLCA2-202ENST00000526216 TSSC4Q9Y5U2 329 aaPredicted RBP11.01□□□□□ -0.65
COLCA2-202ENST00000526216 U3KQE9 123 aa11.01□□□□□ -0.65
COLCA2-202ENST00000526216 ARL14EPLP0DKL9 152 aa11□□□□□ -0.65
COLCA2-202ENST00000526216 C8orf88P0DMB2 117 aa11□□□□□ -0.65
COLCA2-202ENST00000526216 HOXD3P31249 432 aaPredicted RBP11□□□□□ -0.65
COLCA2-202ENST00000526216 SLURP1P55000 103 aa11□□□□□ -0.65
COLCA2-202ENST00000526216 AWAT1Q58HT5 328 aa11□□□□□ -0.65
COLCA2-202ENST00000526216 GPHB5Q86YW7 130 aa11□□□□□ -0.65
COLCA2-202ENST00000526216 RAX2Q96IS3 184 aa11□□□□□ -0.65
COLCA2-202ENST00000526216 RABAC1Q9UI14 185 aa11□□□□□ -0.65
COLCA2-202ENST00000526216 ZNF98A6NK75 572 aa10.99□□□□□ -0.65
COLCA2-202ENST00000526216 NUDT19A8MXV4 375 aa10.99□□□□□ -0.65
COLCA2-202ENST00000526216 MRPS12O15235 138 aaKnown RBP10.99□□□□□ -0.65
COLCA2-202ENST00000526216 PYYP10082 97 aa10.99□□□□□ -0.65
COLCA2-202ENST00000526216 FOXL1Q12952 345 aa10.99□□□□□ -0.65
COLCA2-202ENST00000526216 OR11H1Q8NG94 326 aa10.99□□□□□ -0.65
COLCA2-202ENST00000526216 OR1N2Q8NGR9 330 aa10.99□□□□□ -0.65
COLCA2-202ENST00000526216 C20orf24Q9BUV8 137 aa10.99□□□□□ -0.65
COLCA2-202ENST00000526216 TECRQ9NZ01 308 aaKnown RBP10.99□□□□□ -0.65
COLCA2-202ENST00000526216 IGHV3-49A0A0A0MS15 119 aa10.98□□□□□ -0.65
COLCA2-202ENST00000526216 LINC01619G3V211 115 aa10.98□□□□□ -0.65
COLCA2-202ENST00000526216 GP9P14770 177 aa10.98□□□□□ -0.65
COLCA2-202ENST00000526216 CRYBB3P26998 211 aa10.98□□□□□ -0.65
COLCA2-202ENST00000526216 GCHFRP30047 84 aa10.98□□□□□ -0.65
COLCA2-202ENST00000526216 FHL3Q13643 280 aa10.98□□□□□ -0.65
COLCA2-202ENST00000526216 KLF5Q13887 457 aaPredicted RBP10.98□□□□□ -0.65
COLCA2-202ENST00000526216 RPEL1Q2QD12 228 aa10.98□□□□□ -0.65
COLCA2-202ENST00000526216 TM4SF20Q53R12 229 aa10.98□□□□□ -0.65
COLCA2-202ENST00000526216 REC114Q7Z4M0 266 aa10.98□□□□□ -0.65
COLCA2-202ENST00000526216 SLC7A5P1Q8MH63 180 aa10.98□□□□□ -0.65
COLCA2-202ENST00000526216 MED9Q9NWA0 146 aa10.98□□□□□ -0.65
COLCA2-202ENST00000526216 FBN1P35555 2871 aaKnown RBP10.98□□□□□ -0.65
COLCA2-202ENST00000526216 TENM1Q9UKZ4 2725 aa10.97□□□□□ -0.65
COLCA2-202ENST00000526216 IGHV3OR16-13A0A075B7E8 117 aa10.97□□□□□ -0.65
COLCA2-202ENST00000526216 IGHV3-74A0A0B4J1X5 117 aa10.97□□□□□ -0.65
COLCA2-202ENST00000526216 IGHV3-66A0A0C4DH42 116 aa10.97□□□□□ -0.65
COLCA2-202ENST00000526216 TMEM213A2RRL7 107 aa10.97□□□□□ -0.65
COLCA2-202ENST00000526216 CXorf1O96002 111 aa10.97□□□□□ -0.65
COLCA2-202ENST00000526216 HBE1P02100 147 aa10.97□□□□□ -0.65
COLCA2-202ENST00000526216 RIPPLY3P57055 190 aa10.97□□□□□ -0.65
COLCA2-202ENST00000526216 SYNJ2BPP57105 145 aa10.97□□□□□ -0.65
COLCA2-202ENST00000526216 KHDC3LQ587J8 217 aa10.97□□□□□ -0.65
COLCA2-202ENST00000526216 COMMD7Q86VX2 200 aa10.97□□□□□ -0.65
COLCA2-202ENST00000526216 SUN5Q8TC36 379 aa10.97□□□□□ -0.65
COLCA2-202ENST00000526216 FXYD5Q96DB9 178 aa10.97□□□□□ -0.65
COLCA2-202ENST00000526216 C17orf77Q96MU5 243 aa10.97□□□□□ -0.65
COLCA2-202ENST00000526216 ATRQ13535 2644 aa10.96□□□□□ -0.65
COLCA2-202ENST00000526216 ZNF320A2RRD8 509 aa10.96□□□□□ -0.65
COLCA2-202ENST00000526216 BUB3O43684 328 aa10.96□□□□□ -0.65
COLCA2-202ENST00000526216 OR7C2O60412 319 aa10.96□□□□□ -0.65
COLCA2-202ENST00000526216 SNRPCP09234 159 aaKnown RBP10.96□□□□□ -0.65
COLCA2-202ENST00000526216 SRSF3P84103 164 aaKnown RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms