RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 ELOA3CA0A087WX78 387 aaPredicted RBP15.94■□□□□ 0.14
LSM6-207ENST00000515311 IGHV7-4-1A0A0J9YVY3 117 aa15.94■□□□□ 0.14
LSM6-207ENST00000515311 BOLA2-SMG1P6H3BVE0 249 aa15.94■□□□□ 0.14
LSM6-207ENST00000515311 HNRNPCP07910 306 aaKnown RBP eCLIP15.94■□□□□ 0.14
LSM6-207ENST00000515311 FOLR2P14207 255 aa15.94■□□□□ 0.14
LSM6-207ENST00000515311 S100A7P31151 101 aa15.94■□□□□ 0.14
LSM6-207ENST00000515311 S100A7AQ86SG5 101 aa15.94■□□□□ 0.14
LSM6-207ENST00000515311 OR1B1Q8NGR6 318 aa15.94■□□□□ 0.14
LSM6-207ENST00000515311 OR2G3Q8NGZ4 309 aa15.94■□□□□ 0.14
LSM6-207ENST00000515311 STOML3Q8TAV4 291 aa15.94■□□□□ 0.14
LSM6-207ENST00000515311 PFDN5Q99471 154 aa15.94■□□□□ 0.14
LSM6-207ENST00000515311 SMPXQ9UHP9 88 aa15.94■□□□□ 0.14
LSM6-207ENST00000515311 U3KQE9 123 aa15.94■□□□□ 0.14
LSM6-207ENST00000515311 TRRAPQ9Y4A5 3859 aa15.93■□□□□ 0.14
LSM6-207ENST00000515311 SEC14L6B5MCN3 397 aa15.93■□□□□ 0.14
LSM6-207ENST00000515311 COX7A2P2O60397 106 aa15.93■□□□□ 0.14
LSM6-207ENST00000515311 BMI1P35226 326 aa15.93■□□□□ 0.14
LSM6-207ENST00000515311 SERF2P84101 59 aa15.93■□□□□ 0.14
LSM6-207ENST00000515311 ADAMTSL5Q6ZMM2 481 aa15.93■□□□□ 0.14
LSM6-207ENST00000515311 OR1L4Q8NGR5 311 aa15.93■□□□□ 0.14
LSM6-207ENST00000515311 NARS2Q96I59 477 aaKnown RBP15.93■□□□□ 0.14
LSM6-207ENST00000515311 HIGD1AQ9Y241 93 aa15.93■□□□□ 0.14
LSM6-207ENST00000515311 A0A1W2PS18 150 aa15.92■□□□□ 0.14
LSM6-207ENST00000515311 TPT1P13693 172 aaKnown RBP15.92■□□□□ 0.14
LSM6-207ENST00000515311 FFAR4Q5NUL3 377 aa15.92■□□□□ 0.14
LSM6-207ENST00000515311 PATE2Q6UY27 113 aa15.92■□□□□ 0.14
LSM6-207ENST00000515311 SLC51BQ86UW2 128 aa15.92■□□□□ 0.14
LSM6-207ENST00000515311 SH3BGRL3Q9H299 93 aa15.92■□□□□ 0.14
LSM6-207ENST00000515311 TMEM231Q9H6L2 316 aa15.92■□□□□ 0.14
LSM6-207ENST00000515311 DNAJC4Q9NNZ3 241 aa15.92■□□□□ 0.14
LSM6-207ENST00000515311 DOK5Q9P104 306 aa15.92■□□□□ 0.14
LSM6-207ENST00000515311 OR5G3P0C626 314 aa15.91■□□□□ 0.14
LSM6-207ENST00000515311 SPP1P10451 314 aa15.91■□□□□ 0.14
LSM6-207ENST00000515311 EDN2P20800 178 aa15.91■□□□□ 0.14
LSM6-207ENST00000515311 INSL3P51460 131 aa15.91■□□□□ 0.14
LSM6-207ENST00000515311 C9orf66Q5T8R8 295 aa15.91■□□□□ 0.14
LSM6-207ENST00000515311 C10orf113Q5VZT2 155 aa15.91■□□□□ 0.14
LSM6-207ENST00000515311 BAP18Q8IXM2 172 aa15.91■□□□□ 0.14
LSM6-207ENST00000515311 GATAD1Q8WUU5 269 aa15.91■□□□□ 0.14
LSM6-207ENST00000515311 TMEM37Q8WXS4 190 aa15.91■□□□□ 0.14
LSM6-207ENST00000515311 RHPN1-AS1Q9BWJ2 59 aa15.91■□□□□ 0.14
LSM6-207ENST00000515311 VSIRQ9H7M9 311 aa15.91■□□□□ 0.14
LSM6-207ENST00000515311 RFNGQ9Y644 331 aa15.91■□□□□ 0.14
LSM6-207ENST00000515311 CHEK1O14757 476 aa15.9■□□□□ 0.14
LSM6-207ENST00000515311 SAP30O75446 220 aa15.9■□□□□ 0.14
LSM6-207ENST00000515311 APOHP02749 345 aaPredicted RBP15.9■□□□□ 0.14
LSM6-207ENST00000515311 GRAMD2BQ96HH9 432 aa15.9■□□□□ 0.14
LSM6-207ENST00000515311 SHANK2-AS3Q9BTD1 123 aa15.9■□□□□ 0.14
LSM6-207ENST00000515311 SLC25A39Q9BZJ4 359 aaPredicted RBP15.9■□□□□ 0.14
LSM6-207ENST00000515311 GPR61Q9BZJ8 451 aa15.9■□□□□ 0.14
LSM6-207ENST00000515311 SLC25A32Q9H2D1 315 aa15.9■□□□□ 0.14
LSM6-207ENST00000515311 TECRQ9NZ01 308 aaKnown RBP15.9■□□□□ 0.14
LSM6-207ENST00000515311 RNF24Q9Y225 148 aa15.9■□□□□ 0.14
LSM6-207ENST00000515311 IGHV3-49A0A0A0MS15 119 aa15.89■□□□□ 0.13
LSM6-207ENST00000515311 H3BRN7 92 aa15.89■□□□□ 0.13
LSM6-207ENST00000515311 BUB3O43684 328 aa15.89■□□□□ 0.13
LSM6-207ENST00000515311 C1orf194Q5T5A4 169 aa15.89■□□□□ 0.13
LSM6-207ENST00000515311 ST8SIA2Q92186 375 aa15.89■□□□□ 0.13
LSM6-207ENST00000515311 MLXQ9UH92 298 aa15.89■□□□□ 0.13
LSM6-207ENST00000515311 WIPF1O43516 503 aa15.88■□□□□ 0.13
LSM6-207ENST00000515311 MBP02144 154 aa15.88■□□□□ 0.13
LSM6-207ENST00000515311 SEC11BP0C7V7 166 aa15.88■□□□□ 0.13
LSM6-207ENST00000515311 M6PRP20645 277 aa15.88■□□□□ 0.13
LSM6-207ENST00000515311 ACOT6Q3I5F7 207 aaPredicted RBP15.88■□□□□ 0.13
LSM6-207ENST00000515311 GCSAMLQ5JQS6 135 aa15.88■□□□□ 0.13
LSM6-207ENST00000515311 LINC00305Q7Z4B0 112 aa15.88■□□□□ 0.13
LSM6-207ENST00000515311 DYNLRB2Q8TF09 96 aa15.88■□□□□ 0.13
LSM6-207ENST00000515311 UHRF2Q96PU4 802 aa15.88■□□□□ 0.13
LSM6-207ENST00000515311 RNF2Q99496 336 aa15.88■□□□□ 0.13
LSM6-207ENST00000515311 IGHV3OR16-13A0A075B7E8 117 aa15.87■□□□□ 0.13
LSM6-207ENST00000515311 IGHV3-74A0A0B4J1X5 117 aa15.87■□□□□ 0.13
LSM6-207ENST00000515311 ZNF98A6NK75 572 aa15.87■□□□□ 0.13
LSM6-207ENST00000515311 IGLV1-51P01701 117 aa15.87■□□□□ 0.13
LSM6-207ENST00000515311 CD5P06127 495 aa15.87■□□□□ 0.13
LSM6-207ENST00000515311 IGLL1P15814 213 aa15.87■□□□□ 0.13
LSM6-207ENST00000515311 DEFB114Q30KQ6 69 aa15.87■□□□□ 0.13
LSM6-207ENST00000515311 C16orf54Q6UWD8 224 aa15.87■□□□□ 0.13
LSM6-207ENST00000515311 SCRT1Q9BWW7 348 aa15.87■□□□□ 0.13
LSM6-207ENST00000515311 IGHV3-66A0A0C4DH42 116 aa15.86■□□□□ 0.13
LSM6-207ENST00000515311 EIF5AL1Q6IS14 154 aaKnown RBP15.86■□□□□ 0.13
LSM6-207ENST00000515311 OR2K2Q8NGT1 345 aa15.86■□□□□ 0.13
LSM6-207ENST00000515311 GLMPQ8WWB7 406 aa15.86■□□□□ 0.13
LSM6-207ENST00000515311 MRPL32Q9BYC8 188 aaKnown RBP15.86■□□□□ 0.13
LSM6-207ENST00000515311 RAB2AP61019 212 aa15.85■□□□□ 0.13
LSM6-207ENST00000515311 RHOBP62745 196 aa15.85■□□□□ 0.13
LSM6-207ENST00000515311 TMEM41BQ5BJD5 291 aa15.85■□□□□ 0.13
LSM6-207ENST00000515311 FAM78BQ5VT40 261 aa15.85■□□□□ 0.13
LSM6-207ENST00000515311 GPR82Q96P67 336 aa15.85■□□□□ 0.13
LSM6-207ENST00000515311 SEPSECSQ9HD40 501 aaKnown RBP15.85■□□□□ 0.13
LSM6-207ENST00000515311 NOTCH3Q9UM47 2321 aa15.85■□□□□ 0.13
LSM6-207ENST00000515311 HELTA6NFD8 242 aa15.84■□□□□ 0.13
LSM6-207ENST00000515311 LCE2DQ5TA82 110 aaPredicted RBP15.84■□□□□ 0.13
LSM6-207ENST00000515311 FAM90A2PQ658T7 463 aa15.84■□□□□ 0.13
LSM6-207ENST00000515311 OR8I2Q8N0Y5 310 aa15.84■□□□□ 0.13
LSM6-207ENST00000515311 OR10G4Q8NGN3 311 aa15.84■□□□□ 0.13
LSM6-207ENST00000515311 OR10G9Q8NGN4 311 aa15.84■□□□□ 0.13
LSM6-207ENST00000515311 OR10G7Q8NGN6 311 aa15.84■□□□□ 0.13
LSM6-207ENST00000515311 TMED6Q8WW62 240 aa15.84■□□□□ 0.13
LSM6-207ENST00000515311 FUT9Q9Y231 359 aa15.84■□□□□ 0.13
LSM6-207ENST00000515311 TRAV25A0A0B4J276 109 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms