RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 CENPWQ5EE01 88 aa4.03□□□□□ -1.76
SDC2-204ENST00000519914 SAMD13Q5VXD3 122 aa4.03□□□□□ -1.76
SDC2-204ENST00000519914 LYPD2Q6UXB3 125 aa4.03□□□□□ -1.76
SDC2-204ENST00000519914 GFRALQ6UXV0 394 aa4.03□□□□□ -1.76
SDC2-204ENST00000519914 ZNF841Q6ZN19 808 aa4.03□□□□□ -1.76
SDC2-204ENST00000519914 MOB3BQ86TA1 216 aa4.03□□□□□ -1.76
SDC2-204ENST00000519914 NIT1Q86X76 327 aa4.03□□□□□ -1.76
SDC2-204ENST00000519914 MMD2Q8IY49 270 aa4.03□□□□□ -1.76
SDC2-204ENST00000519914 TMEM116Q8NCL8 245 aa4.03□□□□□ -1.76
SDC2-204ENST00000519914 STXBP6Q8NFX7 210 aa4.03□□□□□ -1.76
SDC2-204ENST00000519914 OR10W1Q8NGF6 305 aa4.03□□□□□ -1.76
SDC2-204ENST00000519914 OR10X1Q8NGY0 326 aa4.03□□□□□ -1.76
SDC2-204ENST00000519914 MS4A10Q96PG2 267 aa4.03□□□□□ -1.76
SDC2-204ENST00000519914 TMEM133Q9H2Q1 129 aa4.03□□□□□ -1.76
SDC2-204ENST00000519914 FNDC4Q9H6D8 234 aaPredicted RBP4.03□□□□□ -1.76
SDC2-204ENST00000519914 ZNRD1Q9P1U0 126 aa4.03□□□□□ -1.76
SDC2-204ENST00000519914 TP53TG3Q9ULZ0 132 aa4.03□□□□□ -1.76
SDC2-204ENST00000519914 RNF24Q9Y225 148 aa4.03□□□□□ -1.76
SDC2-204ENST00000519914 LAMTOR2Q9Y2Q5 125 aa4.03□□□□□ -1.76
SDC2-204ENST00000519914 AMMECR1Q9Y4X0 333 aaPredicted RBP4.03□□□□□ -1.76
SDC2-204ENST00000519914 KLF12Q9Y4X4 402 aa4.03□□□□□ -1.76
SDC2-204ENST00000519914 NAV3Q8IVL0 2385 aa4.02□□□□□ -1.77
SDC2-204ENST00000519914 IGHV1-69-2A0A0G2JMI3 117 aa4.02□□□□□ -1.77
SDC2-204ENST00000519914 TRBV6-1A0A0K0K1D8 114 aa4.02□□□□□ -1.77
SDC2-204ENST00000519914 A0A1W2PPI3 338 aa4.02□□□□□ -1.77
SDC2-204ENST00000519914 PGPEP1LA6NFU8 196 aa4.02□□□□□ -1.77
SDC2-204ENST00000519914 LY6LH3BQJ8 138 aa4.02□□□□□ -1.77
SDC2-204ENST00000519914 CRYBB3P26998 211 aa4.02□□□□□ -1.77
SDC2-204ENST00000519914 SUMO1P63165 101 aaKnown RBP4.02□□□□□ -1.77
SDC2-204ENST00000519914 ZNF90Q03938 601 aa4.02□□□□□ -1.77
SDC2-204ENST00000519914 C5orf64Q2M2E5 130 aa4.02□□□□□ -1.77
SDC2-204ENST00000519914 KRTAP15-1Q3LI76 137 aa4.02□□□□□ -1.77
SDC2-204ENST00000519914 TIGITQ495A1 244 aa4.02□□□□□ -1.77
SDC2-204ENST00000519914 PDZD11Q5EBL8 140 aa4.02□□□□□ -1.77
SDC2-204ENST00000519914 CT83Q5H943 113 aa4.02□□□□□ -1.77
SDC2-204ENST00000519914 OR10J3Q5JRS4 329 aa4.02□□□□□ -1.77
SDC2-204ENST00000519914 PATE2Q6UY27 113 aa4.02□□□□□ -1.77
SDC2-204ENST00000519914 TMEM136Q6ZRR5 245 aa4.02□□□□□ -1.77
SDC2-204ENST00000519914 GTF2H5Q6ZYL4 71 aa4.02□□□□□ -1.77
SDC2-204ENST00000519914 ZNF329Q86UD4 541 aa4.02□□□□□ -1.77
SDC2-204ENST00000519914 LY6G5BQ8NDX9 201 aa4.02□□□□□ -1.77
SDC2-204ENST00000519914 OR2T6Q8NHC8 308 aa4.02□□□□□ -1.77
SDC2-204ENST00000519914 RND1Q92730 232 aa4.02□□□□□ -1.77
SDC2-204ENST00000519914 FXYD5Q96DB9 178 aa4.02□□□□□ -1.77
SDC2-204ENST00000519914 TBX15Q96SF7 602 aa4.02□□□□□ -1.77
SDC2-204ENST00000519914 ATP6V0BQ99437 205 aa4.02□□□□□ -1.77
SDC2-204ENST00000519914 CHRDL1Q9BU40 450 aa4.02□□□□□ -1.77
SDC2-204ENST00000519914 PAXXQ9BUH6 204 aa4.02□□□□□ -1.77
SDC2-204ENST00000519914 HINT2Q9BX68 163 aa4.02□□□□□ -1.77
SDC2-204ENST00000519914 TMEM14CQ9P0S9 112 aa4.02□□□□□ -1.77
SDC2-204ENST00000519914 RALYQ9UKM9 306 aaKnown RBP4.02□□□□□ -1.77
SDC2-204ENST00000519914 ACACAQ13085 2346 aa4.02□□□□□ -1.77
SDC2-204ENST00000519914 FRYQ5TBA9 3013 aa4.02□□□□□ -1.77
SDC2-204ENST00000519914 PCNX1Q96RV3 2341 aa4.02□□□□□ -1.77
SDC2-204ENST00000519914 IGHV2-26A0A0B4J1V2 119 aa4.01□□□□□ -1.77
SDC2-204ENST00000519914 IZUMO1RA6ND01 250 aa4.01□□□□□ -1.77
SDC2-204ENST00000519914 OR11H12B2RN74 326 aa4.01□□□□□ -1.77
SDC2-204ENST00000519914 TEX22C9J3V5 150 aa4.01□□□□□ -1.77
SDC2-204ENST00000519914 PEX7O00628 323 aa4.01□□□□□ -1.77
SDC2-204ENST00000519914 PLXNB1O43157 2135 aa4.01□□□□□ -1.77
SDC2-204ENST00000519914 OR7C2O60412 319 aa4.01□□□□□ -1.77
SDC2-204ENST00000519914 ACTL6BO94805 426 aa4.01□□□□□ -1.77
SDC2-204ENST00000519914 HLA-DQA1P01909 254 aa4.01□□□□□ -1.77
SDC2-204ENST00000519914 AMY1AP04745 511 aa4.01□□□□□ -1.77
SDC2-204ENST00000519914 GATA2P23769 480 aaPredicted RBP4.01□□□□□ -1.77
SDC2-204ENST00000519914 CA7P43166 264 aa4.01□□□□□ -1.77
SDC2-204ENST00000519914 RPL27AP46776 148 aaKnown RBP4.01□□□□□ -1.77
SDC2-204ENST00000519914 HNRNPA3P51991 378 aaKnown RBP4.01□□□□□ -1.77
SDC2-204ENST00000519914 MFAP2P55001 183 aa4.01□□□□□ -1.77
SDC2-204ENST00000519914 UBE2L3P68036 154 aaKnown RBP4.01□□□□□ -1.77
SDC2-204ENST00000519914 DIAPH2-AS1Q14236 149 aa4.01□□□□□ -1.77
SDC2-204ENST00000519914 VAMP3Q15836 100 aa4.01□□□□□ -1.77
SDC2-204ENST00000519914 PMCHL1Q16048 86 aa4.01□□□□□ -1.77
SDC2-204ENST00000519914 CLEC12BQ2HXU8 276 aa4.01□□□□□ -1.77
SDC2-204ENST00000519914 TCTEX1D4Q5JR98 221 aa4.01□□□□□ -1.77
SDC2-204ENST00000519914 C10orf113Q5VZT2 155 aa4.01□□□□□ -1.77
SDC2-204ENST00000519914 MRPL54Q6P161 138 aaKnown RBP4.01□□□□□ -1.77
SDC2-204ENST00000519914 ATP5L2Q7Z4Y8 100 aa4.01□□□□□ -1.77
SDC2-204ENST00000519914 OR11H1Q8NG94 326 aa4.01□□□□□ -1.77
SDC2-204ENST00000519914 OR5AU1Q8NGC0 362 aa4.01□□□□□ -1.77
SDC2-204ENST00000519914 OR1L6Q8NGR2 347 aa4.01□□□□□ -1.77
SDC2-204ENST00000519914 OR11H2Q8NH07 326 aa4.01□□□□□ -1.77
SDC2-204ENST00000519914 CMTM2Q8TAZ6 248 aa4.01□□□□□ -1.77
SDC2-204ENST00000519914 CCL17Q92583 94 aa4.01□□□□□ -1.77
SDC2-204ENST00000519914 NPIPB3Q92617 1050 aa4.01□□□□□ -1.77
SDC2-204ENST00000519914 PERPQ96FX8 193 aa4.01□□□□□ -1.77
SDC2-204ENST00000519914 GRAMD2BQ96HH9 432 aa4.01□□□□□ -1.77
SDC2-204ENST00000519914 ZNF479Q96JC4 524 aa4.01□□□□□ -1.77
SDC2-204ENST00000519914 MLST8Q9BVC4 326 aa4.01□□□□□ -1.77
SDC2-204ENST00000519914 DYNLRB1Q9NP97 96 aa4.01□□□□□ -1.77
SDC2-204ENST00000519914 ZNF355PQ9NSJ1 428 aa4.01□□□□□ -1.77
SDC2-204ENST00000519914 MRPL36Q9P0J6 103 aaKnown RBP4.01□□□□□ -1.77
SDC2-204ENST00000519914 ZNF492Q9P255 531 aa4.01□□□□□ -1.77
SDC2-204ENST00000519914 SIGLEC9Q9Y336 463 aa4.01□□□□□ -1.77
SDC2-204ENST00000519914 F11RQ9Y624 299 aaKnown RBP4.01□□□□□ -1.77
SDC2-204ENST00000519914 BAHCC1Q9P281 2608 aa4.01□□□□□ -1.77
SDC2-204ENST00000519914 LOC105371242A0A075B767 164 aa4□□□□□ -1.77
SDC2-204ENST00000519914 IGHV1-3A0A0C4DH29 117 aa4□□□□□ -1.77
SDC2-204ENST00000519914 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4□□□□□ -1.77
SDC2-204ENST00000519914 FAM231BA6NCW3 169 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms