RNA–Protein interactions for RNA: ENST00000520700.1

TRAM1-203, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-203ENST00000520700 C1orf194Q5T5A4 169 aa13.14□□□□□ -0.31
TRAM1-203ENST00000520700 FAM90A2PQ658T7 463 aa13.14□□□□□ -0.31
TRAM1-203ENST00000520700 LCN12Q6JVE5 192 aa13.14□□□□□ -0.31
TRAM1-203ENST00000520700 S100A7AQ86SG5 101 aa13.14□□□□□ -0.31
TRAM1-203ENST00000520700 KCNRGQ8N5I3 272 aa13.14□□□□□ -0.31
TRAM1-203ENST00000520700 SCGB1C1Q8TD33 95 aa13.14□□□□□ -0.31
TRAM1-203ENST00000520700 DYNLRB2Q8TF09 96 aa13.14□□□□□ -0.31
TRAM1-203ENST00000520700 SMIM3Q9BZL3 60 aa13.14□□□□□ -0.31
TRAM1-203ENST00000520700 KCNIP2Q9NS61 270 aa13.14□□□□□ -0.31
TRAM1-203ENST00000520700 NOTCH1P46531 2555 aa13.13□□□□□ -0.31
TRAM1-203ENST00000520700 ELOA3CA0A087WX78 387 aaPredicted RBP13.13□□□□□ -0.31
TRAM1-203ENST00000520700 A0A0D9SG52 128 aa13.13□□□□□ -0.31
TRAM1-203ENST00000520700 C17orf112F2Z3M2 114 aa13.13□□□□□ -0.31
TRAM1-203ENST00000520700 LAMTOR1Q6IAA8 161 aa13.13□□□□□ -0.31
TRAM1-203ENST00000520700 C16orf54Q6UWD8 224 aa13.13□□□□□ -0.31
TRAM1-203ENST00000520700 Q6ZRG5 221 aa13.13□□□□□ -0.31
TRAM1-203ENST00000520700 STPG3Q8N7X2 389 aa13.13□□□□□ -0.31
TRAM1-203ENST00000520700 ST8SIA2Q92186 375 aa13.13□□□□□ -0.31
TRAM1-203ENST00000520700 GRAMD2BQ96HH9 432 aa13.13□□□□□ -0.31
TRAM1-203ENST00000520700 PBDC1Q9BVG4 233 aa13.13□□□□□ -0.31
TRAM1-203ENST00000520700 SLC39A9Q9NUM3 307 aa13.13□□□□□ -0.31
TRAM1-203ENST00000520700 TSPAN4O14817 238 aa13.12□□□□□ -0.31
TRAM1-203ENST00000520700 ORM2P19652 201 aa13.12□□□□□ -0.31
TRAM1-203ENST00000520700 B2MP61769 119 aa13.12□□□□□ -0.31
TRAM1-203ENST00000520700 MIC13Q5XKP0 118 aa13.12□□□□□ -0.31
TRAM1-203ENST00000520700 PATE2Q6UY27 113 aa13.12□□□□□ -0.31
TRAM1-203ENST00000520700 ZNF709Q8N972 641 aa13.12□□□□□ -0.31
TRAM1-203ENST00000520700 HYLS1Q96M11 299 aa13.12□□□□□ -0.31
TRAM1-203ENST00000520700 RNF2Q99496 336 aa13.12□□□□□ -0.31
TRAM1-203ENST00000520700 RNF24Q9Y225 148 aa13.12□□□□□ -0.31
TRAM1-203ENST00000520700 TIMM9Q9Y5J7 89 aa13.12□□□□□ -0.31
TRAM1-203ENST00000520700 ZNF785A8K8V0 405 aa13.11□□□□□ -0.31
TRAM1-203ENST00000520700 KRTAP10-11P60412 298 aa13.11□□□□□ -0.31
TRAM1-203ENST00000520700 TMEM61Q8N0U2 210 aa13.11□□□□□ -0.31
TRAM1-203ENST00000520700 OR1L4Q8NGR5 311 aa13.11□□□□□ -0.31
TRAM1-203ENST00000520700 OR1B1Q8NGR6 318 aa13.11□□□□□ -0.31
TRAM1-203ENST00000520700 GLMPQ8WWB7 406 aa13.11□□□□□ -0.31
TRAM1-203ENST00000520700 ARL6Q9H0F7 186 aa13.11□□□□□ -0.31
TRAM1-203ENST00000520700 DNAJC4Q9NNZ3 241 aa13.11□□□□□ -0.31
TRAM1-203ENST00000520700 HIGD1AQ9Y241 93 aa13.11□□□□□ -0.31
TRAM1-203ENST00000520700 PXMP4Q9Y6I8 212 aa13.11□□□□□ -0.31
TRAM1-203ENST00000520700 SORL1Q92673 2214 aa13.11□□□□□ -0.31
TRAM1-203ENST00000520700 IGHV3-49A0A0A0MS15 119 aa13.1□□□□□ -0.31
TRAM1-203ENST00000520700 BORCS7-ASMTA0A0B4J1R7 106 aa13.1□□□□□ -0.31
TRAM1-203ENST00000520700 JTBO76095 146 aa13.1□□□□□ -0.31
TRAM1-203ENST00000520700 CXCL2P19875 107 aa13.1□□□□□ -0.31
TRAM1-203ENST00000520700 RBPMS2Q6ZRY4 209 aaKnown RBP13.1□□□□□ -0.31
TRAM1-203ENST00000520700 GATAD1Q8WUU5 269 aa13.1□□□□□ -0.31
TRAM1-203ENST00000520700 TMEM37Q8WXS4 190 aa13.1□□□□□ -0.31
TRAM1-203ENST00000520700 PFDN5Q99471 154 aa13.1□□□□□ -0.31
TRAM1-203ENST00000520700 SPAG8Q99932 426 aaPredicted RBP13.1□□□□□ -0.31
TRAM1-203ENST00000520700 SHANK2-AS3Q9BTD1 123 aa13.1□□□□□ -0.31
TRAM1-203ENST00000520700 ARV1Q9H2C2 271 aa13.1□□□□□ -0.31
TRAM1-203ENST00000520700 CYTL1Q9NRR1 136 aa13.1□□□□□ -0.31
TRAM1-203ENST00000520700 ZNF256Q9Y2P7 627 aaPredicted RBP13.1□□□□□ -0.31
TRAM1-203ENST00000520700 IGHV3OR16-13A0A075B7E8 117 aa13.09□□□□□ -0.31
TRAM1-203ENST00000520700 IGHV3-74A0A0B4J1X5 117 aa13.09□□□□□ -0.31
TRAM1-203ENST00000520700 TRAV2A0A0B4J234 112 aa13.09□□□□□ -0.31
TRAM1-203ENST00000520700 IZUMO1RA6ND01 250 aa13.09□□□□□ -0.31
TRAM1-203ENST00000520700 HELTA6NFD8 242 aa13.09□□□□□ -0.31
TRAM1-203ENST00000520700 ZNF98A6NK75 572 aa13.09□□□□□ -0.31
TRAM1-203ENST00000520700 H3BRN7 92 aa13.09□□□□□ -0.31
TRAM1-203ENST00000520700 TCF24Q7RTU0 167 aa13.09□□□□□ -0.31
TRAM1-203ENST00000520700 GPR82Q96P67 336 aa13.09□□□□□ -0.31
TRAM1-203ENST00000520700 PSMG3Q9BT73 122 aaPredicted RBP13.09□□□□□ -0.31
TRAM1-203ENST00000520700 SLC25A39Q9BZJ4 359 aaPredicted RBP13.09□□□□□ -0.31
TRAM1-203ENST00000520700 DNAH3Q8TD57 4116 aa13.08□□□□□ -0.31
TRAM1-203ENST00000520700 OR5G3P0C626 314 aa13.08□□□□□ -0.32
TRAM1-203ENST00000520700 C10orf113Q5VZT2 155 aa13.08□□□□□ -0.32
TRAM1-203ENST00000520700 RPL7L1Q6DKI1 246 aaKnown RBP13.08□□□□□ -0.32
TRAM1-203ENST00000520700 OR2G3Q8NGZ4 309 aa13.08□□□□□ -0.32
TRAM1-203ENST00000520700 ARPC5LQ9BPX5 153 aa13.08□□□□□ -0.32
TRAM1-203ENST00000520700 RSG1Q9BU20 258 aa13.08□□□□□ -0.32
TRAM1-203ENST00000520700 IGHV3-66A0A0C4DH42 116 aa13.07□□□□□ -0.32
TRAM1-203ENST00000520700 COX7A2P2O60397 106 aa13.07□□□□□ -0.32
TRAM1-203ENST00000520700 GP9P14770 177 aa13.07□□□□□ -0.32
TRAM1-203ENST00000520700 SERF2P84101 59 aa13.07□□□□□ -0.32
TRAM1-203ENST00000520700 CD300CQ08708 224 aa13.07□□□□□ -0.32
TRAM1-203ENST00000520700 LGALSLQ3ZCW2 172 aaPredicted RBP13.07□□□□□ -0.32
TRAM1-203ENST00000520700 PPP1R14BQ96C90 147 aa13.07□□□□□ -0.32
TRAM1-203ENST00000520700 GNPNAT1Q96EK6 184 aaPredicted RBP13.07□□□□□ -0.32
TRAM1-203ENST00000520700 DOK5Q9P104 306 aa13.07□□□□□ -0.32
TRAM1-203ENST00000520700 ATP6V0CP27449 155 aa13.06□□□□□ -0.32
TRAM1-203ENST00000520700 PAFAH1B2P68402 229 aa13.06□□□□□ -0.32
TRAM1-203ENST00000520700 TMUB2Q71RG4 321 aa13.06□□□□□ -0.32
TRAM1-203ENST00000520700 LINC00305Q7Z4B0 112 aa13.06□□□□□ -0.32
TRAM1-203ENST00000520700 OR8I2Q8N0Y5 310 aa13.06□□□□□ -0.32
TRAM1-203ENST00000520700 SEPSECSQ9HD40 501 aaKnown RBP13.06□□□□□ -0.32
TRAM1-203ENST00000520700 KANTRA0A1W2PQU2 76 aa13.05□□□□□ -0.32
TRAM1-203ENST00000520700 BCL2L11O43521 198 aa13.05□□□□□ -0.32
TRAM1-203ENST00000520700 ZFP69Q49AA0 526 aa13.05□□□□□ -0.32
TRAM1-203ENST00000520700 SIGLEC15Q6ZMC9 328 aa13.05□□□□□ -0.32
TRAM1-203ENST00000520700 HSD17B11Q8NBQ5 300 aa13.05□□□□□ -0.32
TRAM1-203ENST00000520700 UHRF2Q96PU4 802 aa13.05□□□□□ -0.32
TRAM1-203ENST00000520700 FAM110AQ9BQ89 295 aa13.05□□□□□ -0.32
TRAM1-203ENST00000520700 OR4C46A6NHA9 309 aa13.04□□□□□ -0.32
TRAM1-203ENST00000520700 RPL7P18124 248 aaKnown RBP13.04□□□□□ -0.32
TRAM1-203ENST00000520700 CMC4P56277 68 aaPredicted RBP13.04□□□□□ -0.32
TRAM1-203ENST00000520700 GUCA2BQ16661 112 aa13.04□□□□□ -0.32
TRAM1-203ENST00000520700 FFAR4Q5NUL3 377 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms