RNA–Protein interactions for RNA: ENST00000523655.1

SREK1-213, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, human

TSL 5

Gene SREK1, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREK1-213	ENST00000523655	OR2D2	Q9H210	308 aa		2.81	□□□□□ -1.96
SREK1-213	ENST00000523655	INIP	Q9NRY2	104 aa		2.81	□□□□□ -1.96
SREK1-213	ENST00000523655	VPREB3	Q9UKI3	123 aa		2.81	□□□□□ -1.96
SREK1-213	ENST00000523655	PRELID3B	Q9Y3B1	194 aa		2.81	□□□□□ -1.96
SREK1-213	ENST00000523655	DOCK11	Q5JSL3	2073 aa		2.81	□□□□□ -1.96
SREK1-213	ENST00000523655	ARHGAP32	A7KAX9	2087 aa		2.8	□□□□□ -1.96
SREK1-213	ENST00000523655	NACA	E9PAV3	2078 aa		2.8	□□□□□ -1.96
SREK1-213	ENST00000523655	DNAH17	Q9UFH2	4485 aa		2.8	□□□□□ -1.96
SREK1-213	ENST00000523655	TMED7-TICAM2	A0A0A6YYA0	188 aa		2.8	□□□□□ -1.96
SREK1-213	ENST00000523655		A0A1B0GV50	99 aa		2.8	□□□□□ -1.96
SREK1-213	ENST00000523655	ZNF850	A8MQ14	1090 aa		2.8	□□□□□ -1.96
SREK1-213	ENST00000523655	LEUTX	A8MZ59	168 aa		2.8	□□□□□ -1.96
SREK1-213	ENST00000523655	BHLHE40	O14503	412 aa		2.8	□□□□□ -1.96
SREK1-213	ENST00000523655	BET1	O15155	118 aa		2.8	□□□□□ -1.96
SREK1-213	ENST00000523655	GPR75	O95800	540 aa		2.8	□□□□□ -1.96
SREK1-213	ENST00000523655	IGHG2	P01859	326 aa		2.8	□□□□□ -1.96
SREK1-213	ENST00000523655	OPN1SW	P03999	348 aa		2.8	□□□□□ -1.96
SREK1-213	ENST00000523655	CD5	P06127	495 aa		2.8	□□□□□ -1.96
SREK1-213	ENST00000523655	INAFM2	P0DMQ5	153 aa		2.8	□□□□□ -1.96
SREK1-213	ENST00000523655	OR10J1	P30954	320 aa		2.8	□□□□□ -1.96
SREK1-213	ENST00000523655	TGFBR2	P37173	567 aa		2.8	□□□□□ -1.96
SREK1-213	ENST00000523655	DAP	P51397	102 aa		2.8	□□□□□ -1.96
SREK1-213	ENST00000523655	PSME3	P61289	254 aa		2.8	□□□□□ -1.96
SREK1-213	ENST00000523655	PSG4	Q00888	419 aa		2.8	□□□□□ -1.96
SREK1-213	ENST00000523655	ZNF616	Q08AN1	781 aa		2.8	□□□□□ -1.96
SREK1-213	ENST00000523655	KRR1	Q13601	381 aa	Known RBP	2.8	□□□□□ -1.96
SREK1-213	ENST00000523655	LIN52	Q52LA3	116 aa		2.8	□□□□□ -1.96
SREK1-213	ENST00000523655	LRP11	Q86VZ4	500 aa		2.8	□□□□□ -1.96
SREK1-213	ENST00000523655	TMEM35B	Q8NCS4	154 aa		2.8	□□□□□ -1.96
SREK1-213	ENST00000523655	MS4A6E	Q96DS6	147 aa		2.8	□□□□□ -1.96
SREK1-213	ENST00000523655	SLC25A44	Q96H78	314 aa	Predicted RBP	2.8	□□□□□ -1.96
SREK1-213	ENST00000523655	PHB2	Q99623	299 aa		2.8	□□□□□ -1.96
SREK1-213	ENST00000523655	SIGMAR1	Q99720	223 aa		2.8	□□□□□ -1.96
SREK1-213	ENST00000523655	C1QTNF6	Q9BXI9	259 aa		2.8	□□□□□ -1.96
SREK1-213	ENST00000523655	OR8D2	Q9GZM6	311 aa		2.8	□□□□□ -1.96
SREK1-213	ENST00000523655	PAQR5	Q9NXK6	330 aa	Predicted RBP	2.8	□□□□□ -1.96
SREK1-213	ENST00000523655	DOK5	Q9P104	306 aa		2.8	□□□□□ -1.96
SREK1-213	ENST00000523655		V9GYQ6	96 aa		2.8	□□□□□ -1.96
SREK1-213	ENST00000523655		A8MWP4	228 aa		2.79	□□□□□ -1.96
SREK1-213	ENST00000523655	INMT-MINDY4	F8WBC2	141 aa		2.79	□□□□□ -1.96
SREK1-213	ENST00000523655	TP53I11	O14683	189 aa		2.79	□□□□□ -1.96
SREK1-213	ENST00000523655	MED6	O75586	246 aa		2.79	□□□□□ -1.96
SREK1-213	ENST00000523655	LYZL6	O75951	148 aa		2.79	□□□□□ -1.96
SREK1-213	ENST00000523655	APOM	O95445	188 aa		2.79	□□□□□ -1.96
SREK1-213	ENST00000523655	TTR	P02766	147 aa		2.79	□□□□□ -1.96
SREK1-213	ENST00000523655	GYPC	P04921	128 aa		2.79	□□□□□ -1.96
SREK1-213	ENST00000523655	HLA-DQB2	P05538	268 aa		2.79	□□□□□ -1.96
SREK1-213	ENST00000523655	FAM228B	P0C875	321 aa		2.79	□□□□□ -1.96
SREK1-213	ENST00000523655	ESD	P10768	282 aa		2.79	□□□□□ -1.96
SREK1-213	ENST00000523655	MUC1	P15941	1255 aa	Predicted RBP	2.79	□□□□□ -1.96
SREK1-213	ENST00000523655	GABRA3	P34903	492 aa		2.79	□□□□□ -1.96
SREK1-213	ENST00000523655	TMEM33	P57088	247 aa		2.79	□□□□□ -1.96
SREK1-213	ENST00000523655	RAB14	P61106	215 aa		2.79	□□□□□ -1.96
SREK1-213	ENST00000523655	FGF12	P61328	243 aa		2.79	□□□□□ -1.96
SREK1-213	ENST00000523655	CDK10	Q15131	360 aa		2.79	□□□□□ -1.96
SREK1-213	ENST00000523655	PLPPR5	Q32ZL2	321 aa		2.79	□□□□□ -1.96
SREK1-213	ENST00000523655	C5orf46	Q6UWT4	87 aa		2.79	□□□□□ -1.96
SREK1-213	ENST00000523655	SLC36A1	Q7Z2H8	476 aa		2.79	□□□□□ -1.96
SREK1-213	ENST00000523655	TMED4	Q7Z7H5	227 aa		2.79	□□□□□ -1.96
SREK1-213	ENST00000523655	DAZ4	Q86SG3	579 aa	Known RBP	2.79	□□□□□ -1.96
SREK1-213	ENST00000523655	C1orf174	Q8IYL3	243 aa		2.79	□□□□□ -1.96
SREK1-213	ENST00000523655	ST20-AS1	Q8NBB2	130 aa		2.79	□□□□□ -1.96
SREK1-213	ENST00000523655	DEFB108B	Q8NET1	73 aa		2.79	□□□□□ -1.96
SREK1-213	ENST00000523655	OR2T4	Q8NH00	348 aa		2.79	□□□□□ -1.96
SREK1-213	ENST00000523655	LHFPL5	Q8TAF8	219 aa		2.79	□□□□□ -1.96
SREK1-213	ENST00000523655	NEK7	Q8TDX7	302 aa		2.79	□□□□□ -1.96
SREK1-213	ENST00000523655	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	2.79	□□□□□ -1.96
SREK1-213	ENST00000523655	SFRP2	Q96HF1	295 aa		2.79	□□□□□ -1.96
SREK1-213	ENST00000523655	BTF3L4	Q96K17	158 aa		2.79	□□□□□ -1.96
SREK1-213	ENST00000523655	PPP1R2P1	Q96PQ5	205 aa		2.79	□□□□□ -1.96
SREK1-213	ENST00000523655	NIPSNAP1	Q9BPW8	284 aa		2.79	□□□□□ -1.96
SREK1-213	ENST00000523655	VCX	Q9H320	206 aa		2.79	□□□□□ -1.96
SREK1-213	ENST00000523655	FAM96A	Q9H5X1	160 aa		2.79	□□□□□ -1.96
SREK1-213	ENST00000523655	DAZ1	Q9NQZ3	744 aa	Known RBP	2.79	□□□□□ -1.96
SREK1-213	ENST00000523655	GID8	Q9NWU2	228 aa		2.79	□□□□□ -1.96
SREK1-213	ENST00000523655	IDI2-AS1	Q9NZ38	188 aa		2.79	□□□□□ -1.96
SREK1-213	ENST00000523655	MRPL27	Q9P0M9	148 aa	Known RBP	2.79	□□□□□ -1.96
SREK1-213	ENST00000523655	ANAPC10	Q9UM13	185 aa		2.79	□□□□□ -1.96
SREK1-213	ENST00000523655	PXMP4	Q9Y6I8	212 aa		2.79	□□□□□ -1.96
SREK1-213	ENST00000523655	HEATR1	Q9H583	2144 aa	Known RBP	2.78	□□□□□ -1.96
SREK1-213	ENST00000523655	FAT4	Q6V0I7	4981 aa		2.78	□□□□□ -1.96
SREK1-213	ENST00000523655	OR6C6	A6NF89	314 aa		2.78	□□□□□ -1.96
SREK1-213	ENST00000523655	SIGLEC16	A6NMB1	481 aa		2.78	□□□□□ -1.96
SREK1-213	ENST00000523655	OR4C45	A6NMZ5	311 aa		2.78	□□□□□ -1.96
SREK1-213	ENST00000523655	ATP6V1G2-DDX39B	F2Z307	99 aa		2.78	□□□□□ -1.96
SREK1-213	ENST00000523655	OR7C1	O76099	320 aa	Predicted RBP	2.78	□□□□□ -1.96
SREK1-213	ENST00000523655	IGKV1D-33	P01593	117 aa		2.78	□□□□□ -1.96
SREK1-213	ENST00000523655	IGKV1-33	P01594	117 aa		2.78	□□□□□ -1.96
SREK1-213	ENST00000523655	IGHM	P01871	453 aa		2.78	□□□□□ -1.96
SREK1-213	ENST00000523655	TRGV3	P03979	118 aa		2.78	□□□□□ -1.96
SREK1-213	ENST00000523655	FGF6	P10767	208 aa		2.78	□□□□□ -1.96
SREK1-213	ENST00000523655	HIST1H1T	P22492	207 aa	Predicted RBP	2.78	□□□□□ -1.96
SREK1-213	ENST00000523655	RPL19	P84098	196 aa	Known RBP	2.78	□□□□□ -1.96
SREK1-213	ENST00000523655	RUNX1	Q01196	453 aa		2.78	□□□□□ -1.96
SREK1-213	ENST00000523655	RELA	Q04206	551 aa		2.78	□□□□□ -1.96
SREK1-213	ENST00000523655	FUT5	Q11128	374 aa		2.78	□□□□□ -1.96
SREK1-213	ENST00000523655	CCSMST1	Q4G0I0	132 aa		2.78	□□□□□ -1.96
SREK1-213	ENST00000523655	DEFB134	Q4QY38	66 aa		2.78	□□□□□ -1.96
SREK1-213	ENST00000523655	LINC00483	Q53H64	154 aa		2.78	□□□□□ -1.96
SREK1-213	ENST00000523655	LPCAT3	Q6P1A2	487 aa		2.78	□□□□□ -1.96

Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms