RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 SEC14L6B5MCN3 397 aa18.33■□□□□ 0.53
PVT1-212ENST00000521951 HNRNPCP07910 306 aaKnown RBP eCLIP18.33■□□□□ 0.539e-7■□□□□ 10
PVT1-212ENST00000521951 GNPNAT1Q96EK6 184 aaPredicted RBP18.33■□□□□ 0.53
PVT1-212ENST00000521951 PSMG3Q9BT73 122 aaPredicted RBP18.33■□□□□ 0.53
PVT1-212ENST00000521951 SH3BGRL3Q9H299 93 aa18.33■□□□□ 0.53
PVT1-212ENST00000521951 U3KQE9 123 aa18.33■□□□□ 0.53
PVT1-212ENST00000521951 IGHV3OR16-13A0A075B7E8 117 aa18.33■□□□□ 0.52
PVT1-212ENST00000521951 IGHV3-74A0A0B4J1X5 117 aa18.33■□□□□ 0.52
PVT1-212ENST00000521951 OR5G3P0C626 314 aa18.33■□□□□ 0.52
PVT1-212ENST00000521951 FFAR4Q5NUL3 377 aa18.33■□□□□ 0.52
PVT1-212ENST00000521951 PRR31Q5SQ13 230 aa18.33■□□□□ 0.52
PVT1-212ENST00000521951 TMEM37Q8WXS4 190 aa18.33■□□□□ 0.52
PVT1-212ENST00000521951 MARC2Q969Z3 335 aa18.33■□□□□ 0.52
PVT1-212ENST00000521951 HIGD1AQ9Y241 93 aa18.33■□□□□ 0.52
PVT1-212ENST00000521951 BOLA1Q9Y3E2 137 aa18.33■□□□□ 0.52
PVT1-212ENST00000521951 NOTCH3Q9UM47 2321 aa18.33■□□□□ 0.52
PVT1-212ENST00000521951 GCSAMLQ5JQS6 135 aa18.32■□□□□ 0.52
PVT1-212ENST00000521951 RHPN1-AS1Q9BWJ2 59 aa18.32■□□□□ 0.52
PVT1-212ENST00000521951 DNAJC4Q9NNZ3 241 aa18.32■□□□□ 0.52
PVT1-212ENST00000521951 SIGLEC8Q9NYZ4 499 aa18.32■□□□□ 0.52
PVT1-212ENST00000521951 CMYA5Q8N3K9 4069 aa18.32■□□□□ 0.52
PVT1-212ENST00000521951 CHEK1O14757 476 aa18.31■□□□□ 0.52
PVT1-212ENST00000521951 COX7A2P2O60397 106 aa18.31■□□□□ 0.52
PVT1-212ENST00000521951 SAP30O75446 220 aa18.31■□□□□ 0.52
PVT1-212ENST00000521951 C4BPBP20851 252 aa18.31■□□□□ 0.52
PVT1-212ENST00000521951 EIF5AP63241 154 aaKnown RBP18.31■□□□□ 0.52
PVT1-212ENST00000521951 OR1L4Q8NGR5 311 aa18.31■□□□□ 0.52
PVT1-212ENST00000521951 MCRIP2Q9BUT9 160 aaKnown RBP18.31■□□□□ 0.52
PVT1-212ENST00000521951 SLC25A32Q9H2D1 315 aa18.31■□□□□ 0.52
PVT1-212ENST00000521951 ELOA3CA0A087WX78 387 aaPredicted RBP18.3■□□□□ 0.52
PVT1-212ENST00000521951 IGHV3-66A0A0C4DH42 116 aa18.3■□□□□ 0.52
PVT1-212ENST00000521951 SLC51BQ86UW2 128 aa18.3■□□□□ 0.52
PVT1-212ENST00000521951 BAP18Q8IXM2 172 aa18.3■□□□□ 0.52
PVT1-212ENST00000521951 OR2G3Q8NGZ4 309 aa18.3■□□□□ 0.52
PVT1-212ENST00000521951 STOML3Q8TAV4 291 aa18.3■□□□□ 0.52
PVT1-212ENST00000521951 ST8SIA2Q92186 375 aa18.3■□□□□ 0.52
PVT1-212ENST00000521951 UHRF2Q96PU4 802 aa18.3■□□□□ 0.52
PVT1-212ENST00000521951 PFDN5Q99471 154 aa18.3■□□□□ 0.52
PVT1-212ENST00000521951 VSIRQ9H7M9 311 aa18.3■□□□□ 0.52
PVT1-212ENST00000521951 PKD1L1Q8TDX9 2849 aa18.3■□□□□ 0.52
PVT1-212ENST00000521951 TPT1P13693 172 aaKnown RBP18.29■□□□□ 0.52
PVT1-212ENST00000521951 IGLL1P15814 213 aa18.29■□□□□ 0.52
PVT1-212ENST00000521951 SERF2P84101 59 aa18.29■□□□□ 0.52
PVT1-212ENST00000521951 C10orf113Q5VZT2 155 aa18.29■□□□□ 0.52
PVT1-212ENST00000521951 PPP1R14BQ96C90 147 aa18.29■□□□□ 0.52
PVT1-212ENST00000521951 NARS2Q96I59 477 aaKnown RBP18.29■□□□□ 0.52
PVT1-212ENST00000521951 SLC25A39Q9BZJ4 359 aaPredicted RBP18.29■□□□□ 0.52
PVT1-212ENST00000521951 A0A1W2PS18 150 aa18.28■□□□□ 0.52
PVT1-212ENST00000521951 BUB3O43684 328 aa18.28■□□□□ 0.52
PVT1-212ENST00000521951 SPP1P10451 314 aa18.28■□□□□ 0.52
PVT1-212ENST00000521951 C9orf66Q5T8R8 295 aa18.28■□□□□ 0.52
PVT1-212ENST00000521951 GATAD1Q8WUU5 269 aa18.28■□□□□ 0.52
PVT1-212ENST00000521951 MLXQ9UH92 298 aa18.28■□□□□ 0.52
PVT1-212ENST00000521951 PFDN2Q9UHV9 154 aa18.28■□□□□ 0.52
PVT1-212ENST00000521951 SELENOKQ9Y6D0 94 aa18.28■□□□□ 0.52
PVT1-212ENST00000521951 DNHD1Q96M86 4753 aa18.28■□□□□ 0.52
PVT1-212ENST00000521951 H3BRN7 92 aa18.28■□□□□ 0.52
PVT1-212ENST00000521951 LINC00305Q7Z4B0 112 aa18.28■□□□□ 0.52
PVT1-212ENST00000521951 SHANK2-AS3Q9BTD1 123 aa18.28■□□□□ 0.52
PVT1-212ENST00000521951 ZNF98A6NK75 572 aa18.27■□□□□ 0.51
PVT1-212ENST00000521951 ACOT6Q3I5F7 207 aaPredicted RBP18.27■□□□□ 0.51
PVT1-212ENST00000521951 C16orf54Q6UWD8 224 aa18.27■□□□□ 0.51
PVT1-212ENST00000521951 DYNLRB2Q8TF09 96 aa18.27■□□□□ 0.51
PVT1-212ENST00000521951 SCRT1Q9BWW7 348 aa18.27■□□□□ 0.51
PVT1-212ENST00000521951 M6PRP20645 277 aa18.26■□□□□ 0.51
PVT1-212ENST00000521951 S100A7P31151 101 aa18.26■□□□□ 0.51
PVT1-212ENST00000521951 BMI1P35226 326 aa18.26■□□□□ 0.51
PVT1-212ENST00000521951 INSL3P51460 131 aa18.26■□□□□ 0.51
PVT1-212ENST00000521951 DEFB114Q30KQ6 69 aa18.26■□□□□ 0.51
PVT1-212ENST00000521951 S100A7AQ86SG5 101 aa18.26■□□□□ 0.51
PVT1-212ENST00000521951 GRAMD2BQ96HH9 432 aa18.26■□□□□ 0.51
PVT1-212ENST00000521951 RNF2Q99496 336 aa18.26■□□□□ 0.51
PVT1-212ENST00000521951 TMEM231Q9H6L2 316 aa18.26■□□□□ 0.51
PVT1-212ENST00000521951 TECRQ9NZ01 308 aaKnown RBP18.26■□□□□ 0.51
PVT1-212ENST00000521951 SEC11BP0C7V7 166 aa18.25■□□□□ 0.51
PVT1-212ENST00000521951 RAB2AP61019 212 aa18.25■□□□□ 0.51
PVT1-212ENST00000521951 MORN5Q5VZ52 161 aa18.25■□□□□ 0.51
PVT1-212ENST00000521951 LEMD1Q68G75 181 aa18.25■□□□□ 0.51
PVT1-212ENST00000521951 IGLV1-51P01701 117 aa18.24■□□□□ 0.51
PVT1-212ENST00000521951 C1orf194Q5T5A4 169 aa18.24■□□□□ 0.51
PVT1-212ENST00000521951 FAM78BQ5VT40 261 aa18.24■□□□□ 0.51
PVT1-212ENST00000521951 SLC25A22Q9H936 323 aa18.24■□□□□ 0.51
PVT1-212ENST00000521951 SEPSECSQ9HD40 501 aaKnown RBP18.24■□□□□ 0.51
PVT1-212ENST00000521951 MBP02144 154 aa18.23■□□□□ 0.51
PVT1-212ENST00000521951 SPATA31B1PQ5VZV4 182 aa18.23■□□□□ 0.51
PVT1-212ENST00000521951 OR10G4Q8NGN3 311 aa18.23■□□□□ 0.51
PVT1-212ENST00000521951 OR10G9Q8NGN4 311 aa18.23■□□□□ 0.51
PVT1-212ENST00000521951 OR10G7Q8NGN6 311 aa18.23■□□□□ 0.51
PVT1-212ENST00000521951 TMED6Q8WW62 240 aa18.23■□□□□ 0.51
PVT1-212ENST00000521951 GLMPQ8WWB7 406 aa18.23■□□□□ 0.51
PVT1-212ENST00000521951 PLA2G2EQ9NZK7 142 aa18.23■□□□□ 0.51
PVT1-212ENST00000521951 TRAV5A0A0B4J249 113 aa18.23■□□□□ 0.51
PVT1-212ENST00000521951 CD300EQ496F6 205 aaPredicted RBP18.23■□□□□ 0.51
PVT1-212ENST00000521951 OXLD1Q5BKU9 147 aa18.23■□□□□ 0.51
PVT1-212ENST00000521951 OR8I2Q8N0Y5 310 aa18.23■□□□□ 0.51
PVT1-212ENST00000521951 RPRMQ9NS64 109 aa18.23■□□□□ 0.51
PVT1-212ENST00000521951 RHOBP62745 196 aa18.22■□□□□ 0.51
PVT1-212ENST00000521951 TMEM41BQ5BJD5 291 aa18.22■□□□□ 0.51
PVT1-212ENST00000521951 AKR1C8PQ5T2L2 129 aa18.22■□□□□ 0.51
PVT1-212ENST00000521951 FAM90A2PQ658T7 463 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms