RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 LINC00052Q96N35 136 aa9.39□□□□□ -0.91
TRAPPC4-205ENST00000525079 WDR12Q9GZL7 423 aaKnown RBP9.39□□□□□ -0.91
TRAPPC4-205ENST00000525079 SLC25A22Q9H936 323 aa9.39□□□□□ -0.91
TRAPPC4-205ENST00000525079 DOK5Q9P104 306 aa9.39□□□□□ -0.91
TRAPPC4-205ENST00000525079 LSM5Q9Y4Y9 91 aaKnown RBP9.39□□□□□ -0.91
TRAPPC4-205ENST00000525079 TENM2Q9NT68 2774 aa9.38□□□□□ -0.91
TRAPPC4-205ENST00000525079 CSMD3Q7Z407 3707 aa9.38□□□□□ -0.91
TRAPPC4-205ENST00000525079 LCE6AA0A183 80 aa9.38□□□□□ -0.91
TRAPPC4-205ENST00000525079 C7orf66A4D0T2 115 aa9.38□□□□□ -0.91
TRAPPC4-205ENST00000525079 CXorf65A6NEN9 183 aa9.38□□□□□ -0.91
TRAPPC4-205ENST00000525079 L7N2F9 121 aa9.38□□□□□ -0.91
TRAPPC4-205ENST00000525079 DEFB4AO15263 64 aa9.38□□□□□ -0.91
TRAPPC4-205ENST00000525079 CFDP00746 253 aaPredicted RBP9.38□□□□□ -0.91
TRAPPC4-205ENST00000525079 IL5P05113 134 aa9.38□□□□□ -0.91
TRAPPC4-205ENST00000525079 GIG44P09565 113 aaPredicted RBP9.38□□□□□ -0.91
TRAPPC4-205ENST00000525079 C4BPBP20851 252 aa9.38□□□□□ -0.91
TRAPPC4-205ENST00000525079 SNRPD3P62318 126 aaKnown RBP9.38□□□□□ -0.91
TRAPPC4-205ENST00000525079 VAMP2P63027 116 aa9.38□□□□□ -0.91
TRAPPC4-205ENST00000525079 IFITM3Q01628 133 aa9.38□□□□□ -0.91
TRAPPC4-205ENST00000525079 ARL16Q0P5N6 197 aa9.38□□□□□ -0.91
TRAPPC4-205ENST00000525079 C1orf194Q5T5A4 169 aa9.38□□□□□ -0.91
TRAPPC4-205ENST00000525079 CYP2G1PQ6ZSU1 146 aa9.38□□□□□ -0.91
TRAPPC4-205ENST00000525079 OR10P1Q8NGE3 313 aa9.38□□□□□ -0.91
TRAPPC4-205ENST00000525079 CLEC5AQ9NY25 188 aa9.38□□□□□ -0.91
TRAPPC4-205ENST00000525079 PTTG2Q9NZH5 202 aa9.38□□□□□ -0.91
TRAPPC4-205ENST00000525079 FBXL17Q9UF56 701 aa9.38□□□□□ -0.91
TRAPPC4-205ENST00000525079 K7EPK0 472 aa9.37□□□□□ -0.91
TRAPPC4-205ENST00000525079 TSC22D2O75157 780 aa9.37□□□□□ -0.91
TRAPPC4-205ENST00000525079 UPK1BO75841 260 aa9.37□□□□□ -0.91
TRAPPC4-205ENST00000525079 BCAP31P51572 246 aa9.37□□□□□ -0.91
TRAPPC4-205ENST00000525079 TAS2R30P59541 319 aa9.37□□□□□ -0.91
TRAPPC4-205ENST00000525079 DLK1P80370 383 aa9.37□□□□□ -0.91
TRAPPC4-205ENST00000525079 MORN3Q6PF18 240 aaPredicted RBP9.37□□□□□ -0.91
TRAPPC4-205ENST00000525079 C2orf50Q96LR7 162 aa9.37□□□□□ -0.91
TRAPPC4-205ENST00000525079 TMEM147Q9BVK8 224 aa9.37□□□□□ -0.91
TRAPPC4-205ENST00000525079 SLC25A32Q9H2D1 315 aa9.37□□□□□ -0.91
TRAPPC4-205ENST00000525079 DYNC2H1Q8NCM8 4307 aaKnown RBP9.37□□□□□ -0.91
TRAPPC4-205ENST00000525079 ZNF98A6NK75 572 aa9.36□□□□□ -0.91
TRAPPC4-205ENST00000525079 IGKV3-20P01619 116 aa9.36□□□□□ -0.91
TRAPPC4-205ENST00000525079 SPP1P10451 314 aa9.36□□□□□ -0.91
TRAPPC4-205ENST00000525079 ID1P41134 155 aa9.36□□□□□ -0.91
TRAPPC4-205ENST00000525079 SLC38A11Q08AI6 406 aa9.36□□□□□ -0.91
TRAPPC4-205ENST00000525079 GDF5OSQ5U4N7 250 aa9.36□□□□□ -0.91
TRAPPC4-205ENST00000525079 ENKURQ8TC29 256 aa9.36□□□□□ -0.91
TRAPPC4-205ENST00000525079 RSG1Q9BU20 258 aa9.36□□□□□ -0.91
TRAPPC4-205ENST00000525079 SCRT1Q9BWW7 348 aa9.36□□□□□ -0.91
TRAPPC4-205ENST00000525079 NPVFQ9HCQ7 196 aa9.36□□□□□ -0.91
TRAPPC4-205ENST00000525079 SEPSECSQ9HD40 501 aaKnown RBP9.36□□□□□ -0.91
TRAPPC4-205ENST00000525079 MGAT4CQ9UBM8 478 aa9.36□□□□□ -0.91
TRAPPC4-205ENST00000525079 RYR3Q15413 4870 aa9.36□□□□□ -0.91
TRAPPC4-205ENST00000525079 FAM24AA6NFZ4 105 aa9.35□□□□□ -0.91
TRAPPC4-205ENST00000525079 H3BMM0 161 aa9.35□□□□□ -0.91
TRAPPC4-205ENST00000525079 SOCS3O14543 225 aa9.35□□□□□ -0.91
TRAPPC4-205ENST00000525079 HYPMO75409 117 aa9.35□□□□□ -0.91
TRAPPC4-205ENST00000525079 OR5G3P0C626 314 aa9.35□□□□□ -0.91
TRAPPC4-205ENST00000525079 LINC00869P0C866 280 aa9.35□□□□□ -0.91
TRAPPC4-205ENST00000525079 CAV2P51636 162 aa9.35□□□□□ -0.91
TRAPPC4-205ENST00000525079 S100A10P60903 97 aa9.35□□□□□ -0.91
TRAPPC4-205ENST00000525079 TMEM217Q8N7C4 229 aa9.35□□□□□ -0.91
TRAPPC4-205ENST00000525079 C17orf77Q96MU5 243 aa9.35□□□□□ -0.91
TRAPPC4-205ENST00000525079 STARD9Q9P2P6 4700 aa9.35□□□□□ -0.91
TRAPPC4-205ENST00000525079 SLC45A2Q9UMX9 530 aa9.35□□□□□ -0.91
TRAPPC4-205ENST00000525079 F6UB75 175 aa9.34□□□□□ -0.91
TRAPPC4-205ENST00000525079 H3BRN7 92 aa9.34□□□□□ -0.91
TRAPPC4-205ENST00000525079 CST7O76096 145 aa9.34□□□□□ -0.91
TRAPPC4-205ENST00000525079 HLA-DRB4P13762 266 aa9.34□□□□□ -0.91
TRAPPC4-205ENST00000525079 GALR1P47211 349 aa9.34□□□□□ -0.91
TRAPPC4-205ENST00000525079 PSMB3P49720 205 aa9.34□□□□□ -0.91
TRAPPC4-205ENST00000525079 FXYD7P58549 80 aa9.34□□□□□ -0.91
TRAPPC4-205ENST00000525079 NANOS2P60321 138 aaKnown RBP9.34□□□□□ -0.91
TRAPPC4-205ENST00000525079 RAP2BP61225 183 aa9.34□□□□□ -0.91
TRAPPC4-205ENST00000525079 RAB32Q13637 225 aa9.34□□□□□ -0.91
TRAPPC4-205ENST00000525079 TEPPQ6URK8 271 aa9.34□□□□□ -0.91
TRAPPC4-205ENST00000525079 NRARPQ7Z6K4 114 aa9.34□□□□□ -0.91
TRAPPC4-205ENST00000525079 C16orf92Q96LL3 132 aa9.34□□□□□ -0.91
TRAPPC4-205ENST00000525079 C20orf173Q96LM9 149 aa9.34□□□□□ -0.91
TRAPPC4-205ENST00000525079 UHRF2Q96PU4 802 aa9.34□□□□□ -0.91
TRAPPC4-205ENST00000525079 SLC25A39Q9BZJ4 359 aaPredicted RBP9.34□□□□□ -0.91
TRAPPC4-205ENST00000525079 ARL6Q9H0F7 186 aa9.34□□□□□ -0.91
TRAPPC4-205ENST00000525079 C11orf1Q9H5F2 150 aa9.34□□□□□ -0.91
TRAPPC4-205ENST00000525079 XCL2Q9UBD3 114 aa9.34□□□□□ -0.91
TRAPPC4-205ENST00000525079 HIGD1AQ9Y241 93 aa9.34□□□□□ -0.91
TRAPPC4-205ENST00000525079 HLA-DRB4X5D2U9 266 aa9.34□□□□□ -0.91
TRAPPC4-205ENST00000525079 FNDC10F2Z333 226 aa9.33□□□□□ -0.92
TRAPPC4-205ENST00000525079 AGPAT2O15120 278 aa9.33□□□□□ -0.92
TRAPPC4-205ENST00000525079 DEDDO75618 318 aa9.33□□□□□ -0.92
TRAPPC4-205ENST00000525079 SIX6O95475 246 aa9.33□□□□□ -0.92
TRAPPC4-205ENST00000525079 ATF4P18848 351 aaPredicted RBP9.33□□□□□ -0.92
TRAPPC4-205ENST00000525079 SELENOTP62341 195 aa9.33□□□□□ -0.92
TRAPPC4-205ENST00000525079 FGL1Q08830 312 aa9.33□□□□□ -0.92
TRAPPC4-205ENST00000525079 IL15RAQ13261 267 aa9.33□□□□□ -0.92
TRAPPC4-205ENST00000525079 TMEM41BQ5BJD5 291 aa9.33□□□□□ -0.92
TRAPPC4-205ENST00000525079 IGFL4Q6B9Z1 124 aa9.33□□□□□ -0.92
TRAPPC4-205ENST00000525079 CEMP1Q6PRD7 247 aaPredicted RBP9.33□□□□□ -0.92
TRAPPC4-205ENST00000525079 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.33□□□□□ -0.92
TRAPPC4-205ENST00000525079 PATE2Q6UY27 113 aa9.33□□□□□ -0.92
TRAPPC4-205ENST00000525079 CSNK1G2-AS1Q8NCQ2 148 aa9.33□□□□□ -0.92
TRAPPC4-205ENST00000525079 OR4B1Q8NGF8 309 aa9.33□□□□□ -0.92
TRAPPC4-205ENST00000525079 SHANK2-AS3Q9BTD1 123 aa9.33□□□□□ -0.92
TRAPPC4-205ENST00000525079 SAV1Q9H4B6 383 aaPredicted RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms