RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 COTL1Q14019 142 aa8.25□□□□□ -1.09
TRAPPC4-204ENST00000524797 ETFRF1Q6IPR1 90 aa8.25□□□□□ -1.09
TRAPPC4-204ENST00000524797 WFDC3Q8IUB2 231 aa8.25□□□□□ -1.09
TRAPPC4-204ENST00000524797 STPG3Q8N7X2 389 aa8.25□□□□□ -1.09
TRAPPC4-204ENST00000524797 LRTM2Q8N967 370 aa8.25□□□□□ -1.09
TRAPPC4-204ENST00000524797 DTD1Q8TEA8 209 aa8.25□□□□□ -1.09
TRAPPC4-204ENST00000524797 MGAT4CQ9UBM8 478 aa8.25□□□□□ -1.09
TRAPPC4-204ENST00000524797 A0A1W2PS18 150 aa8.24□□□□□ -1.09
TRAPPC4-204ENST00000524797 PITX3O75364 302 aa8.24□□□□□ -1.09
TRAPPC4-204ENST00000524797 P2RY1P47900 373 aa8.24□□□□□ -1.09
TRAPPC4-204ENST00000524797 AKR1D1P51857 326 aa8.24□□□□□ -1.09
TRAPPC4-204ENST00000524797 RBMS2Q15434 407 aaKnown RBP8.24□□□□□ -1.09
TRAPPC4-204ENST00000524797 DEFB135Q30KP9 77 aa8.24□□□□□ -1.09
TRAPPC4-204ENST00000524797 NPIPB3Q92617 1050 aa8.24□□□□□ -1.09
TRAPPC4-204ENST00000524797 GPN1Q9HCN4 374 aaPredicted RBP8.24□□□□□ -1.09
TRAPPC4-204ENST00000524797 U3KQE9 123 aa8.24□□□□□ -1.09
TRAPPC4-204ENST00000524797 STARD9Q9P2P6 4700 aa8.24□□□□□ -1.09
TRAPPC4-204ENST00000524797 HMSDA8MTL9 139 aa8.23□□□□□ -1.09
TRAPPC4-204ENST00000524797 WRBO00258 174 aa8.23□□□□□ -1.09
TRAPPC4-204ENST00000524797 MEOX2P50222 304 aa8.23□□□□□ -1.09
TRAPPC4-204ENST00000524797 FGL1Q08830 312 aa8.23□□□□□ -1.09
TRAPPC4-204ENST00000524797 PPP1R1AQ13522 171 aa8.23□□□□□ -1.09
TRAPPC4-204ENST00000524797 C21orf62-AS1Q17RA5 79 aa8.23□□□□□ -1.09
TRAPPC4-204ENST00000524797 CFAP161Q6P656 301 aa8.23□□□□□ -1.09
TRAPPC4-204ENST00000524797 ALKAL2Q6UX46 152 aa8.23□□□□□ -1.09
TRAPPC4-204ENST00000524797 FAM24BQ8N5W8 94 aa8.23□□□□□ -1.09
TRAPPC4-204ENST00000524797 Q8WTZ3 238 aa8.23□□□□□ -1.09
TRAPPC4-204ENST00000524797 RNF183Q96D59 192 aa8.23□□□□□ -1.09
TRAPPC4-204ENST00000524797 ACY3Q96HD9 319 aa8.23□□□□□ -1.09
TRAPPC4-204ENST00000524797 TOMM40O96008 361 aa8.23□□□□□ -1.09
TRAPPC4-204ENST00000524797 SLC25A6P12236 298 aa8.23□□□□□ -1.09
TRAPPC4-204ENST00000524797 RPL35P42766 123 aaKnown RBP8.23□□□□□ -1.09
TRAPPC4-204ENST00000524797 RPL11P62913 178 aaKnown RBP8.23□□□□□ -1.09
TRAPPC4-204ENST00000524797 TMUB2Q71RG4 321 aa8.23□□□□□ -1.09
TRAPPC4-204ENST00000524797 NARS2Q96I59 477 aaKnown RBP8.23□□□□□ -1.09
TRAPPC4-204ENST00000524797 RABAC1Q9UI14 185 aa8.23□□□□□ -1.09
TRAPPC4-204ENST00000524797 CSMD3Q7Z407 3707 aa8.22□□□□□ -1.09
TRAPPC4-204ENST00000524797 K7EQG2 157 aa8.22□□□□□ -1.09
TRAPPC4-204ENST00000524797 FABP1P07148 127 aa8.22□□□□□ -1.09
TRAPPC4-204ENST00000524797 ATP5IP56385 69 aaPredicted RBP8.22□□□□□ -1.09
TRAPPC4-204ENST00000524797 DEFB131AP59861 70 aa8.22□□□□□ -1.09
TRAPPC4-204ENST00000524797 UBE2MP61081 183 aaKnown RBP8.22□□□□□ -1.09
TRAPPC4-204ENST00000524797 GSG1LQ6UXU4 331 aa8.22□□□□□ -1.09
TRAPPC4-204ENST00000524797 STXBP6Q8NFX7 210 aa8.22□□□□□ -1.09
TRAPPC4-204ENST00000524797 GRAMD2BQ96HH9 432 aa8.22□□□□□ -1.09
TRAPPC4-204ENST00000524797 NKX6-2Q9C056 277 aaPredicted RBP8.22□□□□□ -1.09
TRAPPC4-204ENST00000524797 SLC25A32Q9H2D1 315 aa8.22□□□□□ -1.09
TRAPPC4-204ENST00000524797 TENM2Q9NT68 2774 aa8.22□□□□□ -1.09
TRAPPC4-204ENST00000524797 A0A0J9YWU9 116 aa8.21□□□□□ -1.09
TRAPPC4-204ENST00000524797 SNRPGP15A8MWD9 76 aa8.21□□□□□ -1.09
TRAPPC4-204ENST00000524797 FAM90A26D6RGX4 464 aa8.21□□□□□ -1.09
TRAPPC4-204ENST00000524797 IFNA4P05014 189 aa8.21□□□□□ -1.09
TRAPPC4-204ENST00000524797 H2AFB1P0C5Y9 115 aa8.21□□□□□ -1.09
TRAPPC4-204ENST00000524797 IAPPP10997 89 aa8.21□□□□□ -1.09
TRAPPC4-204ENST00000524797 GPX4P36969 197 aaPredicted RBP8.21□□□□□ -1.09
TRAPPC4-204ENST00000524797 RAB4BP61018 213 aa8.21□□□□□ -1.09
TRAPPC4-204ENST00000524797 USF2Q15853 346 aaPredicted RBP8.21□□□□□ -1.09
TRAPPC4-204ENST00000524797 ATRAIDQ6UW56 229 aa8.21□□□□□ -1.09
TRAPPC4-204ENST00000524797 LYG2Q86SG7 212 aa8.21□□□□□ -1.09
TRAPPC4-204ENST00000524797 GLMPQ8WWB7 406 aa8.21□□□□□ -1.09
TRAPPC4-204ENST00000524797 ARL6Q9H0F7 186 aa8.21□□□□□ -1.09
TRAPPC4-204ENST00000524797 CSTL1Q9H114 145 aa8.21□□□□□ -1.09
TRAPPC4-204ENST00000524797 BIN3Q9NQY0 253 aa8.21□□□□□ -1.09
TRAPPC4-204ENST00000524797 TMED3Q9Y3Q3 217 aa8.21□□□□□ -1.09
TRAPPC4-204ENST00000524797 AGRNO00468 2067 aa8.21□□□□□ -1.1
TRAPPC4-204ENST00000524797 MED6O75586 246 aa8.21□□□□□ -1.1
TRAPPC4-204ENST00000524797 NDUFB6O95139 128 aa8.21□□□□□ -1.1
TRAPPC4-204ENST00000524797 IL4P05112 153 aa8.21□□□□□ -1.1
TRAPPC4-204ENST00000524797 IL5P05113 134 aa8.21□□□□□ -1.1
TRAPPC4-204ENST00000524797 HOXB5P09067 269 aa8.21□□□□□ -1.1
TRAPPC4-204ENST00000524797 GGNBP1Q5YKI7 109 aa8.21□□□□□ -1.1
TRAPPC4-204ENST00000524797 LEMD1Q68G75 181 aa8.21□□□□□ -1.1
TRAPPC4-204ENST00000524797 SLC35E1Q96K37 410 aa8.21□□□□□ -1.1
TRAPPC4-204ENST00000524797 CHTOPQ9Y3Y2 248 aaKnown RBP8.21□□□□□ -1.1
TRAPPC4-204ENST00000524797 RYR2Q92736 4967 aa8.2□□□□□ -1.1
TRAPPC4-204ENST00000524797 ALMS1Q8TCU4 4167 aa8.2□□□□□ -1.1
TRAPPC4-204ENST00000524797 IGKV1D-37A0A075B6S9 117 aa8.2□□□□□ -1.1
TRAPPC4-204ENST00000524797 FAM74A7A6NL05 159 aa8.2□□□□□ -1.1
TRAPPC4-204ENST00000524797 ARPC5O15511 151 aa8.2□□□□□ -1.1
TRAPPC4-204ENST00000524797 RD3LP0DJH9 198 aa8.2□□□□□ -1.1
TRAPPC4-204ENST00000524797 EWSR1Q01844 656 aaKnown RBP eCLIP8.2□□□□□ -1.1
TRAPPC4-204ENST00000524797 GAMTQ14353 236 aa8.2□□□□□ -1.1
TRAPPC4-204ENST00000524797 FAM74A3Q4VXF1 159 aa8.2□□□□□ -1.1
TRAPPC4-204ENST00000524797 FLVCR2Q9UPI3 526 aa8.2□□□□□ -1.1
TRAPPC4-204ENST00000524797 SACSQ9NZJ4 4579 aa8.2□□□□□ -1.1
TRAPPC4-204ENST00000524797 C9orf170A2RU37 121 aa8.19□□□□□ -1.1
TRAPPC4-204ENST00000524797 HELTA6NFD8 242 aa8.19□□□□□ -1.1
TRAPPC4-204ENST00000524797 PSG1P11464 419 aa8.19□□□□□ -1.1
TRAPPC4-204ENST00000524797 RAB11AP62491 216 aa8.19□□□□□ -1.1
TRAPPC4-204ENST00000524797 OR51G1Q8NGK1 321 aa8.19□□□□□ -1.1
TRAPPC4-204ENST00000524797 DCANP1Q8TF63 244 aa8.19□□□□□ -1.1
TRAPPC4-204ENST00000524797 GATAD1Q8WUU5 269 aa8.19□□□□□ -1.1
TRAPPC4-204ENST00000524797 LYSTQ99698 3801 aa8.19□□□□□ -1.1
TRAPPC4-204ENST00000524797 MAGT1Q9H0U3 335 aa8.19□□□□□ -1.1
TRAPPC4-204ENST00000524797 SYNGR2O43760 224 aa8.19□□□□□ -1.1
TRAPPC4-204ENST00000524797 ZNF688P0C7X2 276 aa8.19□□□□□ -1.1
TRAPPC4-204ENST00000524797 DHRS2Q13268 280 aa8.19□□□□□ -1.1
TRAPPC4-204ENST00000524797 LCE2DQ5TA82 110 aaPredicted RBP8.19□□□□□ -1.1
TRAPPC4-204ENST00000524797 ASB13Q8WXK3 278 aa8.19□□□□□ -1.1
TRAPPC4-204ENST00000524797 FXYD6-FXYD2A0A087WZ82 144 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms