RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 IGHV4OR15-8A0A075B7B6 117 aa16.43■□□□□ 0.22
R3HCC1-208ENST00000522012 A0A087WW49 117 aa16.43■□□□□ 0.22
R3HCC1-208ENST00000522012 SEC14L6B5MCN3 397 aa16.43■□□□□ 0.22
R3HCC1-208ENST00000522012 LINC00305Q7Z4B0 112 aa16.43■□□□□ 0.22
R3HCC1-208ENST00000522012 RNF2Q99496 336 aa16.43■□□□□ 0.22
R3HCC1-208ENST00000522012 MDFIQ99750 246 aa16.43■□□□□ 0.22
R3HCC1-208ENST00000522012 C20orf24Q9BUV8 137 aa16.43■□□□□ 0.22
R3HCC1-208ENST00000522012 ZFAND3Q9H8U3 227 aa16.43■□□□□ 0.22
R3HCC1-208ENST00000522012 MRPL27Q9P0M9 148 aaKnown RBP16.43■□□□□ 0.22
R3HCC1-208ENST00000522012 FUT9Q9Y231 359 aa16.43■□□□□ 0.22
R3HCC1-208ENST00000522012 CTXND1A0A1B0GTU2 59 aa16.42■□□□□ 0.22
R3HCC1-208ENST00000522012 A0A1B0GV50 99 aa16.42■□□□□ 0.22
R3HCC1-208ENST00000522012 NDUFA4O00483 81 aa16.42■□□□□ 0.22
R3HCC1-208ENST00000522012 KRTAP10-3P60369 221 aa16.42■□□□□ 0.22
R3HCC1-208ENST00000522012 RPEL1Q2QD12 228 aa16.42■□□□□ 0.22
R3HCC1-208ENST00000522012 DEFB136Q30KP8 78 aa16.42■□□□□ 0.22
R3HCC1-208ENST00000522012 MIR17HGQ75NE6 70 aa16.42■□□□□ 0.22
R3HCC1-208ENST00000522012 HRH4Q9H3N8 390 aa16.42■□□□□ 0.22
R3HCC1-208ENST00000522012 ZNF320A2RRD8 509 aa16.41■□□□□ 0.22
R3HCC1-208ENST00000522012 MRPL32Q9BYC8 188 aaKnown RBP16.41■□□□□ 0.22
R3HCC1-208ENST00000522012 MAP1LC3B2A6NCE7 125 aa16.4■□□□□ 0.22
R3HCC1-208ENST00000522012 KRTAP24-1Q3LI83 254 aa16.4■□□□□ 0.22
R3HCC1-208ENST00000522012 FAM106AQ4KMX7 169 aa16.4■□□□□ 0.22
R3HCC1-208ENST00000522012 MORN5Q5VZ52 161 aa16.4■□□□□ 0.22
R3HCC1-208ENST00000522012 UNQ9165/PRO28630Q6UXU0 137 aa16.4■□□□□ 0.22
R3HCC1-208ENST00000522012 C8orf86Q6ZUL3 223 aa16.4■□□□□ 0.22
R3HCC1-208ENST00000522012 OR1N2Q8NGR9 330 aa16.4■□□□□ 0.22
R3HCC1-208ENST00000522012 MBD3L1Q8WWY6 194 aa16.4■□□□□ 0.22
R3HCC1-208ENST00000522012 DPF1Q92782 380 aa16.4■□□□□ 0.22
R3HCC1-208ENST00000522012 MAP1LC3BQ9GZQ8 125 aa16.4■□□□□ 0.22
R3HCC1-208ENST00000522012 RABAC1Q9UI14 185 aa16.4■□□□□ 0.22
R3HCC1-208ENST00000522012 TRAV5A0A0B4J249 113 aa16.4■□□□□ 0.22
R3HCC1-208ENST00000522012 ZNF207O43670 478 aaKnown RBP16.4■□□□□ 0.22
R3HCC1-208ENST00000522012 FGF8P55075 233 aaPredicted RBP16.4■□□□□ 0.22
R3HCC1-208ENST00000522012 AWAT1Q58HT5 328 aa16.4■□□□□ 0.22
R3HCC1-208ENST00000522012 OR11H1Q8NG94 326 aa16.4■□□□□ 0.22
R3HCC1-208ENST00000522012 SLC25A39Q9BZJ4 359 aaPredicted RBP16.4■□□□□ 0.22
R3HCC1-208ENST00000522012 TECRQ9NZ01 308 aaKnown RBP16.4■□□□□ 0.22
R3HCC1-208ENST00000522012 JMJD1CQ15652 2540 aa16.39■□□□□ 0.21
R3HCC1-208ENST00000522012 LINC01619G3V211 115 aa16.39■□□□□ 0.21
R3HCC1-208ENST00000522012 TEX46H3BTG2 121 aa16.39■□□□□ 0.21
R3HCC1-208ENST00000522012 S100A7AQ86SG5 101 aa16.39■□□□□ 0.21
R3HCC1-208ENST00000522012 GPHB5Q86YW7 130 aa16.39■□□□□ 0.21
R3HCC1-208ENST00000522012 DUX3Q96PT4 197 aa16.39■□□□□ 0.21
R3HCC1-208ENST00000522012 C8orf88P0DMB2 117 aa16.38■□□□□ 0.21
R3HCC1-208ENST00000522012 ZP3P21754 424 aa16.38■□□□□ 0.21
R3HCC1-208ENST00000522012 HOXD3P31249 432 aaPredicted RBP16.38■□□□□ 0.21
R3HCC1-208ENST00000522012 TAS2R45P59539 299 aa16.38■□□□□ 0.21
R3HCC1-208ENST00000522012 LEMD1Q68G75 181 aa16.38■□□□□ 0.21
R3HCC1-208ENST00000522012 METTL26Q96S19 204 aa16.38■□□□□ 0.21
R3HCC1-208ENST00000522012 SHANK2-AS3Q9BTD1 123 aa16.38■□□□□ 0.21
R3HCC1-208ENST00000522012 SCRT1Q9BWW7 348 aa16.38■□□□□ 0.21
R3HCC1-208ENST00000522012 HBE1P02100 147 aa16.37■□□□□ 0.21
R3HCC1-208ENST00000522012 NPPCP23582 126 aa16.37■□□□□ 0.21
R3HCC1-208ENST00000522012 NSUN5P1Q3KNT7 163 aa16.37■□□□□ 0.21
R3HCC1-208ENST00000522012 IQCF2Q8IXL9 164 aa16.37■□□□□ 0.21
R3HCC1-208ENST00000522012 SPATA3Q8NHX4 192 aa16.37■□□□□ 0.21
R3HCC1-208ENST00000522012 TMEM190Q8WZ59 177 aa16.37■□□□□ 0.21
R3HCC1-208ENST00000522012 TRAV1-1A0A0B4J248 108 aa16.36■□□□□ 0.21
R3HCC1-208ENST00000522012 H3BRN7 92 aa16.36■□□□□ 0.21
R3HCC1-208ENST00000522012 STAG3L2P0CL84 134 aa16.36■□□□□ 0.21
R3HCC1-208ENST00000522012 STAG3L3P0CL85 134 aa16.36■□□□□ 0.21
R3HCC1-208ENST00000522012 S100A7P31151 101 aa16.36■□□□□ 0.21
R3HCC1-208ENST00000522012 CCL20P78556 96 aa16.36■□□□□ 0.21
R3HCC1-208ENST00000522012 KHDC3LQ587J8 217 aa16.36■□□□□ 0.21
R3HCC1-208ENST00000522012 SLC25A2Q9BXI2 301 aa16.36■□□□□ 0.21
R3HCC1-208ENST00000522012 OR7C2O60412 319 aa16.35■□□□□ 0.21
R3HCC1-208ENST00000522012 CXorf1O96002 111 aa16.35■□□□□ 0.21
R3HCC1-208ENST00000522012 ARL14EPLP0DKL9 152 aa16.35■□□□□ 0.21
R3HCC1-208ENST00000522012 SLURP1P55000 103 aa16.35■□□□□ 0.21
R3HCC1-208ENST00000522012 SYNJ2BPP57105 145 aa16.35■□□□□ 0.21
R3HCC1-208ENST00000522012 NDUFA11Q86Y39 141 aa16.35■□□□□ 0.21
R3HCC1-208ENST00000522012 LYPD6BQ8NI32 183 aa16.35■□□□□ 0.21
R3HCC1-208ENST00000522012 RAX2Q96IS3 184 aa16.35■□□□□ 0.21
R3HCC1-208ENST00000522012 PFDN2Q9UHV9 154 aa16.35■□□□□ 0.21
R3HCC1-208ENST00000522012 IGHV3-49A0A0A0MS15 119 aa16.35■□□□□ 0.21
R3HCC1-208ENST00000522012 ZNF98A6NK75 572 aa16.35■□□□□ 0.21
R3HCC1-208ENST00000522012 TM4SF20Q53R12 229 aa16.35■□□□□ 0.21
R3HCC1-208ENST00000522012 FAM167A-AS1Q96KT0 104 aa16.35■□□□□ 0.21
R3HCC1-208ENST00000522012 TMPRSS5Q9H3S3 457 aa16.35■□□□□ 0.21
R3HCC1-208ENST00000522012 UFC1Q9Y3C8 167 aa16.35■□□□□ 0.21
R3HCC1-208ENST00000522012 IGHV3-66A0A0C4DH42 116 aa16.34■□□□□ 0.21
R3HCC1-208ENST00000522012 ADARB2-AS1A8MUL3 147 aa16.34■□□□□ 0.21
R3HCC1-208ENST00000522012 CCL24O00175 119 aa16.34■□□□□ 0.21
R3HCC1-208ENST00000522012 CRYBB3P26998 211 aa16.34■□□□□ 0.21
R3HCC1-208ENST00000522012 KLF5Q13887 457 aaPredicted RBP16.34■□□□□ 0.21
R3HCC1-208ENST00000522012 IL34Q6ZMJ4 242 aa16.34■□□□□ 0.21
R3HCC1-208ENST00000522012 C1QL4Q86Z23 238 aa16.34■□□□□ 0.21
R3HCC1-208ENST00000522012 FBN3Q75N90 2809 aa16.34■□□□□ 0.21
R3HCC1-208ENST00000522012 IGHV3OR16-13A0A075B7E8 117 aa16.33■□□□□ 0.2
R3HCC1-208ENST00000522012 IGHV3-74A0A0B4J1X5 117 aa16.33■□□□□ 0.2
R3HCC1-208ENST00000522012 APOHP02749 345 aaPredicted RBP16.33■□□□□ 0.2
R3HCC1-208ENST00000522012 PQLC2Q6ZP29 291 aa16.33■□□□□ 0.2
R3HCC1-208ENST00000522012 NARS2Q96I59 477 aaKnown RBP16.33■□□□□ 0.2
R3HCC1-208ENST00000522012 OR51M1Q9H341 326 aa16.33■□□□□ 0.2
R3HCC1-208ENST00000522012 DAZ1Q9NQZ3 744 aaKnown RBP16.33■□□□□ 0.2
R3HCC1-208ENST00000522012 K7EMT4 169 aa16.32■□□□□ 0.2
R3HCC1-208ENST00000522012 GCHFRP30047 84 aa16.32■□□□□ 0.2
R3HCC1-208ENST00000522012 REC114Q7Z4M0 266 aa16.32■□□□□ 0.2
R3HCC1-208ENST00000522012 ZNF503Q96F45 646 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms