RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 NEU1Q99519 415 aa10.98□□□□□ -0.65
MRPS28-209ENST00000522987 SHPKQ9UHJ6 478 aa10.98□□□□□ -0.65
MRPS28-209ENST00000522987 SCP2D1Q9UJQ7 156 aa10.98□□□□□ -0.65
MRPS28-209ENST00000522987 YTHDF2Q9Y5A9 579 aaKnown RBP10.98□□□□□ -0.65
MRPS28-209ENST00000522987 PKHD1P08F94 4074 aa10.97□□□□□ -0.65
MRPS28-209ENST00000522987 CTDSPLO15194 276 aa10.97□□□□□ -0.65
MRPS28-209ENST00000522987 GATA2P23769 480 aaPredicted RBP10.97□□□□□ -0.65
MRPS28-209ENST00000522987 NUP62P37198 522 aaPredicted RBP10.97□□□□□ -0.65
MRPS28-209ENST00000522987 PSG9Q00887 426 aa10.97□□□□□ -0.65
MRPS28-209ENST00000522987 ZNF79Q15937 498 aa10.97□□□□□ -0.65
MRPS28-209ENST00000522987 IGFL4Q6B9Z1 124 aa10.97□□□□□ -0.65
MRPS28-209ENST00000522987 EBLN2Q6P2I7 272 aa10.97□□□□□ -0.65
MRPS28-209ENST00000522987 C16orf92Q96LL3 132 aa10.97□□□□□ -0.65
MRPS28-209ENST00000522987 MRPS26Q9BYN8 205 aaKnown RBP10.97□□□□□ -0.65
MRPS28-209ENST00000522987 MAGT1Q9H0U3 335 aa10.97□□□□□ -0.65
MRPS28-209ENST00000522987 SLC25A32Q9H2D1 315 aa10.97□□□□□ -0.65
MRPS28-209ENST00000522987 PFDN2Q9UHV9 154 aa10.97□□□□□ -0.65
MRPS28-209ENST00000522987 GOLT1BQ9Y3E0 138 aa10.97□□□□□ -0.65
MRPS28-209ENST00000522987 IGKV1OR2-108A0A075B7D4 117 aa10.96□□□□□ -0.65
MRPS28-209ENST00000522987 A0A0J9YX75 114 aa10.96□□□□□ -0.65
MRPS28-209ENST00000522987 TMEM189A5PLL7 270 aa10.96□□□□□ -0.65
MRPS28-209ENST00000522987 SMIM9A6NGZ8 99 aa10.96□□□□□ -0.65
MRPS28-209ENST00000522987 SNRPGP15A8MWD9 76 aa10.96□□□□□ -0.65
MRPS28-209ENST00000522987 HBE1P02100 147 aa10.96□□□□□ -0.65
MRPS28-209ENST00000522987 GPX4P36969 197 aaPredicted RBP10.96□□□□□ -0.65
MRPS28-209ENST00000522987 ALDH3B2P48448 385 aa10.96□□□□□ -0.65
MRPS28-209ENST00000522987 DYNC2LI1Q8TCX1 351 aa10.96□□□□□ -0.65
MRPS28-209ENST00000522987 VAMP1P23763 118 aa10.95□□□□□ -0.66
MRPS28-209ENST00000522987 TMEM88Q6PEY1 159 aa10.95□□□□□ -0.66
MRPS28-209ENST00000522987 ZNF575Q86XF7 245 aa10.95□□□□□ -0.66
MRPS28-209ENST00000522987 SCGB3A2Q96PL1 93 aa10.95□□□□□ -0.66
MRPS28-209ENST00000522987 TMEM208Q9BTX3 173 aa10.95□□□□□ -0.66
MRPS28-209ENST00000522987 RSG1Q9BU20 258 aa10.95□□□□□ -0.66
MRPS28-209ENST00000522987 ZNF705GA8MUZ8 300 aaPredicted RBP10.94□□□□□ -0.66
MRPS28-209ENST00000522987 H3BP45 60 aa10.94□□□□□ -0.66
MRPS28-209ENST00000522987 WRBO00258 174 aa10.94□□□□□ -0.66
MRPS28-209ENST00000522987 ISLRO14498 428 aa10.94□□□□□ -0.66
MRPS28-209ENST00000522987 FABP1P07148 127 aa10.94□□□□□ -0.66
MRPS28-209ENST00000522987 ANXA3P12429 323 aa10.94□□□□□ -0.66
MRPS28-209ENST00000522987 ORM2P19652 201 aa10.94□□□□□ -0.66
MRPS28-209ENST00000522987 DAD1P61803 113 aa10.94□□□□□ -0.66
MRPS28-209ENST00000522987 RAB11AP62491 216 aa10.94□□□□□ -0.66
MRPS28-209ENST00000522987 FGL1Q08830 312 aa10.94□□□□□ -0.66
MRPS28-209ENST00000522987 RRN3P1Q2M238 152 aa10.94□□□□□ -0.66
MRPS28-209ENST00000522987 LGALS9BQ3B8N2 356 aa10.94□□□□□ -0.66
MRPS28-209ENST00000522987 TMEM182Q6ZP80 229 aaPredicted RBP10.94□□□□□ -0.66
MRPS28-209ENST00000522987 TRGV9Q99603 122 aa10.94□□□□□ -0.66
MRPS28-209ENST00000522987 RPRMQ9NS64 109 aa10.94□□□□□ -0.66
MRPS28-209ENST00000522987 CCDC59Q9P031 241 aaKnown RBP10.94□□□□□ -0.66
MRPS28-209ENST00000522987 DOK5Q9P104 306 aa10.94□□□□□ -0.66
MRPS28-209ENST00000522987 CACFD1Q9UGQ2 172 aa10.94□□□□□ -0.66
MRPS28-209ENST00000522987 PKD1P98161 4303 aa10.93□□□□□ -0.66
MRPS28-209ENST00000522987 DYNC1H1Q14204 4646 aaKnown RBP10.93□□□□□ -0.66
MRPS28-209ENST00000522987 FABP12A6NFH5 140 aa10.93□□□□□ -0.66
MRPS28-209ENST00000522987 M0R2Z0 102 aa10.93□□□□□ -0.66
MRPS28-209ENST00000522987 MED14OSP0DP75 135 aa10.93□□□□□ -0.66
MRPS28-209ENST00000522987 TNFSF8P32971 234 aa10.93□□□□□ -0.66
MRPS28-209ENST00000522987 PAX9P55771 341 aa10.93□□□□□ -0.66
MRPS28-209ENST00000522987 SPINK13Q1W4C9 94 aa10.93□□□□□ -0.66
MRPS28-209ENST00000522987 C1orf194Q5T5A4 169 aa10.93□□□□□ -0.66
MRPS28-209ENST00000522987 RNF182Q8N6D2 247 aa10.93□□□□□ -0.66
MRPS28-209ENST00000522987 C17orf77Q96MU5 243 aa10.93□□□□□ -0.66
MRPS28-209ENST00000522987 RSL24D1Q9UHA3 163 aaKnown RBP10.93□□□□□ -0.66
MRPS28-209ENST00000522987 ZNF98A6NK75 572 aa10.92□□□□□ -0.66
MRPS28-209ENST00000522987 PITX3O75364 302 aa10.92□□□□□ -0.66
MRPS28-209ENST00000522987 HOXB5P09067 269 aa10.92□□□□□ -0.66
MRPS28-209ENST00000522987 GALR1P47211 349 aa10.92□□□□□ -0.66
MRPS28-209ENST00000522987 SRPXP78539 464 aa10.92□□□□□ -0.66
MRPS28-209ENST00000522987 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.92□□□□□ -0.66
MRPS28-209ENST00000522987 Q6ZR54 194 aa10.92□□□□□ -0.66
MRPS28-209ENST00000522987 THAP8Q8NA92 274 aa10.92□□□□□ -0.66
MRPS28-209ENST00000522987 OR1B1Q8NGR6 318 aa10.92□□□□□ -0.66
MRPS28-209ENST00000522987 AKR1C1Q04828 323 aa10.91□□□□□ -0.66
MRPS28-209ENST00000522987 FCN2Q15485 313 aa10.91□□□□□ -0.66
MRPS28-209ENST00000522987 SPANXN5Q5MJ07 72 aa10.91□□□□□ -0.66
MRPS28-209ENST00000522987 AMTNQ6UX39 209 aa10.91□□□□□ -0.66
MRPS28-209ENST00000522987 BAP18Q8IXM2 172 aa10.91□□□□□ -0.66
MRPS28-209ENST00000522987 RAB2BQ8WUD1 216 aa10.91□□□□□ -0.66
MRPS28-209ENST00000522987 CLUHP3Q96NS8 147 aa10.91□□□□□ -0.66
MRPS28-209ENST00000522987 SLC25A39Q9BZJ4 359 aaPredicted RBP10.91□□□□□ -0.66
MRPS28-209ENST00000522987 SLIRPQ9GZT3 109 aaKnown RBP10.91□□□□□ -0.66
MRPS28-209ENST00000522987 TRAV12-2A0A075B6T6 113 aa10.9□□□□□ -0.66
MRPS28-209ENST00000522987 TEX48A0A1B0GUV7 120 aa10.9□□□□□ -0.66
MRPS28-209ENST00000522987 SMCO3A2RU48 225 aa10.9□□□□□ -0.66
MRPS28-209ENST00000522987 DEFB130BP0DP73 79 aa10.9□□□□□ -0.66
MRPS28-209ENST00000522987 DEFB130AP0DP74 79 aa10.9□□□□□ -0.66
MRPS28-209ENST00000522987 CNN1P51911 297 aaKnown RBP10.9□□□□□ -0.66
MRPS28-209ENST00000522987 ATP5IP56385 69 aaPredicted RBP10.9□□□□□ -0.66
MRPS28-209ENST00000522987 PPP1R1AQ13522 171 aa10.9□□□□□ -0.66
MRPS28-209ENST00000522987 PYDC2Q56P42 97 aa10.9□□□□□ -0.66
MRPS28-209ENST00000522987 SPATA31B1PQ5VZV4 182 aa10.9□□□□□ -0.66
MRPS28-209ENST00000522987 OR11H7Q8NGC8 314 aa10.9□□□□□ -0.66
MRPS28-209ENST00000522987 MCFD2Q8NI22 146 aa10.9□□□□□ -0.66
MRPS28-209ENST00000522987 FAM210BQ96KR6 192 aa10.9□□□□□ -0.66
MRPS28-209ENST00000522987 IGF2BP2-AS1Q96M15 143 aa10.9□□□□□ -0.66
MRPS28-209ENST00000522987 RABL2AQ9UBK7 228 aaPredicted RBP10.9□□□□□ -0.66
MRPS28-209ENST00000522987 RABL2BQ9UNT1 228 aa10.9□□□□□ -0.66
MRPS28-209ENST00000522987 RYR1P21817 5038 aa10.9□□□□□ -0.67
MRPS28-209ENST00000522987 TRAV8-2A0A0B4J237 113 aa10.89□□□□□ -0.67
MRPS28-209ENST00000522987 PRSS46E5RG02 174 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms