RNA–Protein interactions for RNA: ENST00000526054.5

VPS28-204, Transcript of VPS28, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS28, Length 892 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-204ENST00000526054 PLECQ15149 4684 aaKnown RBP7.6□□□□□ -1.19
VPS28-204ENST00000526054 IGKV1OR2-108A0A075B7D4 117 aa7.6□□□□□ -1.19
VPS28-204ENST00000526054 IGHV3-49A0A0A0MS15 119 aa7.6□□□□□ -1.19
VPS28-204ENST00000526054 IGSF23A1L1A6 192 aa7.6□□□□□ -1.19
VPS28-204ENST00000526054 IZUMO1RA6ND01 250 aa7.6□□□□□ -1.19
VPS28-204ENST00000526054 H0YIZ8 118 aa7.6□□□□□ -1.19
VPS28-204ENST00000526054 CD5P06127 495 aa7.6□□□□□ -1.19
VPS28-204ENST00000526054 CRYBB3P26998 211 aa7.6□□□□□ -1.19
VPS28-204ENST00000526054 S100A11P31949 105 aa7.6□□□□□ -1.19
VPS28-204ENST00000526054 NKX2-5P52952 324 aaPredicted RBP7.6□□□□□ -1.19
VPS28-204ENST00000526054 CD81P60033 236 aa7.6□□□□□ -1.19
VPS28-204ENST00000526054 LYZP61626 148 aa7.6□□□□□ -1.19
VPS28-204ENST00000526054 ZNF90Q03938 601 aa7.6□□□□□ -1.19
VPS28-204ENST00000526054 BAXQ07812 192 aa7.6□□□□□ -1.19
VPS28-204ENST00000526054 ARL16Q0P5N6 197 aa7.6□□□□□ -1.19
VPS28-204ENST00000526054 OR2F1Q13607 317 aa7.6□□□□□ -1.19
VPS28-204ENST00000526054 TEPPQ6URK8 271 aa7.6□□□□□ -1.19
VPS28-204ENST00000526054 TMEM217Q8N7C4 229 aa7.6□□□□□ -1.19
VPS28-204ENST00000526054 BPIFCQ8NFQ6 507 aa7.6□□□□□ -1.19
VPS28-204ENST00000526054 OR11H4Q8NGC9 324 aa7.6□□□□□ -1.19
VPS28-204ENST00000526054 RNF125Q96EQ8 232 aa7.6□□□□□ -1.19
VPS28-204ENST00000526054 RNF126Q9BV68 326 aa7.6□□□□□ -1.19
VPS28-204ENST00000526054 PBDC1Q9BVG4 233 aa7.6□□□□□ -1.19
VPS28-204ENST00000526054 TMEM147Q9BVK8 224 aa7.6□□□□□ -1.19
VPS28-204ENST00000526054 VSIRQ9H7M9 311 aa7.6□□□□□ -1.19
VPS28-204ENST00000526054 RETNQ9HD89 108 aa7.6□□□□□ -1.19
VPS28-204ENST00000526054 RABAC1Q9UI14 185 aa7.6□□□□□ -1.19
VPS28-204ENST00000526054 TNFSF18Q9UNG2 199 aa7.6□□□□□ -1.19
VPS28-204ENST00000526054 IGHV3OR16-13A0A075B7E8 117 aa7.59□□□□□ -1.19
VPS28-204ENST00000526054 IGHV3-74A0A0B4J1X5 117 aa7.59□□□□□ -1.19
VPS28-204ENST00000526054 TSPAN4O14817 238 aa7.59□□□□□ -1.19
VPS28-204ENST00000526054 C4BPBP20851 252 aa7.59□□□□□ -1.19
VPS28-204ENST00000526054 S100A7P31151 101 aa7.59□□□□□ -1.19
VPS28-204ENST00000526054 SELENOTP62341 195 aa7.59□□□□□ -1.19
VPS28-204ENST00000526054 EWSR1Q01844 656 aaKnown RBP eCLIP7.59□□□□□ -1.19
VPS28-204ENST00000526054 ZNF345Q14585 488 aa7.59□□□□□ -1.19
VPS28-204ENST00000526054 USF2Q15853 346 aaPredicted RBP7.59□□□□□ -1.19
VPS28-204ENST00000526054 ATP6V1FQ16864 119 aa7.59□□□□□ -1.19
VPS28-204ENST00000526054 CYP2G1PQ6ZSU1 146 aa7.59□□□□□ -1.19
VPS28-204ENST00000526054 C9orf62Q8N4C0 152 aa7.59□□□□□ -1.19
VPS28-204ENST00000526054 ST8SIA2Q92186 375 aa7.59□□□□□ -1.19
VPS28-204ENST00000526054 RNF2Q99496 336 aa7.59□□□□□ -1.19
VPS28-204ENST00000526054 SPAG8Q99932 426 aaPredicted RBP7.59□□□□□ -1.19
VPS28-204ENST00000526054 MFFQ9GZY8 342 aa7.59□□□□□ -1.19
VPS28-204ENST00000526054 UQCC1Q9NVA1 299 aa7.59□□□□□ -1.19
VPS28-204ENST00000526054 SELENOKQ9Y6D0 94 aa7.59□□□□□ -1.19
VPS28-204ENST00000526054 IGHV3-66A0A0C4DH42 116 aa7.58□□□□□ -1.2
VPS28-204ENST00000526054 UBE2L5PA0A1B0GUS4 154 aa7.58□□□□□ -1.2
VPS28-204ENST00000526054 OR4C46A6NHA9 309 aa7.58□□□□□ -1.2
VPS28-204ENST00000526054 ZNF785A8K8V0 405 aa7.58□□□□□ -1.2
VPS28-204ENST00000526054 JTBO76095 146 aa7.58□□□□□ -1.2
VPS28-204ENST00000526054 APOHP02749 345 aaPredicted RBP7.58□□□□□ -1.2
VPS28-204ENST00000526054 RAB31Q13636 194 aa7.58□□□□□ -1.2
VPS28-204ENST00000526054 VWC2Q2TAL6 325 aa7.58□□□□□ -1.2
VPS28-204ENST00000526054 TCF24Q7RTU0 167 aa7.58□□□□□ -1.2
VPS28-204ENST00000526054 AQP10Q96PS8 301 aa7.58□□□□□ -1.2
VPS28-204ENST00000526054 FAM110AQ9BQ89 295 aa7.58□□□□□ -1.2
VPS28-204ENST00000526054 HSPB11Q9Y547 144 aa7.58□□□□□ -1.2
VPS28-204ENST00000526054 A0A0D9SG52 128 aa7.57□□□□□ -1.2
VPS28-204ENST00000526054 HELTA6NFD8 242 aa7.57□□□□□ -1.2
VPS28-204ENST00000526054 LINC00869P0C866 280 aa7.57□□□□□ -1.2
VPS28-204ENST00000526054 CXCL2P19875 107 aa7.57□□□□□ -1.2
VPS28-204ENST00000526054 RPL12P30050 165 aaKnown RBP7.57□□□□□ -1.2
VPS28-204ENST00000526054 AP2S1P53680 142 aaPredicted RBP7.57□□□□□ -1.2
VPS28-204ENST00000526054 RPL11P62913 178 aaKnown RBP7.57□□□□□ -1.2
VPS28-204ENST00000526054 PAFAH1B2P68402 229 aa7.57□□□□□ -1.2
VPS28-204ENST00000526054 S100A7AQ86SG5 101 aa7.57□□□□□ -1.2
VPS28-204ENST00000526054 KCNRGQ8N5I3 272 aa7.57□□□□□ -1.2
VPS28-204ENST00000526054 OR5C1Q8NGR4 320 aa7.57□□□□□ -1.2
VPS28-204ENST00000526054 IL17DQ8TAD2 202 aa7.57□□□□□ -1.2
VPS28-204ENST00000526054 SLC45A2Q9UMX9 530 aa7.57□□□□□ -1.2
VPS28-204ENST00000526054 WDR83OSQ9Y284 106 aa7.57□□□□□ -1.2
VPS28-204ENST00000526054 U3KQE9 123 aa7.57□□□□□ -1.2
VPS28-204ENST00000526054 IGKV3-7A0A075B6H7 116 aa7.56□□□□□ -1.2
VPS28-204ENST00000526054 KANTRA0A1W2PQU2 76 aa7.56□□□□□ -1.2
VPS28-204ENST00000526054 RNF222A6NCQ9 220 aa7.56□□□□□ -1.2
VPS28-204ENST00000526054 AGPAT2O15120 278 aa7.56□□□□□ -1.2
VPS28-204ENST00000526054 MPDU1O75352 247 aa7.56□□□□□ -1.2
VPS28-204ENST00000526054 DFFBO76075 338 aa7.56□□□□□ -1.2
VPS28-204ENST00000526054 CD7P09564 240 aa7.56□□□□□ -1.2
VPS28-204ENST00000526054 ORM2P19652 201 aa7.56□□□□□ -1.2
VPS28-204ENST00000526054 GATA2P23769 480 aaPredicted RBP7.56□□□□□ -1.2
VPS28-204ENST00000526054 CAMLGP49069 296 aa7.56□□□□□ -1.2
VPS28-204ENST00000526054 NHLH2Q02577 135 aa7.56□□□□□ -1.2
VPS28-204ENST00000526054 CLINT1Q14677 625 aa7.56□□□□□ -1.2
VPS28-204ENST00000526054 LGALSLQ3ZCW2 172 aaPredicted RBP7.56□□□□□ -1.2
VPS28-204ENST00000526054 PXDC1Q5TGL8 231 aa7.56□□□□□ -1.2
VPS28-204ENST00000526054 FAM90A2PQ658T7 463 aa7.56□□□□□ -1.2
VPS28-204ENST00000526054 C16orf54Q6UWD8 224 aa7.56□□□□□ -1.2
VPS28-204ENST00000526054 TMUB2Q71RG4 321 aa7.56□□□□□ -1.2
VPS28-204ENST00000526054 OR1B1Q8NGR6 318 aa7.56□□□□□ -1.2
VPS28-204ENST00000526054 MGST2Q99735 147 aa7.56□□□□□ -1.2
VPS28-204ENST00000526054 WFDC10AQ9H1F0 79 aa7.56□□□□□ -1.2
VPS28-204ENST00000526054 SRD5A3Q9H8P0 318 aa7.56□□□□□ -1.2
VPS28-204ENST00000526054 FBXL17Q9UF56 701 aa7.56□□□□□ -1.2
VPS28-204ENST00000526054 TRAV2A0A0B4J234 112 aa7.55□□□□□ -1.2
VPS28-204ENST00000526054 DNASE2O00115 360 aaPredicted RBP7.55□□□□□ -1.2
VPS28-204ENST00000526054 BCL2L11O43521 198 aa7.55□□□□□ -1.2
VPS28-204ENST00000526054 BUB3O43684 328 aa7.55□□□□□ -1.2
VPS28-204ENST00000526054 HYPMO75409 117 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms