RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 IDNKQ5T6J7 187 aa11.79□□□□□ -0.52
PVT1-220ENST00000524165 ETFRF1Q6IPR1 90 aa11.79□□□□□ -0.52
PVT1-220ENST00000524165 VSIG2Q96IQ7 327 aa11.79□□□□□ -0.52
PVT1-220ENST00000524165 PBDC1Q9BVG4 233 aa11.79□□□□□ -0.52
PVT1-220ENST00000524165 IFT46Q9NQC8 304 aa11.79□□□□□ -0.52
PVT1-220ENST00000524165 MEIS3P1A6NDR6 274 aa11.78□□□□□ -0.52
PVT1-220ENST00000524165 BOLA2-SMG1P6H3BVE0 249 aa11.78□□□□□ -0.52
PVT1-220ENST00000524165 PMP2P02689 132 aa11.78□□□□□ -0.52
PVT1-220ENST00000524165 UCP1P25874 307 aa11.78□□□□□ -0.52
PVT1-220ENST00000524165 KRTAP10-4P60372 401 aaPredicted RBP11.78□□□□□ -0.52
PVT1-220ENST00000524165 C2orf83Q53S99 150 aa11.78□□□□□ -0.52
PVT1-220ENST00000524165 C22orf42Q6IC83 251 aa11.78□□□□□ -0.52
PVT1-220ENST00000524165 Q6ZSA8 131 aa11.78□□□□□ -0.52
PVT1-220ENST00000524165 TMED4Q7Z7H5 227 aa11.78□□□□□ -0.52
PVT1-220ENST00000524165 DUSP21Q9H596 190 aa11.78□□□□□ -0.52
PVT1-220ENST00000524165 NDUFB11Q9NX14 153 aa11.78□□□□□ -0.52
PVT1-220ENST00000524165 ZNF98A6NK75 572 aa11.77□□□□□ -0.53
PVT1-220ENST00000524165 RGS10O43665 173 aa11.77□□□□□ -0.53
PVT1-220ENST00000524165 SCAND1P57086 179 aa11.77□□□□□ -0.53
PVT1-220ENST00000524165 TAS2R46P59540 309 aa11.77□□□□□ -0.53
PVT1-220ENST00000524165 OR8I2Q8N0Y5 310 aa11.77□□□□□ -0.53
PVT1-220ENST00000524165 OR5H2Q8NGV7 314 aa11.77□□□□□ -0.53
PVT1-220ENST00000524165 SLC25A38Q96DW6 304 aa11.77□□□□□ -0.53
PVT1-220ENST00000524165 DIABLOQ9NR28 239 aa11.77□□□□□ -0.53
PVT1-220ENST00000524165 TPRKBQ9Y3C4 175 aa11.77□□□□□ -0.53
PVT1-220ENST00000524165 GAGE12BA1L429 117 aa11.76□□□□□ -0.53
PVT1-220ENST00000524165 GAGE7O76087 117 aa11.76□□□□□ -0.53
PVT1-220ENST00000524165 RLN2P04090 185 aa11.76□□□□□ -0.53
PVT1-220ENST00000524165 GAGE12FP0CL80 117 aa11.76□□□□□ -0.53
PVT1-220ENST00000524165 GAGE12GP0CL81 117 aa11.76□□□□□ -0.53
PVT1-220ENST00000524165 GAGE12IP0CL82 117 aa11.76□□□□□ -0.53
PVT1-220ENST00000524165 AKR1C2P52895 323 aa11.76□□□□□ -0.53
PVT1-220ENST00000524165 ACY3Q96HD9 319 aa11.76□□□□□ -0.53
PVT1-220ENST00000524165 ANAPC10Q9UM13 185 aa11.76□□□□□ -0.53
PVT1-220ENST00000524165 LY96Q9Y6Y9 160 aa11.76□□□□□ -0.53
PVT1-220ENST00000524165 LRCOL1A6NCL2 159 aa11.75□□□□□ -0.53
PVT1-220ENST00000524165 ATG12O94817 140 aa11.75□□□□□ -0.53
PVT1-220ENST00000524165 ZNF182P17025 639 aaPredicted RBP11.75□□□□□ -0.53
PVT1-220ENST00000524165 RRNAD1Q96FB5 475 aaKnown RBP11.75□□□□□ -0.53
PVT1-220ENST00000524165 SLC25A39Q9BZJ4 359 aaPredicted RBP11.75□□□□□ -0.53
PVT1-220ENST00000524165 NAT1P18440 290 aa11.74□□□□□ -0.53
PVT1-220ENST00000524165 SPCS3P61009 180 aa11.74□□□□□ -0.53
PVT1-220ENST00000524165 GAMTQ14353 236 aa11.74□□□□□ -0.53
PVT1-220ENST00000524165 LINC00467Q9BRT7 94 aa11.74□□□□□ -0.53
PVT1-220ENST00000524165 TMPRSS5Q9H3S3 457 aa11.74□□□□□ -0.53
PVT1-220ENST00000524165 AARDQ4LEZ3 155 aa11.73□□□□□ -0.53
PVT1-220ENST00000524165 PRSS48Q7RTY5 328 aa11.73□□□□□ -0.53
PVT1-220ENST00000524165 Q8N814 137 aa11.73□□□□□ -0.53
PVT1-220ENST00000524165 OR5H6Q8NGV6 325 aa11.73□□□□□ -0.53
PVT1-220ENST00000524165 HEYLQ9NQ87 328 aaPredicted RBP11.73□□□□□ -0.53
PVT1-220ENST00000524165 PKHD1L1Q86WI1 4243 aa11.72□□□□□ -0.53
PVT1-220ENST00000524165 H7BYZ3 331 aa11.72□□□□□ -0.53
PVT1-220ENST00000524165 GALR1P47211 349 aa11.72□□□□□ -0.53
PVT1-220ENST00000524165 UCP3P55916 312 aa11.72□□□□□ -0.53
PVT1-220ENST00000524165 OR52E5Q8NH55 327 aa11.72□□□□□ -0.53
PVT1-220ENST00000524165 TMEM170AQ8WVE7 144 aa11.72□□□□□ -0.53
PVT1-220ENST00000524165 PPP1R14BQ96C90 147 aa11.72□□□□□ -0.53
PVT1-220ENST00000524165 CCDC28AQ8IWP9 274 aa11.71□□□□□ -0.53
PVT1-220ENST00000524165 RSG1Q9BU20 258 aa11.71□□□□□ -0.53
PVT1-220ENST00000524165 ICOSQ9Y6W8 199 aa11.71□□□□□ -0.53
PVT1-220ENST00000524165 SNURFLB1AK76 121 aa11.7□□□□□ -0.54
PVT1-220ENST00000524165 PSCAO43653 123 aa11.7□□□□□ -0.54
PVT1-220ENST00000524165 EVI2AP22794 236 aa11.7□□□□□ -0.54
PVT1-220ENST00000524165 HRH1P35367 487 aa11.7□□□□□ -0.54
PVT1-220ENST00000524165 LYZP61626 148 aa11.7□□□□□ -0.54
PVT1-220ENST00000524165 KLF9Q13886 244 aaPredicted RBP11.7□□□□□ -0.54
PVT1-220ENST00000524165 LYPD5Q6UWN5 251 aa11.7□□□□□ -0.54
PVT1-220ENST00000524165 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.7□□□□□ -0.54
PVT1-220ENST00000524165 NOXA1Q86UR1 476 aa11.7□□□□□ -0.54
PVT1-220ENST00000524165 C20orf144Q9BQM9 153 aa11.7□□□□□ -0.54
PVT1-220ENST00000524165 PPP1R14DQ9NXH3 145 aa11.7□□□□□ -0.54
PVT1-220ENST00000524165 A0A0G2JRQ6 117 aa11.69□□□□□ -0.54
PVT1-220ENST00000524165 SNRPGP15A8MWD9 76 aa11.69□□□□□ -0.54
PVT1-220ENST00000524165 CDKN1BP46527 198 aa11.69□□□□□ -0.54
PVT1-220ENST00000524165 RND3P61587 244 aa11.69□□□□□ -0.54
PVT1-220ENST00000524165 TSPAN5P62079 268 aa11.69□□□□□ -0.54
PVT1-220ENST00000524165 RHOBP62745 196 aa11.69□□□□□ -0.54
PVT1-220ENST00000524165 ZNF90Q03938 601 aa11.69□□□□□ -0.54
PVT1-220ENST00000524165 LYSMD2Q8IV50 215 aa11.69□□□□□ -0.54
PVT1-220ENST00000524165 SPARTQ8N0X7 666 aa11.69□□□□□ -0.54
PVT1-220ENST00000524165 TP53RKQ96S44 253 aa11.69□□□□□ -0.54
PVT1-220ENST00000524165 SLC25A32Q9H2D1 315 aa11.69□□□□□ -0.54
PVT1-220ENST00000524165 TXNL4BQ9NX01 149 aaKnown RBP11.69□□□□□ -0.54
PVT1-220ENST00000524165 TRAV8-2A0A0B4J237 113 aa11.68□□□□□ -0.54
PVT1-220ENST00000524165 ZFP92A6NM28 416 aa11.68□□□□□ -0.54
PVT1-220ENST00000524165 FABP1P07148 127 aa11.68□□□□□ -0.54
PVT1-220ENST00000524165 RNF182Q8N6D2 247 aa11.68□□□□□ -0.54
PVT1-220ENST00000524165 IGKV1D-37A0A075B6S9 117 aa11.67□□□□□ -0.54
PVT1-220ENST00000524165 HIST1H1AQ02539 215 aaPredicted RBP11.67□□□□□ -0.54
PVT1-220ENST00000524165 DAZ2Q13117 558 aaKnown RBP11.67□□□□□ -0.54
PVT1-220ENST00000524165 IGFL4Q6B9Z1 124 aa11.67□□□□□ -0.54
PVT1-220ENST00000524165 Q6ZTI0 123 aa11.67□□□□□ -0.54
PVT1-220ENST00000524165 C10orf126Q8N4M7 172 aa11.67□□□□□ -0.54
PVT1-220ENST00000524165 ZNF738Q8NE65 137 aa11.67□□□□□ -0.54
PVT1-220ENST00000524165 OR8A1Q8NGG7 326 aa11.67□□□□□ -0.54
PVT1-220ENST00000524165 OR4D5Q8NGN0 318 aa11.67□□□□□ -0.54
PVT1-220ENST00000524165 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.67□□□□□ -0.54
PVT1-220ENST00000524165 RS1O15537 224 aa11.66□□□□□ -0.54
PVT1-220ENST00000524165 ZNF324O75467 553 aaPredicted RBP11.66□□□□□ -0.54
PVT1-220ENST00000524165 OR5AC1P0C628 307 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms