RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 PRR20BP86481 221 aa15.61■□□□□ 0.09
CD44-222ENST00000526025 PRR20AP86496 221 aa15.61■□□□□ 0.09
CD44-222ENST00000526025 C16orf54Q6UWD8 224 aa15.61■□□□□ 0.09
CD44-222ENST00000526025 WDR61Q9GZS3 305 aaKnown RBP15.61■□□□□ 0.09
CD44-222ENST00000526025 KCNIP2Q9NS61 270 aa15.61■□□□□ 0.09
CD44-222ENST00000526025 HYPMO75409 117 aa15.6■□□□□ 0.09
CD44-222ENST00000526025 GLMPQ8WWB7 406 aa15.6■□□□□ 0.09
CD44-222ENST00000526025 NEURL2Q9BR09 285 aa15.6■□□□□ 0.09
CD44-222ENST00000526025 NPCDR1Q9BY65 106 aa15.6■□□□□ 0.09
CD44-222ENST00000526025 RNF24Q9Y225 148 aa15.6■□□□□ 0.09
CD44-222ENST00000526025 IGHV3OR16-13A0A075B7E8 117 aa15.59■□□□□ 0.09
CD44-222ENST00000526025 IGHV3-74A0A0B4J1X5 117 aa15.59■□□□□ 0.09
CD44-222ENST00000526025 TRAV2A0A0B4J234 112 aa15.59■□□□□ 0.09
CD44-222ENST00000526025 RNF222A6NCQ9 220 aa15.59■□□□□ 0.09
CD44-222ENST00000526025 HELTA6NFD8 242 aa15.59■□□□□ 0.09
CD44-222ENST00000526025 IFNA5P01569 189 aa15.59■□□□□ 0.09
CD44-222ENST00000526025 TCF24Q7RTU0 167 aa15.59■□□□□ 0.09
CD44-222ENST00000526025 STPG3Q8N7X2 389 aa15.59■□□□□ 0.09
CD44-222ENST00000526025 FBXL17Q9UF56 701 aa15.59■□□□□ 0.09
CD44-222ENST00000526025 ELOA3CA0A087WX78 387 aaPredicted RBP15.58■□□□□ 0.08
CD44-222ENST00000526025 HMSDA8MTL9 139 aa15.58■□□□□ 0.08
CD44-222ENST00000526025 ORM2P19652 201 aa15.58■□□□□ 0.08
CD44-222ENST00000526025 AP2S1P53680 142 aaPredicted RBP15.58■□□□□ 0.08
CD44-222ENST00000526025 DEFA6Q01524 100 aa15.58■□□□□ 0.08
CD44-222ENST00000526025 ZNF266Q14584 549 aa15.58■□□□□ 0.08
CD44-222ENST00000526025 TCTE3Q8IZS6 198 aa15.58■□□□□ 0.08
CD44-222ENST00000526025 OR1B1Q8NGR6 318 aa15.58■□□□□ 0.08
CD44-222ENST00000526025 ST6GAL2Q96JF0 529 aa15.58■□□□□ 0.08
CD44-222ENST00000526025 PRR25Q96S07 402 aa15.58■□□□□ 0.08
CD44-222ENST00000526025 HIGD1AQ9Y241 93 aa15.58■□□□□ 0.08
CD44-222ENST00000526025 IGHV3-66A0A0C4DH42 116 aa15.57■□□□□ 0.08
CD44-222ENST00000526025 OR4C46A6NHA9 309 aa15.57■□□□□ 0.08
CD44-222ENST00000526025 B2MP61769 119 aa15.57■□□□□ 0.08
CD44-222ENST00000526025 PAFAH1B2P68402 229 aa15.57■□□□□ 0.08
CD44-222ENST00000526025 GUCA2BQ16661 112 aa15.57■□□□□ 0.08
CD44-222ENST00000526025 Q6ZRG5 221 aa15.57■□□□□ 0.08
CD44-222ENST00000526025 GTSCR1Q86UQ5 136 aa15.57■□□□□ 0.08
CD44-222ENST00000526025 PPP1R14BQ96C90 147 aa15.57■□□□□ 0.08
CD44-222ENST00000526025 SHANK2-AS3Q9BTD1 123 aa15.57■□□□□ 0.08
CD44-222ENST00000526025 SMIM3Q9BZL3 60 aa15.57■□□□□ 0.08
CD44-222ENST00000526025 ARL6Q9H0F7 186 aa15.57■□□□□ 0.08
CD44-222ENST00000526025 WFDC1Q9HC57 220 aa15.57■□□□□ 0.08
CD44-222ENST00000526025 SLC39A9Q9NUM3 307 aa15.57■□□□□ 0.08
CD44-222ENST00000526025 C17orf112F2Z3M2 114 aa15.56■□□□□ 0.08
CD44-222ENST00000526025 H3BRN7 92 aa15.56■□□□□ 0.08
CD44-222ENST00000526025 ZNF345Q14585 488 aa15.56■□□□□ 0.08
CD44-222ENST00000526025 MIC13Q5XKP0 118 aa15.56■□□□□ 0.08
CD44-222ENST00000526025 ZNF709Q8N972 641 aa15.56■□□□□ 0.08
CD44-222ENST00000526025 OR1L4Q8NGR5 311 aa15.56■□□□□ 0.08
CD44-222ENST00000526025 SCGB1C1Q8TD33 95 aa15.56■□□□□ 0.08
CD44-222ENST00000526025 GPR82Q96P67 336 aa15.56■□□□□ 0.08
CD44-222ENST00000526025 PFDN5Q99471 154 aa15.56■□□□□ 0.08
CD44-222ENST00000526025 FAM110AQ9BQ89 295 aa15.56■□□□□ 0.08
CD44-222ENST00000526025 PXMP4Q9Y6I8 212 aa15.56■□□□□ 0.08
CD44-222ENST00000526025 ZNF98A6NK75 572 aa15.55■□□□□ 0.08
CD44-222ENST00000526025 PATE2Q6UY27 113 aa15.55■□□□□ 0.08
CD44-222ENST00000526025 SIGLEC15Q6ZMC9 328 aa15.55■□□□□ 0.08
CD44-222ENST00000526025 SLC25A39Q9BZJ4 359 aaPredicted RBP15.55■□□□□ 0.08
CD44-222ENST00000526025 ARV1Q9H2C2 271 aa15.55■□□□□ 0.08
CD44-222ENST00000526025 DOK5Q9P104 306 aa15.55■□□□□ 0.08
CD44-222ENST00000526025 SMLR1H3BR10 107 aa15.54■□□□□ 0.08
CD44-222ENST00000526025 K7EIL1 84 aa15.54■□□□□ 0.08
CD44-222ENST00000526025 TAAR5O14804 337 aa15.54■□□□□ 0.08
CD44-222ENST00000526025 ARPC5O15511 151 aa15.54■□□□□ 0.08
CD44-222ENST00000526025 COX7A2P2O60397 106 aa15.54■□□□□ 0.08
CD44-222ENST00000526025 PRB2P02812 416 aaPredicted RBP15.54■□□□□ 0.08
CD44-222ENST00000526025 OR5G3P0C626 314 aa15.54■□□□□ 0.08
CD44-222ENST00000526025 Q8N1Y9 231 aa15.54■□□□□ 0.08
CD44-222ENST00000526025 MS4A6AQ9H2W1 248 aa15.54■□□□□ 0.08
CD44-222ENST00000526025 DNAJC4Q9NNZ3 241 aa15.54■□□□□ 0.08
CD44-222ENST00000526025 TIMM9Q9Y5J7 89 aa15.54■□□□□ 0.08
CD44-222ENST00000526025 SELENOKQ9Y6D0 94 aa15.54■□□□□ 0.08
CD44-222ENST00000526025 hCG_2014768A0A024R1R8 64 aa15.53■□□□□ 0.08
CD44-222ENST00000526025 CMC4P56277 68 aaPredicted RBP15.53■□□□□ 0.08
CD44-222ENST00000526025 C10orf113Q5VZT2 155 aa15.53■□□□□ 0.08
CD44-222ENST00000526025 AKAP14Q86UN6 197 aa15.53■□□□□ 0.08
CD44-222ENST00000526025 OR8I2Q8N0Y5 310 aa15.53■□□□□ 0.08
CD44-222ENST00000526025 OR11H4Q8NGC9 324 aa15.53■□□□□ 0.08
CD44-222ENST00000526025 GATAD1Q8WUU5 269 aa15.53■□□□□ 0.08
CD44-222ENST00000526025 TMEM37Q8WXS4 190 aa15.53■□□□□ 0.08
CD44-222ENST00000526025 MFFQ9GZY8 342 aa15.53■□□□□ 0.08
CD44-222ENST00000526025 CD81P60033 236 aa15.52■□□□□ 0.08
CD44-222ENST00000526025 RPL11P62913 178 aaKnown RBP15.52■□□□□ 0.08
CD44-222ENST00000526025 SEPSECSQ9HD40 501 aaKnown RBP15.52■□□□□ 0.08
CD44-222ENST00000526025 NRN1Q9NPD7 142 aa15.52■□□□□ 0.08
CD44-222ENST00000526025 A8MZ25 164 aa15.51■□□□□ 0.07
CD44-222ENST00000526025 RPL7P18124 248 aaKnown RBP15.51■□□□□ 0.07
CD44-222ENST00000526025 GALR1P47211 349 aa15.51■□□□□ 0.07
CD44-222ENST00000526025 SAMD13Q5VXD3 122 aa15.51■□□□□ 0.07
CD44-222ENST00000526025 LINC00305Q7Z4B0 112 aa15.51■□□□□ 0.07
CD44-222ENST00000526025 KCNRGQ8N5I3 272 aa15.51■□□□□ 0.07
CD44-222ENST00000526025 UHRF2Q96PU4 802 aa15.51■□□□□ 0.07
CD44-222ENST00000526025 SCRT1Q9BWW7 348 aa15.51■□□□□ 0.07
CD44-222ENST00000526025 SMAD5-AS1Q9Y6J3 95 aa15.51■□□□□ 0.07
CD44-222ENST00000526025 BORCS7-ASMTA0A0B4J1R7 106 aa15.5■□□□□ 0.07
CD44-222ENST00000526025 A0A0D9SG52 128 aa15.5■□□□□ 0.07
CD44-222ENST00000526025 K7EQG2 157 aa15.5■□□□□ 0.07
CD44-222ENST00000526025 DNASE2O00115 360 aaPredicted RBP15.5■□□□□ 0.07
CD44-222ENST00000526025 CD7P09564 240 aa15.5■□□□□ 0.07
CD44-222ENST00000526025 STXBP6Q8NFX7 210 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms