RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 A0A0J9YWU9 116 aa9.74□□□□□ -0.85
VEGFA-219ENST00000518824 UBE2CO00762 179 aa9.74□□□□□ -0.85
VEGFA-219ENST00000518824 ORM2P19652 201 aa9.74□□□□□ -0.85
VEGFA-219ENST00000518824 TAS2R30P59541 319 aa9.74□□□□□ -0.85
VEGFA-219ENST00000518824 DLK1P80370 383 aa9.74□□□□□ -0.85
VEGFA-219ENST00000518824 RAB32Q13637 225 aa9.74□□□□□ -0.85
VEGFA-219ENST00000518824 TRPT1Q86TN4 253 aaKnown RBP9.74□□□□□ -0.85
VEGFA-219ENST00000518824 SLC25A32Q9H2D1 315 aa9.74□□□□□ -0.85
VEGFA-219ENST00000518824 NRN1Q9NPD7 142 aa9.74□□□□□ -0.85
VEGFA-219ENST00000518824 INMT-MINDY4F8WBC2 141 aa9.73□□□□□ -0.85
VEGFA-219ENST00000518824 SOCS3O14543 225 aa9.73□□□□□ -0.85
VEGFA-219ENST00000518824 C4BPBP20851 252 aa9.73□□□□□ -0.85
VEGFA-219ENST00000518824 SLC38A11Q08AI6 406 aa9.73□□□□□ -0.85
VEGFA-219ENST00000518824 ACTL10Q5JWF8 245 aa9.73□□□□□ -0.85
VEGFA-219ENST00000518824 GDF5OSQ5U4N7 250 aa9.73□□□□□ -0.85
VEGFA-219ENST00000518824 OR10P1Q8NGE3 313 aa9.73□□□□□ -0.85
VEGFA-219ENST00000518824 OR1B1Q8NGR6 318 aa9.73□□□□□ -0.85
VEGFA-219ENST00000518824 PPP1R14BQ96C90 147 aa9.73□□□□□ -0.85
VEGFA-219ENST00000518824 SCRT1Q9BWW7 348 aa9.73□□□□□ -0.85
VEGFA-219ENST00000518824 SLC25A22Q9H936 323 aa9.73□□□□□ -0.85
VEGFA-219ENST00000518824 TP53TG1Q9Y2A0 90 aa9.73□□□□□ -0.85
VEGFA-219ENST00000518824 IGSF23A1L1A6 192 aa9.72□□□□□ -0.85
VEGFA-219ENST00000518824 ZNF98A6NK75 572 aa9.72□□□□□ -0.85
VEGFA-219ENST00000518824 L7N2F9 121 aa9.72□□□□□ -0.85
VEGFA-219ENST00000518824 CST7O76096 145 aa9.72□□□□□ -0.85
VEGFA-219ENST00000518824 CA1P00915 261 aaPredicted RBP9.72□□□□□ -0.85
VEGFA-219ENST00000518824 FABP1P07148 127 aa9.72□□□□□ -0.85
VEGFA-219ENST00000518824 BCAP31P51572 246 aa9.72□□□□□ -0.85
VEGFA-219ENST00000518824 AP2S1P53680 142 aaPredicted RBP9.72□□□□□ -0.85
VEGFA-219ENST00000518824 S100A10P60903 97 aa9.72□□□□□ -0.85
VEGFA-219ENST00000518824 VAMP2P63027 116 aa9.72□□□□□ -0.85
VEGFA-219ENST00000518824 PATE2Q6UY27 113 aa9.72□□□□□ -0.85
VEGFA-219ENST00000518824 STHQ8IWL8 128 aa9.72□□□□□ -0.85
VEGFA-219ENST00000518824 BPIFCQ8NFQ6 507 aa9.72□□□□□ -0.85
VEGFA-219ENST00000518824 C20orf173Q96LM9 149 aa9.72□□□□□ -0.85
VEGFA-219ENST00000518824 TENM2Q9NT68 2774 aa9.72□□□□□ -0.85
VEGFA-219ENST00000518824 DYNC2H1Q8NCM8 4307 aaKnown RBP9.72□□□□□ -0.85
VEGFA-219ENST00000518824 H3BRN7 92 aa9.71□□□□□ -0.86
VEGFA-219ENST00000518824 GOSR2O14653 212 aa9.71□□□□□ -0.86
VEGFA-219ENST00000518824 LINC00869P0C866 280 aa9.71□□□□□ -0.86
VEGFA-219ENST00000518824 PRB4P10163 310 aaPredicted RBP9.71□□□□□ -0.86
VEGFA-219ENST00000518824 CAV2P51636 162 aa9.71□□□□□ -0.86
VEGFA-219ENST00000518824 OR8I2Q8N0Y5 310 aa9.71□□□□□ -0.86
VEGFA-219ENST00000518824 TMEM217Q8N7C4 229 aa9.71□□□□□ -0.86
VEGFA-219ENST00000518824 UHRF2Q96PU4 802 aa9.71□□□□□ -0.86
VEGFA-219ENST00000518824 MGST2Q99735 147 aa9.71□□□□□ -0.86
VEGFA-219ENST00000518824 MARVELD1Q9BSK0 173 aa9.71□□□□□ -0.86
VEGFA-219ENST00000518824 NPVFQ9HCQ7 196 aa9.71□□□□□ -0.86
VEGFA-219ENST00000518824 CLEC5AQ9NY25 188 aa9.71□□□□□ -0.86
VEGFA-219ENST00000518824 H0YIZ8 118 aa9.7□□□□□ -0.86
VEGFA-219ENST00000518824 DEFB4AO15263 64 aa9.7□□□□□ -0.86
VEGFA-219ENST00000518824 DEDDO75618 318 aa9.7□□□□□ -0.86
VEGFA-219ENST00000518824 C1orf194Q5T5A4 169 aa9.7□□□□□ -0.86
VEGFA-219ENST00000518824 IGFL4Q6B9Z1 124 aa9.7□□□□□ -0.86
VEGFA-219ENST00000518824 IL17DQ8TAD2 202 aa9.7□□□□□ -0.86
VEGFA-219ENST00000518824 LINC00052Q96N35 136 aa9.7□□□□□ -0.86
VEGFA-219ENST00000518824 RSG1Q9BU20 258 aa9.7□□□□□ -0.86
VEGFA-219ENST00000518824 TMEM147Q9BVK8 224 aa9.7□□□□□ -0.86
VEGFA-219ENST00000518824 SLC25A39Q9BZJ4 359 aaPredicted RBP9.7□□□□□ -0.86
VEGFA-219ENST00000518824 MGAT4CQ9UBM8 478 aa9.7□□□□□ -0.86
VEGFA-219ENST00000518824 SLC45A2Q9UMX9 530 aa9.7□□□□□ -0.86
VEGFA-219ENST00000518824 FNDC10F2Z333 226 aa9.69□□□□□ -0.86
VEGFA-219ENST00000518824 F6UB75 175 aa9.69□□□□□ -0.86
VEGFA-219ENST00000518824 H3BMM0 161 aa9.69□□□□□ -0.86
VEGFA-219ENST00000518824 AGPAT2O15120 278 aa9.69□□□□□ -0.86
VEGFA-219ENST00000518824 CFDP00746 253 aaPredicted RBP9.69□□□□□ -0.86
VEGFA-219ENST00000518824 PLP1P60201 277 aa9.69□□□□□ -0.86
VEGFA-219ENST00000518824 MORN5Q5VZ52 161 aa9.69□□□□□ -0.86
VEGFA-219ENST00000518824 TEPPQ6URK8 271 aa9.69□□□□□ -0.86
VEGFA-219ENST00000518824 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.69□□□□□ -0.86
VEGFA-219ENST00000518824 TMEM252Q8N6L7 170 aa9.69□□□□□ -0.86
VEGFA-219ENST00000518824 OR11H2Q8NH07 326 aa9.69□□□□□ -0.86
VEGFA-219ENST00000518824 RARRES2Q99969 163 aa9.69□□□□□ -0.86
VEGFA-219ENST00000518824 SHANK2-AS3Q9BTD1 123 aa9.69□□□□□ -0.86
VEGFA-219ENST00000518824 ARL6Q9H0F7 186 aa9.69□□□□□ -0.86
VEGFA-219ENST00000518824 GPN1Q9HCN4 374 aaPredicted RBP9.69□□□□□ -0.86
VEGFA-219ENST00000518824 OR5AC2Q9NZP5 309 aa9.69□□□□□ -0.86
VEGFA-219ENST00000518824 TRAV8-2A0A0B4J237 113 aa9.68□□□□□ -0.86
VEGFA-219ENST00000518824 HYPMO75409 117 aa9.68□□□□□ -0.86
VEGFA-219ENST00000518824 IGKV3-20P01619 116 aa9.68□□□□□ -0.86
VEGFA-219ENST00000518824 SNRPCP09234 159 aaKnown RBP9.68□□□□□ -0.86
VEGFA-219ENST00000518824 OR5G3P0C626 314 aa9.68□□□□□ -0.86
VEGFA-219ENST00000518824 NUP62P37198 522 aaPredicted RBP9.68□□□□□ -0.86
VEGFA-219ENST00000518824 H2BFSP57053 126 aa9.68□□□□□ -0.86
VEGFA-219ENST00000518824 FXYD7P58549 80 aa9.68□□□□□ -0.86
VEGFA-219ENST00000518824 SNRPD3P62318 126 aaKnown RBP9.68□□□□□ -0.86
VEGFA-219ENST00000518824 PMS2P11Q13670 270 aa9.68□□□□□ -0.86
VEGFA-219ENST00000518824 LRRC37A5PQ49AS3 106 aa9.68□□□□□ -0.86
VEGFA-219ENST00000518824 CSNK1G2-AS1Q8NCQ2 148 aa9.68□□□□□ -0.86
VEGFA-219ENST00000518824 LYRM2Q9NU23 88 aaPredicted RBP9.68□□□□□ -0.86
VEGFA-219ENST00000518824 FBXL17Q9UF56 701 aa9.68□□□□□ -0.86
VEGFA-219ENST00000518824 HIGD1AQ9Y241 93 aa9.68□□□□□ -0.86
VEGFA-219ENST00000518824 PRAF2O60831 178 aa9.67□□□□□ -0.86
VEGFA-219ENST00000518824 HLA-DRB4P13762 266 aa9.67□□□□□ -0.86
VEGFA-219ENST00000518824 HLA-DMBP28068 263 aa9.67□□□□□ -0.86
VEGFA-219ENST00000518824 DEFA1P59665 94 aa9.67□□□□□ -0.86
VEGFA-219ENST00000518824 DEFA3P59666 94 aa9.67□□□□□ -0.86
VEGFA-219ENST00000518824 NHLH2Q02577 135 aa9.67□□□□□ -0.86
VEGFA-219ENST00000518824 MIC13Q5XKP0 118 aa9.67□□□□□ -0.86
VEGFA-219ENST00000518824 GATAD1Q8WUU5 269 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms